KEGG   Danio rerio (zebrafish): 563669
Entry
563669            CDS       T01004                                 
Symbol
stag1b
Name
(RefSeq) cohesin subunit SA-1
  KO
K06671  cohesin complex subunit SA-1/2
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    563669 (stag1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    563669 (stag1b)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    563669 (stag1b)
SSDB
Motif
Pfam: HEAT_SCC3-SA STAG SCD Cnd3
Other DBs
NCBI-GeneID: 563669
NCBI-ProteinID: XP_692120
ZFIN: ZDB-GENE-030131-1393
Ensembl: ENSDARG00000062137
UniProt: E7FC33
LinkDB
Position
24:complement(26948712..26995161)
AA seq 1256 aa
MINSDFPVLQDSSNDGQGDTISLAMSVSELDDPEVGKGKKKRGRPGKQGAANKKARRSPV
DKGGRRPNGVAHQNGEGTDPSTLFEVVKQGKSAMQSVIDDWIESYKQDRDLALLDLINFF
IHCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMTGPQWKKFRYNFCEFIMV
LIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINQ
DNTQRQYEAERNKVAGKRANEKLELLLEKRKELQENQDEIENMMNSIFKGIFVHRYRDAI
AEIRAICIEEIGVWMKLYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQTLYTNRELY
PKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEDALSNEDCENVYHLVYSAH
RPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRNSPNGNLIKMLVLFFLESELHEHAAYL
VDSLWDSSHDLLKDWDCMVELLLEDPVQGEEVLGDRHESALIELMVCTIRQAAEAHPPVG
RGTGKRVLTAKEKKTQIDDKNRLTEHLIVALPMLLSKYQVDAEKVANLLQIPQYFDLEVY
SSGRMEKHLDALLKQIRVVVEKHAEMEVLEACSKTYSILCSEEYTIMNRVDIARSQLIDE
LTDKFAHSVEDLLQEGEEADDDDIYNVLSTLKKLTAFHNAHDLTKWDLFKNCYRLLKMGI
EQGSMPEQIAVQALQCSHYSILWQLVKITEGCPSKDDLLALRRVVKSFLAVCQQCLSNVN
TPVKEQAFMLLCDLLMIFSHQLVSGGREGLQPLVFNPDGSLQNELLNFVLDHVFIDQDDE
NQSMEGDEEDEANKIEALHKRRNLLAAFCKLIIYDIVDMPAAADIFKQYMKYYNDYGDII
KETLSKTRQMDKIQCAKTLILSLQQLFNELIQDQGPNLDRTSSHVSGIKELARRFALTFG
LDQIKTREAVATLHKDGIEFAFKVPNPKGPEYPPPNLAFLEVLCEFSSKLLRQDKKTVHS
YLEKFMTEYMMERREDVWLPLIAYRNSLLTGGDDDRLSVTTGASSTSKASTVRSKRGRPP
QHKRRPDEESVEGSWVMRNDTLQTPGGLHTPQLTSTVLRENPRQAADHIPDQDSSEPGSE
PDYMHNPQMQMSWLDQQKMEEVNRKERSGMNYMKSRSAGVRQQVRGLMEDDAEPIFEDVM
MSSRGQLEDMNEEFEDTMVIDLPASRNRRERAELRPDFFDSTAIMEDDPGFGMQMF
NT seq 3771 nt   +upstreamnt  +downstreamnt
atgatcaactctgactttcctgttttacaggattcgtcaaatgacggtcaaggtgacacc
atcagtctggccatgagcgtcagtgagctggatgatcctgaggttggaaaaggcaagaaa
aagagaggcaggcctggaaaacaaggagcggctaataagaaggccagaaggtctccggtt
gataaaggcgggaggaggccgaatggagtggcccatcagaatggagagggcacagaccct
agcactctgtttgaggtggtcaaacaaggcaaaagtgccatgcagtcggtcattgatgat
tggattgaatcctacaagcaagatcgagacctggctctgttggatctgatcaacttcttc
attcattgttctggctgcaaaggcactgtacggatcgagatgttcaggaacatgcagaat
gctgaaataatcaggaaaatgacagaagagtttgatgaggacagcggtgattaccctctc
acgatgacaggacctcagtggaagaagttccgctataacttttgcgagttcatcatggtt
ctgatccgtcagtgtcaatacagcatcatctacgatgagtacatgatggacacggtcatt
tctctgctcactggactttcagactctcaggtccgagccttcagacacaccagcacactg
gcagcaatgaaactgatgacagcgctggtaaatgttgctctgaacctgagcatcaatcag
gataacacgcagaggcagtatgaggctgaaagaaacaaggttgcagggaaaagagccaac
gagaagctggaacttctgctggagaagaggaaagagcttcaagaaaaccaagatgagatt
gagaacatgatgaactccatcttcaagggtatttttgttcaccgttacagggatgccatt
gcagaaatccgagctatttgtatagaggagattggtgtttggatgaagttgtacagtgat
gcttttcttaatgacagttatctaaagtacgtgggttggacactacatgacagacaaggt
gaagttcgactcaagtgtctaaaagcccttcagactctctacaccaacagagaactttac
cccaaacttgagctcttcaccaatcgatttaaggaccgtattgtgtccatgacgctggat
aaagagtatgatgtggctgttgaagccataagactagtcactttgattttgcatggtagt
gaagatgctctgtctaatgaagactgtgagaacgtctatcatctagtatattcagctcat
cgccctgttgctgtggcagctggagagtttcttcacaggaagctgttcagcagacatgac
cctcaggctgaggaggctttggcaaagagacgaggtcgaaacagcccgaatgggaacctt
ataaaaatgctggtgcttttcttcctggaaagtgagcttcacgagcatgcagcgtacctg
gtggacagtctgtgggacagttcacatgatctgctcaaagactgggattgcatggtagag
ctcctgctggaggatcctgtgcagggggaagaggtgttgggagatcggcatgagagcgct
ttgattgagctcatggtttgcacgatccgacaggcagcagaagctcatccgcctgtgggc
agaggaacaggaaagagggtgctcacggccaaagagaagaagacccagattgacgataag
aacagattgactgaacacttgattgttgctcttcctatgctgctttcaaagtaccaggtt
gatgcagaaaaggtggcgaatctccttcaaatccctcaatatttcgatcttgaggtctac
agttcaggaagaatggaaaagcatctggacgccctgctgaagcagatccgggtggtggtg
gagaaacacgctgagatggaggttctggaggcctgcagcaagacttacagcatcttgtgc
agtgaagaatacaccatcatgaaccgcgtagacatcgctcgcagtcaactcatcgacgag
cttacggacaaatttgctcactctgttgaagacctgctgcaggagggtgaagaagcagat
gatgacgacatttataatgttctttcgacgctaaagaagctcactgctttccataatgca
catgaccttacaaagtgggaccttttcaaaaactgctatcgattgttgaagatgggaatc
gagcagggctccatgccagagcagatcgctgtccaggctcttcagtgctctcattactcc
atcctgtggcagctggtgaaaatcactgaaggatgtccatcaaaggatgatcttctggca
ttaagaagagtggttaagtcttttctagcagtttgccaacagtgcctgtctaatgtgaac
actccagtcaaagagcaggcgttcatgttgctgtgtgacctcctgatgatcttcagtcat
caattggtctcaggcggtcgagaaggtttgcagccgctggtttttaatcctgatggctct
ttgcagaatgaactgctcaactttgtcctggatcacgtttttatcgaccaggatgatgag
aatcagagcatggagggtgatgaagaggatgaagccaataagatcgaggctcttcataag
agaagaaatctgttggctgctttctgcaaactcattatctacgacattgtggacatgccc
gctgctgctgacatctttaaacaatacatgaagtattacaacgactacggagacatcatc
aaagaaaccttgagcaagaccagacagatggacaagatccagtgcgcaaagacactcatc
cttagcttgcagcagctctttaatgagctgatccaggaccaaggacccaatctggaccga
acgtcctcccacgtcagcggcattaaggaactggctcgtcgcttcgctctgacatttggg
ttggatcagattaaaaccagagaggccgtcgccacactgcacaaggatgggattgaattc
gccttcaaggtcccaaatccaaaaggaccagagtacccaccaccaaacctggctttcctg
gaggttctctgcgagttctcctccaaactcctcagacaggacaagaagactgttcactct
tacctggagaagttcatgacggagtatatgatggaaagaagagaagacgtgtggctgcct
ctgatcgcgtacaggaactctctattgacaggaggagatgatgatcgtctgtctgtcaca
accggagcctcctccactagcaaagccagcacagtccgcagtaaaagaggccgaccgcca
cagcacaaaagaagaccagacgaggagagtgttgagggatcgtgggtaatgcgtaatgac
acactgcagacaccaggaggcctccacacccctcagctcacgtctaccgtcctgagagaa
aaccccagacaggccgcagatcacatccccgaccaggactcttcagaaccgggatcagaa
ccagactacatgcacaacccacagatgcagatgtcatggttggatcagcagaagatggag
gaagtgaaccgaaaagaaagaagcgggatgaactacatgaaatcacgcagcgctggagtg
agacagcaggtgcgaggcctaatggaggatgatgctgagcccatctttgaggacgtgatg
atgtcatcgcgcggtcaactagaggacatgaacgaggagtttgaggatactatggtcata
gatctgccggcgtcgagaaaccgaagagaaagagccgaactcagaccagacttttttgac
tctacagccataatggaagacgatcctggattcggaatgcagatgttttag

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