Danio rerio (zebrafish): 563448
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Entry
563448 CDS
T01004
Symbol
ddx19a
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03013
Nucleocytoplasmic transport
dre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
563448 (ddx19a)
03015 mRNA surveillance pathway
563448 (ddx19a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
563448 (ddx19a)
Enzymes [BR:
dre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
563448 (ddx19a)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
563448 (ddx19a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
563448
NCBI-ProteinID:
NP_001122187
ZFIN:
ZDB-GENE-080721-12
Ensembl:
ENSDARG00000044325
UniProt:
B3DFU8
LinkDB
All DBs
Position
23:complement(37095432..37113441)
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AA seq
471 aa
AA seq
DB search
MSTDSWALAVDEQESTTKPVGNLRIMEAENASLHQNNGDDEEDEKEDRATQSLLNKLIRS
NLVNNTNQVEVLQRDPNSPLYSVKTFEELRLKPQLLKGVYEMGFNRPSKIQENALPMMLA
EPPQNLIAQSQSGTGKTAAFVLAMLSHVDPACKWSQCLCISPTYELALQTGKVIEQMGKF
YPEVTLAYAVRGHRMERGVRIKDQIVIGTPGTVLDWCIKLKLIDPKKIKVFVLDEADVMI
ATQGHQDQSIRIQRMLPKGCQMLLFSATFEDSVWKFAERVVPDPNIIKLKREEETLDTIK
QYYVLCNSKEDKFNALCNIYGAITIAQAMIFCHTRKMANWLAGQMSKEGHQVALLSGEMV
VEQRAAVIERFRDGKEKVLITTNVCARGIDVEQVSVVINFDLPLDKDSNPDNETYLHRIG
RTGRFGKRGLAINMVDSQRSMEILKTYERHFDKKIARLDTDDLDEIEKIAS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgactcgtgggctttagctgtggacgaacaagagtctacaaccaagcctgtt
gggaacctgcggattatggaagcagaaaatgcatctttgcatcagaataatggtgatgat
gaagaagatgaaaaagaggacagagccacacagagtctcctgaacaagctgatcagaagc
aatctggtcaataacacaaaccaggtggaggttcttcagagagacccaaactcaccgctt
tattcagtcaagactttcgaggagctgagactgaaacctcagttgctcaaaggcgtctat
gaaatgggcttcaacagaccttctaaaatccaagagaatgcccttcccatgatgctggct
gaaccacctcagaatctgattgctcagtctcagtctggcactggtaaaacggctgcattc
gttctggctatgctcagtcatgtggacccagcctgtaaatggtcgcagtgtttgtgcatt
tcccccacatatgagctggctctgcagacgggcaaagtcatcgagcagatgggcaaattt
tatccggaagtcacactggcatatgcagttcgaggacatagaatggagcgtggcgtaagg
atcaaggatcagatcgtcatcggcacacctggaacggttctggactggtgcattaagctg
aaactcatagaccccaaaaagatcaaagtgtttgttctggacgaggccgatgtcatgatc
gccacacagggacaccaggaccagagcattcgcattcagagaatgctgcccaaaggctgc
cagatgctgcttttctctgccacttttgaggactctgtgtggaagtttgccgagcgggtc
gtgcctgatcccaacatcatcaagctaaaacgagaagaggagaccctggacactatcaag
cagtactacgtgctctgcaacagcaaagaagacaagttcaatgcgctctgcaacatctat
ggagccatcactatcgcacaagctatgatcttttgtcatactaggaaaatggccaactgg
cttgctggccagatgtctaaagagggccaccaggtggcgctgctcagtggagaaatggtg
gtcgagcaaagagccgcagttattgaacgcttcagagacggcaaggagaaagtcctcatc
actactaatgtctgtgcaagaggtattgatgttgaacaagtgtcggtggtgatcaacttt
gaccttcccctggacaaagatagcaatccagacaacgagacatacctccaccggattggc
aggactgggcggtttggcaagagaggactcgccatcaacatggtggacagtcagcgcagc
atggagattctcaagacatacgagaggcattttgataagaaaattgcaaggctggacacg
gatgatcttgacgaaatcgaaaaaatcgccagctga
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