KEGG   Danio rerio (zebrafish): 563892
Entry
563892            CDS       T01004                                 
Symbol
cald1b
Name
(RefSeq) caldesmon 1b
  KO
K12327  caldesmon
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04270  Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:dre00001]
 09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    563892 (cald1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:dre04812]
    563892 (cald1b)
Cytoskeleton proteins [BR:dre04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     563892 (cald1b)
SSDB
Motif
Pfam: Caldesmon
Other DBs
NCBI-GeneID: 563892
NCBI-ProteinID: NP_001307388
ZFIN: ZDB-GENE-090313-229
Ensembl: ENSDARG00000086391
UniProt: E7EZ62
LinkDB
Position
25:20140926..20211831
AA seq 560 aa
MDEDFDFERRRELRRQKREEMQREAEKMNSYDDDEEAARERRRRARQERLRNMENEESSN
ITTESNSTETSSLINSSEPAEDDDDQALLERIAKREERRQKRMKEALERQKELDPTITNG
TESTSAATENEPNTRRDDQESSRNDLTSTETNSWKEKEELKVEEKLQERNVDVEETVPVQ
EETVPEEPKASLEEINKPDDEDRPTRSYLREQESMEEKPKEPTNKVVEEKSKPSFLRDRL
KVSTKPQDLPDSTAKAKKQESTLSPSRLRSPETEKQDPIAKLEAERKLQELKRRRNETDS
EALEKMKQKQQTAEAELEELRKKREERKKVLEEEEKQKKQQQADKRAKEEEERRKMKEEI
ERRRAEAAEKKKQKEESKEGSKVAFIAPKGASAKIGEKAEFLNKSALKSPIKTSHTPLVC
KIGNRLEQYTSAVQTKEVTKSPKSPVDVPVAEGLRSIKSMWEKGNVVNPTPSPASPPVAT
KETAGLNIGVAGRINSWKTKTPEPKPAEPKPAPEPEKTPAKTEQKPAEVTKPRGSWETKG
STPAKVFAAKSKFVTNGTRK
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggatgaggattttgattttgagcgtcgcagagagttacgacgacaaaagcgagaagag
atgcagcgcgaggcagagaagatgaactcttatgatgatgatgaggaggcggctcgcgag
cgccggagacgagctcgtcaagaacgcctgcgaaacatggagaatgaagagtccagtaat
attacaacagaaagcaacagcacagagacatcttcattgataaatagttctgaaccagcg
gaggatgatgatgaccaggctcttctggaaaggattgccaaaagagaggaaagaagacaa
aaaaggatgaaggaagctttggagagacagaaggaacttgatcccaccatcacgaatgga
accgaaagcaccagcgctgccacagagaatgagccaaatactagaagagacgatcaagag
tcatccagaaatgatctcacttcaacagaaaccaactcttggaaggaaaaggaagagctt
aaagtggaggaaaagctacaggagagaaatgttgacgttgaggagacagtcccggtacag
gaggaaacagtgccagaggaacccaaagcatctcttgaggagataaacaaaccagacgat
gaggacagaccaacaaggtcctatctcagagaacaggaatccatggaagagaaacccaaa
gaaccaacaaacaaggttgtggaggaaaaatccaaaccgtcctttttacgtgacagactg
aaagtgtcaacaaagccgcaagatctacctgacagcactgccaaagccaagaaacaagag
agcacgttaagtcctagcagattgcgttctccagaaacagagaagcaggatcccattgct
aagctggaggcagagcgtaaactgcaggagctaaagcgccggaggaatgagacggacagc
gaggcgctggagaagatgaagcagaagcagcaaacagccgaggctgagctggaggagctg
aggaagaagagggaggagaggaagaaggtcctggaagaagaggagaagcagaagaaacag
cagcaggcagataagagagccaaagaggaggaagaaaggagaaagatgaaggaagagatt
gagagaagaagagctgaggcagctgagaaaaagaaacaaaaagaggagtcaaaagaagga
agcaaagtagcatttatcgctccgaagggtgcatctgcaaagattggagagaaagccgaa
tttctcaacaaatctgctctaaaaagcccgataaagacatcacacactccattagtttgc
aagattggaaacagactggagcagtacacttctgctgttcagactaaagaagtaaccaaa
tcacccaaatccccagtggatgtgcctgtggctgaagggctgcggagcatcaaaagtatg
tgggagaaggggaacgtggtcaatcccaccccgagccctgcaagccccccagtggccact
aaggaaacagctggtctaaacattggtgtggctggacgcattaacagctggaaaaccaaa
actccagagccaaaacctgctgaacccaaaccagctcctgaaccagaaaaaacacctgcc
aaaacagagcagaaaccagctgaggtcactaaaccacgtggttcatgggaaacaaagggc
tccacacctgctaaggtgtttgcagccaaaagtaaatttgtgacaaatggaacaaggaaa
taa

DBGET integrated database retrieval system