Danio rerio (zebrafish): 563679
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Entry
563679 CDS
T01004
Symbol
zgc:136908
Name
(RefSeq) Transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04137
Mitophagy - animal
dre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
563679 (zgc:136908)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
563679 (zgc:136908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
563679 (zgc:136908)
03009 Ribosome biogenesis [BR:
dre03009
]
563679 (zgc:136908)
04131 Membrane trafficking [BR:
dre04131
]
563679 (zgc:136908)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dre04147
]
563679 (zgc:136908)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
563679 (zgc:136908)
Ribosome biogenesis [BR:
dre03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
563679 (zgc:136908)
Membrane trafficking [BR:
dre04131
]
SNARE
SNARE associated proteins
Others
563679 (zgc:136908)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
563679 (zgc:136908)
Exosome [BR:
dre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
563679 (zgc:136908)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_22
AAA_2
TIP49
Vps4_C
AAA_28
RNA_helicase
AAA_14
NPHP3_N
nSTAND3
Mg_chelatase
Parvo_NS1
AAA_17
AAA_18
ATPase_2
ATPase
IstB_IS21
AAA_7
DUF815
ABC_tran
AAA_24
Viral_helicase1
ResIII
Sigma54_activat
TsaE
NACHT
NB-ARC
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
563679
NCBI-ProteinID:
NP_001035017
ZFIN:
ZDB-GENE-060312-22
Ensembl:
ENSDARG00000011983
UniProt:
Q29RA2
LinkDB
All DBs
Position
1:complement(59275659..59299776)
Genome browser
AA seq
805 aa
AA seq
DB search
MPASGASDPKTEDFSTAILKQKIRPNRLIVDEATNEDNSIVCLSQVKMEELQLFRGDTVV
LRGRKRRQTVCIVLTDDTCGNERVRMNRVTRNNLRVRLGDVISIHPCPDVKYGKRIHVLP
IDDTIEGLTGNLFDVFLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVETDPTPHCIVAP
DTIIHCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPP
RGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEA
ALQAIRKKMTLIDLEDDSIDADLLNSLAVTMDDFKWALSQSNPSALRETVVEVPHVNWED
IGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDAGGAAD
RVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPSRTAILR
ANLRKSPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIREAIEAEIRAERQRQARKE
TAMDDDYDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPTAPK
SGGGQGSSQGSGGHFRDEGDDDLYQ
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcctctggagcctcagatccaaagacggaggatttctccactgctattttgaaa
cagaagattcgaccgaatcggctcattgtggatgaagccaccaatgaggacaacagtatc
gtgtgcttgtcgcaggttaaaatggaggagctgcagttgtttcgtggagacactgtggtt
ttgcgcggtcggaaacggagacagacggtctgcatcgttctcacagacgacacatgtggc
aatgagcgcgtgcgcatgaacagggtcacacgcaacaacctgcgtgtgcggctcggtgat
gtcatcagtatccatccttgtccagatgtgaaatatgggaagcgcatccacgttctgccc
attgatgacactatcgaagggctgacgggaaacctgtttgacgtatttctgaagccgtat
ttcctggaggcttacagaccggttcacaaaggtgatattttcctggtcagaggaggcatg
agagcggtggagtttaaagtggtagaaacagatcccaccccacactgcatcgttgccccg
gacaccataatccactgtgagggagaaccaatcaaacgagaggatgaggaggagagtctg
aatgacatcggctatgatgacatcggaggctgtcggaaacagctggctcagattaaagag
atggtggagctgccgctgagacacccggccctgttcaaagccatcggagtgaagcctccg
agagggattctcctgtatggtccgcctggaacagggaagacgctggtggctcgtgctgtg
gccaatgagactggagctttcttctttctcatcaacggtcctgaaatcatgagtaagctg
gcaggagagtctgagagcaacctgagaaaagctttcgaggaggctgaaaaaaacgcccct
gctatcatcttcatcgatgagctggatgctatcgctccgaaacgtgagaagactcacggt
gaggttgagcggaggatcgtctctcagttgctcacgctgatggacggcctgaaacagcgc
gctcatgttgtcgtaatggcagctacaaacaggcccaacagtgtggatgctgctcttcgg
cgatttggacgttttgatcgagagattgacatcggcatccctgactccactggcaggctg
gaaattttacagattcacaccaagaacatgaagctgtcagaagatgtggatctggaacag
atctctgctgagacacatggacatgtaggagcagatctggccgctctgtgttcagaagca
gcactgcaggccatccgcaaaaagatgaccttaattgatctggaggacgacagcatcgat
gcagatctcctcaactcactggccgtcacaatggacgacttcaagtgggctctaagtcag
agtaacccatctgctctgagggagacggtcgtggaggttcctcatgtgaactgggaggac
attggaggactcgatgaggtcaagcgggagttacaggagcttgtgcagtatcccgtagag
tatcctgataaatttctgaagtttggaatgactccgtctcgaggggttttgttttatggt
ccaccaggctgcggaaaaaccctgctagctaaagccattgccaatgaatgccaggccaac
tttgtgtccatcaaaggcccggagctgctcactatgtggtttggtgaatcagaggcaaac
gtcagagatgtgtttgataaggcacgacaggcggctccatgtattctgtttttcgatgag
ctggactctattgctaaagcacgaggaggcggagctggagatgcaggaggcgcggctgac
agggtcatcaaccagatcttgacagaaatggatgggatgaccaacaagaagaacgtcttt
atcattggtgccactaacaggcctgatatcattgatcctgccattctaaggcctggtcgt
ttggatcagcttatttatatccctctgcctgacatgccctcccgcactgccatcctgcgc
gccaaccttcgcaagtccccagtcgctaaggatgtagatctgatgtatctgtccaagatt
acagaaggtttctcgggagcagacctgactgagatctgtcagagggcctgtaaactcgcc
atcagagaagccatagaggcagagatccgtgctgagagacagcggcaggccaggaaagag
actgctatggatgatgattacgacccagtgcctgagatcaggaaggatcatttcgaggaa
gccatgagatttgctcgtcggtctgtcagtgataatgacataaggaagtatgagatgttt
gctcagactcttcaacagagccgtggatttgggaacttcaggtttcctactgcgcccaag
tcaggaggaggtcaagggtcgagccaaggctctggaggtcatttcagagatgaaggagac
gatgatctctatcagtaa
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