KEGG   Danio rerio (zebrafish): 563879
Entry
563879            CDS       T01004                                 
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    563879 (rnf115b)
   04121 Ubiquitin system [BR:dre04121]
    563879 (rnf115b)
Enzymes [BR:dre01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     563879 (rnf115b)
Membrane trafficking [BR:dre04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    563879 (rnf115b)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    563879 (rnf115b)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_11 zf-C3HC4 zf-RING_UBOX zf-ANAPC11 Zn_ribbon_19 zf-RING_5 zf-rbx1 zf-C3HC4_3 U-box_ZFPL1 C1_2 Rad50_zn_hook DUF7560
Other DBs
NCBI-GeneID: 563879
NCBI-ProteinID: XP_003200594
ZFIN: ZDB-GENE-060503-608
Ensembl: ENSDARG00000062900
UniProt: F1QQA9
LinkDB
Position
19:10065146..10080658
AA seq 301 aa
MAEAAAAPRHRFFCHCCKGEIDPKLPEYVCPRCESGFIEEVSENFSLLQNRDGAAGTGSD
DMTSQFAELWQLLFMEHSALLSEPSVTDALRSSGLQPAVADPASGTAGPVASVESLSDCT
EPQQNSPQTNSRQDQGQAVEGIVQQFLAGLFSNSDSAGPQTSSWSSALHSNPGDYAWGQG
GLDAVVTQLLGQSENSGPPPAEKEMISSLPTVSISSEQAACRLECPVCREEFSVGESVRQ
LPCLHYFHSSCIVPWLQLHDTCPVCRKSLDGEDRGFQPRPDPQETIPSPPDLPERSTFET
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcggaggccgctgctgctccacgacaccggttcttctgtcactgctgtaaaggtgaa
atagacccaaagctaccggaatatgtatgtcccagatgtgaatctggctttattgaagag
gtgtcagaaaacttcagtcttcttcagaatcgggatggtgctgctgggacaggcagtgat
gacatgacctcacagtttgctgagctgtggcagctgctcttcatggagcattcagccctg
ctctccgagccctcggtcacagacgcgctccgcagctccgggctccagccagcagttgct
gatcctgcctctgggacggcgggacctgtggcatccgtcgagagtctgtcagactgcacc
gagcctcaacaaaacagcccacagacaaactccagacaggatcagggacaggctgtggag
gggattgtacagcagttcctggcaggtctgttttccaattcagacagtgcaggtccccaa
acctcctcatggtccagcgcgctgcactcaaaccctggagactatgcttggggacaggga
ggtttggatgcggtcgtaacacagttgcttggtcagtctgaaaacagcggcccccctcct
gccgagaaggagatgatctcatctctgcccaccgttagcatctcctcagagcaggctgca
tgccggctggaatgccccgtgtgtcgagaggagttttctgttggggaatctgtccgacag
ctgccgtgtctgcactactttcacagcagctgtattgtgccctggcttcaactgcacgac
acctgtcctgtctgtcggaagagtctggatggtgaagaccggggttttcaaccacgacca
gatcctcaagaaacaatcccatcacctccagatttaccagaacgaagcaccttcgagact
ctttag

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