Danio rerio (zebrafish): 563598
Help
Entry
563598 CDS
T01004
Symbol
nrxn3a
Name
(RefSeq) neurexin 3a precursor
KO
K07377
neurexin
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
563598 (nrxn3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
563598 (nrxn3a)
Membrane trafficking [BR:
dre04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
563598 (nrxn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
563598
NCBI-ProteinID:
NP_001417779
ZFIN:
ZDB-GENE-070206-9
Ensembl:
ENSDARG00000043746
UniProt:
A0AB13AAE4
LinkDB
All DBs
Position
17:complement(18168827..18715777)
Genome browser
AA seq
1690 aa
AA seq
DB search
MNFFRFPVQLQLLISTVLGPCLGLEFTGLQGQWARYLRWDASTRSDLSFQFKTDVSTALI
LYFDDGGFCDFLQLMVVEGKLQLQFSIDCAETTVVSDKRVNDSSWHSATLSRYNLRTVLG
LDGVSKWAEVRPLRQYMKIVSDLFLGGVPQDIRISVLTLPTVKDLPPFKGIIRELKYNSK
EPILLSSQRVRMDIEGICMENPCENGGTCSVVDGEPLCDCSKTEYVGRFCNEEANNIPGF
AHMMMADQAKGKAREENVATFRGSEFFCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTG
KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNSWHDVKVTRNLRQHSGIGHA
MVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKN
NDIRLELSRLARIVDPKMKIQGDVVFKCENVATLDPISFETPEAYISLPKWNTKRMGSIS
FDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGSLYLLLDMGSGTIKVKA
TQNKVNDGAWYHVDIQRDGRSGTISVNSRRTPFTASGENEILDLEGDMYLGGLPDSRGSL
ILPTELWTAMLNYGYVGCIRDLFIDGRSKDIRQIAEAQNGAGIKPSCNKMSGKQCDSYPC
KNKGLCKEGWNRFICDCTGTGYWSRTCEREASILSYDGSMYMKVVMPTVMHTEAEDVSLR
FMSQRAYGLLMATTSRDSADTLRLELDGSRVKLTVNLDCIRINCNSSKGPETLYAGQKLN
DNEWHTVRVIRRGKSYKLTVDDDVAEGQMVGDHTRLEFHNIETGVMTERRFVSMIPSSFI
GHLQSLKFNGLLYIDLCKNGDIDFCELNARFGMRSIIADPVTFKSKNSYLSLATLQAYTS
MHLFFQFKTTSADGFILFNSGDGSDFIAVELVKGYIHYVFNLGNGPNVIKGNSERALHDN
QWHNVVITRDNSNVHTLKVDAKAVSQVVNGAKNLDLKGDLFIAGLGPNMYNNLPKLVASR
EGFKGCLASVDLNGRLPDLINDALFRSGQIERGCEVGFTKADLKGPSTTCQEDSCANMGI
CIQQWENYTCDCSMTSYTGTHCNDPGTTYIFGKGGGLISFNWPANERPSTRTDRLTVGFS
TSLKDGILIRIDSAPGLGDYLMLHIEQGKIGVTFNIGTADITVQESSTAVNDGKYHVVRF
TRNGGNATLQVDNWAINEHFPSGNSDNERIQMANKKIPFKYARPVEEWLQEKGRQLTIFN
TQATITIGGSDRKRPFQGQLSGLYYNGLKVLNMAAQGNPNIKINGSVRLVGEVPAAGSAR
TTALPPEMSTTFIETTTTMSTTTTRKHRTPPTIQTTDDMVSSAECSSDDEDFAECEGHAG
GLGGELVFPVIVKDPLELPSVATRTPSIPFPPTLTIIETTKESLSMATEAGVPCLSDGGS
DDCGDDDDDDDDDGLMISGYGSGEAYDSNLPPTDDEDFYTTFSLVTDKTLSSSTFEGGYK
AHAPKWGSKDFRPNKVFDSGRTTTASFSPKLSRSTTTSTPPKLPAGKMNHRELKPQPDIV
LLPLPTSYEVDNTKLKSPLITSPMFRNVPTAIPTEPGIRRVPGASEVVRESSSTTGMVVG
IVAAAALCILILLYAMYKYRNRDEGSYQVDETRNYITNSAQSNGAVMKDKQQSTKSGNKK
QKNKDKEYYV
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcttcagatttccagtccagttgcagctgctgatcagtactgtgcttgggccc
tgcttgggcctggagtttacagggttgcaaggccagtgggcacgctatctccgctgggac
gccagcaccagaagtgacctcagcttccagttcaaaacagacgtgtccactgccttaatc
ctgtactttgacgatggcggcttctgcgacttcctgcaactcatggtggttgaggggaag
ctccaattgcagtttagcattgactgcgccgagaccactgttgtatcggacaagcgagtc
aatgacagcagctggcattctgccaccctgagcaggtacaacctgagaactgtgctgggt
ctggatggagtgagcaaatgggccgaagtgcggccactgaggcagtacatgaagatcgtt
agtgacctcttcctgggcggagtccctcaagatattcgcatttctgtgctcactctcccg
acagtgaaggatcttccgccgtttaagggaattatcagggaactgaagtacaatagcaag
gaacctattctacttagcagccagagggtccgcatggacatcgaggggatctgcatggag
aacccatgcgaaaacggagggacgtgctctgttgtagatggggaaccactttgtgattgt
tctaagacggaatatgttggccgattctgcaacgaagaggccaacaacatcccaggtttt
gcacacatgatgatggcggatcaagccaagggcaaagcacgagaagagaatgtggccact
ttccgaggctcggagttcttctgctacgacttatctcagaatcccatccagagcagcagt
gatgagatcacgttgtccttcaagacctggcaaagaaatgggcttatcctccacacgggc
aaatcagcggactacgtcaacctggccttgaaagatggggctgtttcattggtcatcaac
ttgggttccggagccttcgaggccattgtcgaacctgtcaatggcaaattcaatgacaac
tcttggcatgatgtgaaggtcacgcgcaacctcagacagcattcaggtattggacacgct
atggtgacgatatctgtggatggcatcctgaccacgacaggctacacgcaggaagactat
acaatgctgggatcagatgactttttctatgtcggtggatctccgagtacagcagactta
cctgggtcgcccgtcagcaacaactttatgggttgcctgaaagaggttgtttacaaaaac
aatgacatccggctggagctgtcccggctcgcccgcattgtggaccccaagatgaagatc
cagggcgatgtggtgttcaagtgtgaaaacgtggcaacgctggatccgatttcgttcgag
acgcctgaggcctacatcagcctgcctaagtggaacaccaaacgcatgggctccatctct
tttgacttccgcaccaccgaacccaacggccttattctcttcacccacggcaagccacag
gagagaaaggacgcccgcagccagaagaacacaaaagtggacttctttgccgtggagctg
ctggatggaagtctgtacttgctgctggatatgggctctgggacaatcaaagtgaaagcc
acacagaacaaggtgaacgacggggcctggtaccatgtggacatccagagagatggaaga
tcaggcaccatatcagtaaacagccgccgcactcctttcactgccagtggggaaaatgag
attctggacctggagggtgacatgtacttaggcggccttcctgacagccggggtagtctc
atcctgcccaccgaactgtggaccgccatgttgaactacggctatgtgggctgcattcgg
gacctgttcattgatggtcgcagtaaagacatccggcagatcgctgaggcccagaacgga
gcaggcatcaaaccatcctgcaacaagatgtcaggcaaacagtgcgacagttacccatgc
aaaaacaaaggcttgtgcaaagaaggctggaatcggtttatctgtgactgcacaggcact
ggttactggtcccgcacctgcgagagggaggcgtccatcttgagctacgatggcagcatg
tatatgaaagtggtgatgccgaccgttatgcacactgaagcggaggacgtttctctgcgc
ttcatgtctcagcgggcatacggcctgctcatggccaccacgtcacgcgactccgccgat
acgcttcggctagagctggacggcagtcgcgtcaaactcacggtcaacttagactgtatc
aggataaactgtaactccagcaaaggaccagagacactgtatgccggacaaaaactcaat
gataatgaatggcatactgtgcgcgtgatccggaggggcaaaagctacaagctaacggtt
gacgatgacgtagcagaaggtcagatggtgggcgatcacacccggttagagttccacaac
atcgagactggtgtgatgactgagcgccgcttcgtctccatgatcccctccagcttcatc
ggtcacctgcagagcctgaagttcaacggcctgctgtacatcgacctgtgcaagaacggt
gacatcgacttctgcgaactcaacgctcgctttggcatgcgctccatcatcgcagaccct
gtgacgttcaagtcaaagaacagttacttgagtcttgccaccttgcaggcttatacctcc
atgcaccttttcttccagttcaagacgacctctgcggatggattcatcctcttcaacagc
ggggacggaagtgatttcatcgctgtggagctggtgaaagggtatatacattatgtgttt
aatctcggcaacgggcccaatgtaatcaaaggcaacagtgaacgagctctccatgacaac
cagtggcataatgttgtcatcacaagagacaacagtaacgtccacacactcaaagtcgat
gccaaggcagtgagtcaggtcgtcaatggcgctaaaaatctggaccttaaaggtgacctc
ttcattgccggattggggcccaacatgtacaacaaccttccgaagctcgtggcctccaga
gagggctttaaaggctgcctggcatccgtagacctgaacggacgccttcctgacctcata
aacgacgccctgttccgcagcggccagatcgagcgaggatgcgaagttggtttcaccaaa
gcagatctaaaaggtcctagcactacatgccaagaggactcctgcgccaacatggggatc
tgcatccagcaatgggagaactacacctgcgactgttcaatgacttcctacaccgggaca
cactgtaatgaccctggaacaacatatatcttcgggaaaggaggaggcctgatatccttt
aactggcccgccaatgagcgtccgagcacccgtacggacaggctgacagtgggcttcagc
acgtccctcaaggatggcatcctgatccgcatcgacagcgcccccgggctgggagactac
ctcatgctccacatcgagcaaggcaaaattggagtcacattcaacattgggacggctgat
atcactgttcaggagagcagcaccgcggtaaatgacggcaagtaccatgtagttcgcttc
accagaaatgggggcaatgctacacttcaggtggacaactgggccatcaatgagcacttc
ccctcaggtaacagcgataatgagagaattcaaatggccaataagaaaattcctttcaaa
tatgcccggcccgtagaggaatggcttcaggagaaagggcggcagctaacgatattcaac
acccaggccacgataacaattggtggttcagaccgcaagaggccatttcagggccagctc
tccggactctactacaatggcctcaaagtgctcaacatggctgctcagggcaaccctaac
atcaaaatcaatggcagcgtccgactggtgggagaggttcctgccgctggttcagccaga
actacggctctccctccagagatgtccaccacctttatcgagaccaccaccaccatgtct
accaccaccaccagaaaacaccgcaccccaccaacaatacagaccacggatgacatggtt
tcgtcggccgagtgttccagtgacgacgaggactttgcggagtgcgaaggacatgcaggt
gggctaggaggcgaattagttttcccagtaattgtaaaggatcccttagagctcccctct
gtagccactcgtacaccctccatcccctttcccccaaccctcaccattattgagaccacc
aaagagtccctgtccatggccactgaggcgggggtaccttgcttgtcggacggaggcagc
gatgattgtggtgatgatgatgatgatgatgatgatgatggcttgatgatatctgggtat
ggctctggggaagcatacgactctaacctgccccctactgatgatgaagatttttacacc
accttctccttggtaacagataagaccttgtcttcgtcgacctttgaaggtggctacaaa
gctcacgcgcctaagtggggatccaaggactttagacctaacaaagtcttcgattccggt
aggactactaccgcctctttttcccccaagctgagccgctccacaaccacgtccacgcca
cccaaactgcccgcgggcaaaatgaatcacagagagctaaagccccagcccgacatagtc
ttgcttccattgcccacttcctatgaggtagacaacacaaagctgaagagcccattaata
acctcccccatgttccgtaatgtacccacagcaatccccacggagccgggcatcaggcgg
gttccgggggcctccgaggtggtccgtgaatctagcagcaccaccggaatggtcgtcggg
atagttgccgctgccgctttgtgcatcctaattctgctctacgccatgtataagtacaga
aacagggacgaggggtcctaccaagtggatgagaccaggaattacattaccaactcggcg
cagagcaatggcgcggtcatgaaggacaagcagcagagcaccaaaagcggcaacaagaaa
cagaaaaacaaggacaaggagtactacgtgtga
DBGET
integrated database retrieval system
