Danio rerio (zebrafish): 563643
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Entry
563643 CDS
T01004
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
563643 (mms19)
03400 DNA repair and recombination proteins [BR:
dre03400
]
563643 (mms19)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
563643 (mms19)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
563643 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_ECM29
PDS5
Motif
Other DBs
NCBI-GeneID:
563643
NCBI-ProteinID:
NP_001334591
ZFIN:
ZDB-GENE-120316-2
Ensembl:
ENSDARG00000079067
UniProt:
A0A8M2B1Z5
LinkDB
All DBs
Position
12:2804523..2850332
Genome browser
AA seq
1016 aa
AA seq
DB search
MAADNNVLLGLVEEFVSGQVDSKAADTSTGVKNGQFTVLQLVEALGVSLTSSQPQTRGRG
VQLLSQVLQECYSGLSEREVEVLIAFYENRLKDHYVITPHVLRGLKALAKCSVLPPGSAV
SILKSIFQDVHVQSLMVTERSCVYNILISLMESREEELKGLGADFIFGFVQSVDGERDPR
NLLLAFQVAKNIIYRGYDLGKFVEELFEVTSCYFPIDFSPPPNDPHGITQEELILSLRAV
LTGTPRFAEFLLPLIIEKMDSDVQSAKVDSMHTLAACGQTYSHKELAEFLPGLWSSIRRE
VFQTASERVESAGLSALSSLVSCLSRSVLNSDSEDSLQVFLNLVLKDCQHHLCEPDLKLV
WPSAKLLQAAAGASYRASLIGTQAVIPALLDQYNNRTQCAQRRTLLEVLQGFVQPTPLSR
PADGEESVLVAFQQSLCTVVFSALSETSAGLQVTATRVLTALSQQPGLLSQTDVENAVDH
LTRLILEEEEAQVSLAVVECSGSLAHLHPHAFVSRMIPQLKEKILSDECSGAVRRRCVAA
LASVSSQPSVVQESSPVLLQVLTSAHTGCCGFSVEEVIAVCISLQRIAVHARDNEAIGQF
FHDIIIPRLLGLTLQAALQSKDSGHISPLTDEAVLSAIVPVISTACAALKPESASRMAAQ
AVSLFLDGDTSFLPENAFPSQIQPLQSQADSRGPSQLVCLLMACVCSLPRSVEIPDMDRL
LVQLEDLSCTSPHLFSYTFASKCIAGLVNKRPAGAALNAVLDRVLKRVSLELEETSSTHR
TQAFTLLIWVAKALLLRYHPLSTALTDKLFSLLSDSALGSLVADGFCVLMNDSPDVLNRD
CHADVRIMYRQRFFTENSSKLVQGFNSAEQAKKSCYLKALSHIVNNLPREVQLTELPALL
PLLLEALSCVDQGVQLSTLSCLQPVLLESPAALNTQLEALFTRLLALTTSPAMKVRMASL
RCVHALSRLPEHMVMPFRARVLKALAAPLDDKKRLVRKEAVAARGEWFLLGSPGGR
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggataacaatgtgctgctgggtttagtggaagaattcgtgtccggacaggtt
gatagcaaggctgcagacacgtcgacaggtgtcaagaacgggcagttcacagttctccaa
ctggttgaagcattgggggtgagtttgaccagctctcagcctcagactcgtggcagagga
gttcagctgctttctcaggttttgcaggaatgctacagcggcctgtcagagcgcgaggtg
gaggtcctgatagcgttctatgaaaacagactgaaggatcactatgttatcactccacat
gttcttcgagggctcaaagctttggctaaatgctccgttctgcctcccggttcagcggtg
tccattttgaaatccatcttccaggatgttcacgttcagtccctgatggtgacggagaga
tcatgtgtttacaacattcttatcagtctgatggagtccagagaggaagagctcaaaggt
ttgggcgcagacttcatctttggattcgtacagtcagtggatggagaacgagatccacgc
aacctcctgctggccttccaggtggccaagaacatcatttaccggggttatgatctcggt
aaatttgtagaggagctctttgaagtgacgtcctgttatttccccatagacttcagccct
ccacccaacgatcctcatggaatcacacaggaagagcttattctttctctacgggctgtt
ctgaccgggacgcctcggtttgcggagtttctgttaccattgatcatcgagaagatggac
tcggatgttcagagcgctaaagtggactccatgcacacactggctgcctgcggtcagaca
tacagccataaagagctggctgaattccttccaggcctttggagctcaatacggagagag
gttttccagacggccagtgagagggtggaatcggctggtctttcggctctgagctcacta
gtgtcctgtctatcccgttctgtgcttaattctgactcggaggattcactgcaagtcttt
ctgaaccttgtccttaaagactgccagcatcatctctgtgagccggacctgaagctggtg
tggccgagcgctaaactcttgcaggccgcagccggagcctcatatagagccagtctaatc
gggacgcaggccgtcattcctgccttgctggaccaatacaataacaggacacagtgtgct
cagcggcgcacccttctggaggttctgcagggtttcgttcagcccactccgctcagccgg
cctgcagatggagaggagagtgtgttggttgcgtttcagcagtcgttatgcactgtggtg
ttttctgcattaagcgagacgagcgctggtctgcaggtcacagccacacgagtgctcact
gcactatcacagcagccaggcttgctgtctcagaccgatgtcgaaaacgctgttgatcat
ttgaccagactcattttagaagaagaggaggctcaagtcagtttggcagtggtggagtgt
tcaggctctctggctcatctgcatccccatgccttcgtctccaggatgattcctcagctg
aaggaaaagatcctgtcagatgagtgtagtggtgcagtacgtcggcggtgtgttgcagct
ttagcgtcagtatcctctcagcccagcgtggtgcaggagagctctccggttcttctccag
gtgctgacatcagcccacacaggctgctgcggtttctctgtggaggaagtgatcgccgtg
tgcatcagtttgcagaggatagcagtgcatgctcgcgataatgaggcgattggccaattc
ttccatgacatcatcatcccgcgactcctagggctgactttacaggcggcgctgcagagt
aaagactccggtcacatcagtccactcacagatgaagccgttctgtctgctatcgtccct
gtgatcagcacagcctgtgccgctctaaaaccagaatcggcttctcgtatggcggcccag
gcagtttctttgtttctggatggagacacatcctttctgccagaaaatgccttcccttca
caaatccagccacttcagagtcaggcagactcccgggggccgtctcagctggtgtgttta
ctgatggcctgcgtttgctctcttccacgcagtgtggagattcctgacatggaccggctt
ctggtgcagctggaggatctgagctgtacatctccacatctgttttcttacacttttgca
tcaaaatgcatcgctggtctggtcaacaagaggccggcaggagcggctctgaacgcagtg
ctggaccgagtgttaaagagggtcagtctggagctggaggaaacgtcatccacgcacaga
acacaggccttcacactgctgatctgggtggccaaagctctgctcttacggtaccatccg
ctgtcaacagccctgaccgacaagctcttctctctgttgagtgactctgcgttgggatct
ctggtggctgatggtttctgtgtcctcatgaacgactcgccggatgtgctcaatcgagat
tgtcatgctgacgttcgcatcatgtacagacagcgctttttcactgagaactcaagcaag
ctggttcaaggtttcaactcggcagagcaagcaaagaagtcttgctatttgaaagcgctg
tcacacatcgtcaataacctacctagagaagtgcaattgacggagcttcctgcgttgctg
ccgctgctattggaggctctgtcgtgtgtggatcagggtgttcagttgtccacactctcc
tgtcttcagccagtgttgctggagtctcctgcagctctcaatactcagctggaggccctg
ttcactcgtctgctcgccctcaccaccagccctgccatgaaagtgagaatggcgtcgctc
cgctgtgtccatgctctgtctcgtctgcctgaacatatggtcatgccgttccgtgcccga
gtcctgaaggctctcgctgctcctctggatgataagaagaggctggtgaggaaggaggcc
gtagcggctcgaggagaatggtttttgttaggaagtcctggtggaagatga
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integrated database retrieval system
