Danio rerio (zebrafish): 563394
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Entry
563394 CDS
T01004
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2
KO
K15200
general transcription factor 3C polypeptide 2
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
563394 (gtf3c2)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
563394 (gtf3c2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WDR55
Beta-prop_TEP1_2nd
PEP5_VPS11_N
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
563394
NCBI-ProteinID:
NP_001038483
ZFIN:
ZDB-GENE-041014-349
Ensembl:
ENSDARG00000004574
UniProt:
Q5RHA2
LinkDB
All DBs
Position
20:41823351..41865417
Genome browser
AA seq
830 aa
AA seq
DB search
MAAGALNLGKLMGEKMGLPCEKDTDDRPGHFNHEGKEESEDSKPKKIKADTQLSEQAPCS
QVSSGVDQENSFNVEQTKKNEELKAKTPAKRRKKEIIPQTTPQQDVPALTDTSELASSGR
PKRRAAKVALDYLHSLAKDIGTPSESSTPARPKSGEAVVTSQKKKPARSRGVKRKAPDSD
SDCDGDEDFAPEKDDVEAESDEEDSEDSEPDVSLTMPRRGKQARGSYQCLLPNGLANNVM
EPVWNSFSRHKNRDENFSPWVFPEWIPSARDWHFLSNSEAEKYLPQEKESASFTFTREKI
NQPIQLQTVKRFESLPHHPERWDSLFFVGGPVRAMEWCPCPDGAEKKQYAAIYCHKGMDD
THQITKLYSGPALLQLWDLGDLQCKERPSTTPHLAYALAIDDGYIWNIKWCPAGAWELPS
TSRKAPQMPRLGVLAATFANGTIGVYSLPHPEALEKHYQSKDQHFMGCFMLFLQVKKLLS
LKMGSNQADHKAQSLVGLWDLSSKSTLLRVRCPDGGVSLYPYHCFHAHDENIRTLSWCKA
SSHLLVTVGDDRMAKMWDVRKTHTPLLAVKRCLSPEVYWPLLWSGFLMAQECCFATYGQH
GIHYFDSGYLGIKPFFVCPRKATIWSLSMSDWINAFAIVDNGGDCLFSCLPEMDMDPSNL
RRRRFSVYRTDMVQFEAGQRTAGEEQAEEETEDKTSIPGREPLTYRGAVKKNFLHFHDLD
MGNFSKCENRPMMKHLQQHELKGAAKVDQMPLSALYKVRFNPNMDAYNWLLSGGQSGLVR
VNCARGLSCSIMMKELREAQAQFSAMFQSREPDDSVTAVRHSTADTVQVH
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcagctggtgccctgaatttgggcaaactgatgggtgaaaaaatgggtttgccatgt
gaaaaagacacagatgaccgaccaggacatttcaaccatgagggtaaagaagagagtgag
gattcaaagcctaagaaaataaaggcagacacacaactgtctgaacaggcaccttgctcc
caggtttcttcaggtgtggaccaggagaactcatttaatgtagagcaaaccaaaaagaat
gaagaactgaaagcaaagacccctgctaagagaagaaaaaaggagatcattcctcagact
acaccacaacaagatgttccagctcttactgatacttctgaactcgcgtctagcggtcga
cccaagcggagagctgctaaagtcgctttagattatcttcacagccttgccaaggatatt
ggtactccatcagaatcctcaacaccagctaggcccaaatctggagaagccgttgtcact
tcccaaaaaaagaaaccagcaaggtcaaggggagtgaaaaggaaagctccagattctgac
agtgactgtgatggtgatgaggattttgccccagaaaaggatgatgtagaggcagagagc
gatgaagaggattcagaggattcagagccagatgtcagcttgaccatgcctcgccgaggc
aaacaagccagaggaagttatcaatgtttgcttccaaatggcttggctaacaatgtcatg
gaacctgtctggaactctttcagtaggcacaaaaaccgggacgaaaacttctccccatgg
gtgtttccagagtggattccttctgctagagattggcattttctatctaacagtgaggct
gagaaatatttaccccaggagaaggaatctgcttcttttacctttacacgagaaaaaatc
aaccaaccaattcaactgcagacagtgaaaaggtttgagtcattgccacatcatcctgag
cgatgggactctctgttctttgtgggaggtcctgttcgggccatggaatggtgcccgtgt
ccagacggggctgagaaaaaacaatatgctgccatctactgccataaaggcatggacgac
acacaccaaatcaccaagctgtactcgggtcctgccttactgcagctgtgggacctagga
gacctccagtgcaaagaaaggccctcaactactcctcatctagcatatgctctggcgata
gatgacggatacatctggaatatcaagtggtgtcctgctggagcatgggaactgccttct
accagcagaaaggctccacagatgcctagattaggtgttctagctgcaacctttgctaat
ggaacgatcggtgtctacagtcttccgcacccagaagcccttgaaaaacactatcaaagt
aaagatcagcactttatgggctgttttatgctgtttctgcaggtgaagaagcttctgtct
ctgaagatgggctccaatcaagccgaccataaagctcaaagtctggttggtttgtgggat
ctctccagcaagtctacgctgctaagggtcaggtgtcctgatggaggtgtttctctgtac
ccttaccactgttttcatgcccacgatgaaaacatccgaaccttgagctggtgcaaagcc
tcaagtcacttgttggtgaccgtcggggatgaccgcatggctaaaatgtgggatgtcagg
aaaacccacacgcctcttttggcagttaagcgctgcttgtctcctgaagtttactggccc
ctcttatggagtggcttcttgatggctcaagagtgctgctttgcgacgtatggacaacac
ggcattcactactttgattctggttaccttggaattaagcctttttttgtgtgtccaaga
aaagccactatttggagcctttctatgtccgattggataaatgcatttgccattgtggat
aatggaggagactgtttatttagttgtcttcctgaaatggacatggaccccagtaatctc
cgacgacggagattttccgtgtacaggactgacatggtccagtttgaagctggtcagagg
acagcaggtgaggaacaggcggaggaagaaactgaagacaagaccagtattcctggaaga
gagccattgacctacagaggagcagtcaaaaaaaactttctccactttcatgacttggac
atggggaacttttctaagtgtgaaaatcggcccatgatgaagcacctacaacaacacgag
ctcaaaggtgctgctaaagtggaccagatgccactgagtgccctctacaaggttcgtttt
aacccgaacatggatgcgtacaactggttgttgtcaggcggtcagtcaggattggtgcga
gtgaattgtgctcgtggactgagctgctctatcatgatgaaggagcttcgtgaagctcaa
gcccagttcagcgccatgttccagtctcgggagcctgatgactcggtgacagctgtccgt
cacagcacagcggacacagtacaagtgcactag
DBGET
integrated database retrieval system
