Danio rerio (zebrafish): 563454
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Entry
563454 CDS
T01004
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
563454 (vps35l)
Membrane trafficking [BR:
dre04131
]
Protein recycling
Others
Retriever complex
563454 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
563454
NCBI-ProteinID:
NP_001091651
ZFIN:
ZDB-GENE-070521-7
Ensembl:
ENSDARG00000020041
UniProt:
A4VCH4
LinkDB
All DBs
Position
12:11722192..11753156
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AA seq
963 aa
AA seq
DB search
MASVQWHSRSRKYDSEWQASRLEVSAVEFSDYHPLKAITVTDSKSRRGGRKGSTSSSSSS
SSSVAPDPLSSMLDGTDPLSLFAAASETPTLPHSVSAGELGRKRKEKEEEVGLDFEPWSS
KRGEILSRFTTTEKLSINLFMGSDTSKASSPSSAVSEKVRTRLEELDDLEEGSQRELLNL
SQQDYVNRIEELNQSLKEAWGSDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILD
TFGGLVYDRIWSMCADPHPLPESFSADDVNDTAKETCLNWFFKIASIRELVPRLYVEAAL
LKCNRFLTKCGIQETLQRLTAMIRGIGDPLVAVYARAYLCRVGMEVAPHLKDSLNKNFFD
LLASFRQIHGDSVQNQLVLQRVEIPVYLTLYSPAINWILQCVAYRAPEVLLTEMMDRCKK
LGNNALLLNSVMWAFRAEFVATRATDFIGMIKDCDEAGFPKHLLFASLGRSLSCADPPES
ERLSILNEAWKVITKVRSPRDYINCAEIWVEFTCRHFTKREVNTVLADIIKHMTPDRAFE
DAYPQLQSVIKKILTYFHDFSMLFSMEKFLPFLDMFQKDSVRVEVCKSIMEVFIKHQQEP
TRDPVILNALLHICKTMHDSVNALTLDDEKRSLALLINGFIRMVSFGRDFEQQLSFCVEA
RATFCNLEPVIIHLIHTVNQLAMETGRVMKGNHSRKTAAFVRACAAYSFITIPSLTNIFS
RLNLYLLSGQVALANQCLSQADAFLKAAVSILPEVPRSISIEGKQRSSESFLLDFINNFL
STLLVVPDHPEQGVLYLVRGLLNMVQDYTWEDNSDAKVRVYISALPLLAAMSQESYLYTI
PKVDSNETLYGGDPKFIAEINKLCETLIGQVLDHLKSLGRDEEVRRQGSLAFSLFGCLLA
HGDLRNNKLNQLAVNLWNLSHKHGICDTRTSVRTLEHIKHQAQQTDMSHFSDMTARLSLQ
SRA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagttcaatggcactccaggagccgtaaatatgacagtgagtggcaggcgagt
cgtttggaggtttcagcagtggagttcagtgactatcatccactcaaagccatcacggtg
acagactctaaatctcggcgtggaggacgaaaaggcagcacttcctcctcatcttcctcc
tctagttcagtggctcctgatccgctcagctccatgttggatggaacagaccctttgtct
ctctttgctgcagcatccgagactccaactctcccacacagcgtctctgctggggagtta
gggcggaaacgtaaagaaaaagaggaggaggtgggcttagactttgagccatggtcgtct
aaacgtggagagatcctgtctagattcaccaccacggagaaactgtctataaatcttttc
atgggctcagacacaagtaaagcgtccagtcccagctctgctgtctcagagaaggtgcgc
actcgtctggaggaactggatgacctggaggagggctcacagagggagctgttgaatctg
tctcagcaggattatgtgaaccgcattgaagagctcaaccagtctctgaaggaggcgtgg
ggttcagaccagaaagtcaaagccctgaaaatcgtcatccagtgctccaagctgctctct
gatacatcagtaattcagttttaccccagcaagtttgtgcttatcacggacatacttgac
acattcggtggtcttgtgtatgacaggatctggtccatgtgtgctgatcctcatcctcta
ccagagtcattctctgctgatgatgtgaatgacacggccaaagagacctgcctcaactgg
ttctttaaaatcgcctccatcagagagctcgtccctcgactatatgttgaagctgctctt
ctgaaatgcaaccgcttcttgacaaaatgtgggattcaggagactctgcagagactaaca
gctatgatcagaggaataggagacccgctggtagctgtatatgcaagggcctatttatgc
agggtggggatggaggtggcgccgcatctgaaggacagtctcaataaaaatttcttcgat
ctgctggcctcgtttcgtcagattcatggtgacagtgtgcagaatcagctggtgttgcag
cgagtggagattcccgtttatctgactctctattctcctgccataaactggatcctgcag
tgtgtggcctatagagcacctgaggttctgctaactgagatgatggacagatgcaagaag
ttaggcaacaatgctcttctgctaaactctgtcatgtgggcgtttcgggctgaatttgtt
gcaacgagagcaacagacttcattggcatgatcaaagactgtgatgaagctggatttccc
aagcacttgttgtttgcatctctgggccgcagtctgtcctgtgctgaccctccagagagc
gagagactctccatactcaatgaagcctggaaggtcatcactaaagttcgcagcccacgg
gattatatcaactgtgctgagatctgggtcgagttcacttgccgtcacttcacgaaacgg
gaggtgaacactgttcttgctgatatcatcaaacacatgactccagacagagcttttgaa
gatgcatatccacagttgcagtcagtgattaagaagatcctcacctacttccatgatttc
tcaatgcttttttcgatggagaagtttctgccctttttggacatgttccagaaagacagt
gtgagggtggaggtgtgtaaatccatcatggaggtcttcatcaaacaccagcaggaacca
acgagagacccggttattctcaacgcactgctgcacatctgtaagaccatgcacgactct
gtcaatgctttgactttagatgatgaaaaaagatctctggctctgctgatcaatggtttt
attcgtatggtgtcttttgggagggactttgagcagcagttgagtttctgtgtggaagcg
cgagcgactttctgtaatctagagcctgtcatcatccacctcatacatacggtgaatcag
ttagccatggagacgggtcgtgtgatgaaaggcaatcactcacgtaaaacagctgctttt
gtcagggcatgtgccgcctacagcttcatcaccattccatccctcacgaacatcttcagc
cgcctcaacctctatctgctgtctggacaagtagcgctggccaaccagtgtctgtcccag
gcggacgcatttctaaaggcagcagtcagtattttgccagaagtcccgcgcagcatcagc
attgagggtaaacagcgatcctcagaatcctttctgctagacttcatcaacaacttcctc
tccacactgctcgtagtgccggatcatccggagcagggtgtgctgtatctggtgcgagga
cttttaaatatggttcaggattacacctgggaagacaacagtgatgccaaagtccgtgtc
tacatcagcgctttaccattactagcagcaatgagccaagagagctacctctacaccatt
cctaaagtggattcaaatgaaactctgtatggaggagatcccaagttcatcgcagagatc
aacaagctgtgtgagactctgatcgggcaggttctggatcatttaaagagtctgggtcga
gacgaggaagtgcgcaggcagggcagtctggctttctctttgtttggctgtctattggct
catggggatctgcggaacaacaaactcaaccagctggctgtcaacctgtggaacctcagc
cacaaacacggcatctgtgacacgcgtacatccgtccggactctggaacacatcaaacat
caggcgcagcagactgacatgagccatttctctgacatgacagcgcgtctgtcactgcag
tcccgagcctga
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