Danio rerio (zebrafish): 563892
Help
Entry
563892 CDS
T01004
Symbol
cald1b
Name
(RefSeq) caldesmon 1b
KO
K12327
caldesmon
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
563892 (cald1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
563892 (cald1b)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
563892 (cald1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
563892
NCBI-ProteinID:
NP_001307388
ZFIN:
ZDB-GENE-090313-229
Ensembl:
ENSDARG00000086391
UniProt:
E7EZ62
LinkDB
All DBs
Position
25:20140926..20211831
Genome browser
AA seq
560 aa
AA seq
DB search
MDEDFDFERRRELRRQKREEMQREAEKMNSYDDDEEAARERRRRARQERLRNMENEESSN
ITTESNSTETSSLINSSEPAEDDDDQALLERIAKREERRQKRMKEALERQKELDPTITNG
TESTSAATENEPNTRRDDQESSRNDLTSTETNSWKEKEELKVEEKLQERNVDVEETVPVQ
EETVPEEPKASLEEINKPDDEDRPTRSYLREQESMEEKPKEPTNKVVEEKSKPSFLRDRL
KVSTKPQDLPDSTAKAKKQESTLSPSRLRSPETEKQDPIAKLEAERKLQELKRRRNETDS
EALEKMKQKQQTAEAELEELRKKREERKKVLEEEEKQKKQQQADKRAKEEEERRKMKEEI
ERRRAEAAEKKKQKEESKEGSKVAFIAPKGASAKIGEKAEFLNKSALKSPIKTSHTPLVC
KIGNRLEQYTSAVQTKEVTKSPKSPVDVPVAEGLRSIKSMWEKGNVVNPTPSPASPPVAT
KETAGLNIGVAGRINSWKTKTPEPKPAEPKPAPEPEKTPAKTEQKPAEVTKPRGSWETKG
STPAKVFAAKSKFVTNGTRK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggattttgattttgagcgtcgcagagagttacgacgacaaaagcgagaagag
atgcagcgcgaggcagagaagatgaactcttatgatgatgatgaggaggcggctcgcgag
cgccggagacgagctcgtcaagaacgcctgcgaaacatggagaatgaagagtccagtaat
attacaacagaaagcaacagcacagagacatcttcattgataaatagttctgaaccagcg
gaggatgatgatgaccaggctcttctggaaaggattgccaaaagagaggaaagaagacaa
aaaaggatgaaggaagctttggagagacagaaggaacttgatcccaccatcacgaatgga
accgaaagcaccagcgctgccacagagaatgagccaaatactagaagagacgatcaagag
tcatccagaaatgatctcacttcaacagaaaccaactcttggaaggaaaaggaagagctt
aaagtggaggaaaagctacaggagagaaatgttgacgttgaggagacagtcccggtacag
gaggaaacagtgccagaggaacccaaagcatctcttgaggagataaacaaaccagacgat
gaggacagaccaacaaggtcctatctcagagaacaggaatccatggaagagaaacccaaa
gaaccaacaaacaaggttgtggaggaaaaatccaaaccgtcctttttacgtgacagactg
aaagtgtcaacaaagccgcaagatctacctgacagcactgccaaagccaagaaacaagag
agcacgttaagtcctagcagattgcgttctccagaaacagagaagcaggatcccattgct
aagctggaggcagagcgtaaactgcaggagctaaagcgccggaggaatgagacggacagc
gaggcgctggagaagatgaagcagaagcagcaaacagccgaggctgagctggaggagctg
aggaagaagagggaggagaggaagaaggtcctggaagaagaggagaagcagaagaaacag
cagcaggcagataagagagccaaagaggaggaagaaaggagaaagatgaaggaagagatt
gagagaagaagagctgaggcagctgagaaaaagaaacaaaaagaggagtcaaaagaagga
agcaaagtagcatttatcgctccgaagggtgcatctgcaaagattggagagaaagccgaa
tttctcaacaaatctgctctaaaaagcccgataaagacatcacacactccattagtttgc
aagattggaaacagactggagcagtacacttctgctgttcagactaaagaagtaaccaaa
tcacccaaatccccagtggatgtgcctgtggctgaagggctgcggagcatcaaaagtatg
tgggagaaggggaacgtggtcaatcccaccccgagccctgcaagccccccagtggccact
aaggaaacagctggtctaaacattggtgtggctggacgcattaacagctggaaaaccaaa
actccagagccaaaacctgctgaacccaaaccagctcctgaaccagaaaaaacacctgcc
aaaacagagcagaaaccagctgaggtcactaaaccacgtggttcatgggaaacaaagggc
tccacacctgctaaggtgtttgcagccaaaagtaaatttgtgacaaatggaacaaggaaa
taa
DBGET
integrated database retrieval system