KEGG   Danio rerio (zebrafish): 563926
Entry
563926            CDS       T01004                                 
Symbol
per1a
Name
(RefSeq) period circadian protein homolog 1a
  KO
K21944  period circadian protein 1
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dre03400]
    563926 (per1a)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    563926 (per1a)
SSDB
Motif
Pfam: Per3-like_PAS-A Period_C bHLH_PER PAS_11 PAS_3 PAS
Other DBs
NCBI-GeneID: 563926
NCBI-ProteinID: NP_001025354
ZFIN: ZDB-GENE-011220-1
Ensembl: ENSDARG00000056885
UniProt: Q7SZZ4
LinkDB
Position
10:complement(22810768..22831490)
AA seq 1229 aa
MTDNQSLCPGLNITNESQQTHSGDTDAQSSGIDSTERENDGRLGHGTSTCSSLHGKGSAT
ETTESKSSNGNSPSPPSSSVSFSLLSGSSEQDHSTSQASNSDQPARLQTQRELLKVLREL
KIHMPAERRRKGRSSTLASLQYALSCVKQVRANQEYYHQWSVEESHGCCLDLSSFTIEEL
DNVTSEYTLQNTDTFSVAVSFLSGKVVYISSQAASLLRCKAERLQGALFSELLAPQDVST
FYSSTAPSRLPPWSSCAGTSSQVDCAEEKSMFCRISRGRDSNGEVKYHPFRLTPYQLTLR
DSDTSQPEPCCLLIAERVHSGYEAPRIPADKRIFTTSHTPNCLFQEIDERAVPLLGYLPQ
DLVGKPVLVYLHPEDRLLMVAIHKKILQFAGQPFDHSPLRMRARSGEYLTIDTSWSSFIN
PWSRKVAFIVGRHKVRTSPLNEDVFTAPEGEEMKTMSPDVPQLNELIHRFLVQPVYGGSS
QGYGSLGSSGSHEHQQGATSSSESNGHTSEDQIKPRKPMTFEQICQDMHMVKTSGQQVFI
ESRNRPPALKQGSLEALAKAADTAEASARDGLASLALSSPPRKELPMIYSYQQINCLDSI
VRYLESFNVPGTVKRKCGSSSCTTSSTSDDDKQREGAGATQAETLVVTEGSKVVPAAPAH
PLTPLALHCKAESVVSATSQCSFSSTIVHVGDKKPPESAVHEKEKEKERRSGGSAGKGLT
KAVLSAHTQQEEQAFLNRFRDLSQLRMVQPSGLPPPRRCTSIPGTKGVNSSQNYPSVGNT
SSRRHGRGGKRQKHQVDGNIPNNTPISASGPYRGPNPAQIRPNFPSVQQSSNSWAPSAAS
QTNGAPVGTSFPPSYMTMFPTSSPFSVTQMGTDPSLQTGVPRFPAQGFPSVMPPVMTFMM
PNYMFPQLSNPGSQLNPANSQLNAQMNSFGQFPPPVVQMSVPMFNPAMGQFYPLGSQMNP
AMPAMIPQQFYNPNYQLNFSNSPSMPAANVSTTPHGQSRSSTPQSTGPQAGERDGAGSPL
FQSRCSSPLNLLQLEELPSNRTDATQQTPPPGGSSNTSKYFGSIDSSENDQNHKPASGDL
GGEQFIKFVLQDPIWLLMANTDDKIMMTYQIPIKDKDSVLKEDRDALKAAQKHQPHFTEE
QKKELTQVHPWIQTGCLPKAINVTSCTGCESPPDSSTLPPFDLEFHEMDLNVVLREEAKQ
EDKLAETAFPLSPPSSDNEQRDNQANLST
NT seq 3690 nt   +upstreamnt  +downstreamnt
atgaccgacaatcaatctctatgtcctgggctgaacatcacgaatgaatctcagcaaaca
cattcaggtgacaccgatgcccagtccagcgggatcgactcaacggagagggagaacgat
ggacgtttgggacatggaacctcaacctgtagctcactgcacggaaaaggctcagccaca
gagacgacggaaagcaagagctcaaatggaaacagtccgtctcccccgagcagctcagtg
tcattcagtcttttgagcggaagttcagagcaggatcattcgacatcccaagcatccaac
agtgaccaaccagcccgacttcagacccagagagagctgctaaaagtcctgcgtgagctg
aagatccacatgccagcagaacggcgcaggaaaggccgatctagcacactagcatctcta
cagtacgcacttagctgtgtcaaacaagtcagagctaatcaagagtactaccatcagtgg
agtgtggaagaaagccatgggtgttgtttggacctgtcatcatttactattgaagagcta
gacaacgttacgtcagagtacacccttcaaaacacggacacgttctcggtggcggtgtca
tttctgtctggtaaagtggtgtacatctcatcccaggcggcctctctgttgcgctgtaaa
gctgagaggctgcagggggcgctgttttcagagctgctcgcgcctcaggacgtcagcacc
ttttacagcagcactgctcccagccgtctaccgccgtggtcctcctgtgctggaactagc
tcacaggtggactgtgctgaggaaaagtcaatgttttgccggatcagcagaggcagagac
agcaatggagaggtgaagtatcaccccttccgtctcacaccatatcagctcactctgaga
gactccgacacgtcccagcctgagccctgctgcctgctcatcgcagagagagttcattct
ggatacgaagcgcctcgtatcccagcagacaagagaatatttaccaccagtcacaccccg
aactgtctcttccaggagattgatgaaagggctgtgccattattaggttatctgcctcaa
gacttggttgggaaaccggtgcttgtttacctgcatccagaagacagactgctcatggtg
gccattcataagaaaattcttcagtttgccggacaaccttttgatcactcgcccctgcgt
atgcgtgcaagaagtggtgaatatctgaccattgataccagctggtcttcctttatcaac
ccatggagcaggaaggtggctttcatagtgggacgccacaaagttcgaacgagtccgcta
aatgaggacgtgttcactgctcctgagggtgaagagatgaaaaccatgtctccagatgta
ccgcagctgaatgaactgatccacaggttcctggttcagcccgtttacggtggcagctca
caggggtacggcagcctgggcagtagtggctcacatgagcaccagcaaggtgcaacttcc
tcctctgagagtaatggacatacatctgaggaccagatcaagcccaggaaaccaatgaca
tttgagcagatttgtcaagacatgcacatggtaaagaccagcggacagcaagttttcatt
gaatcacgaaaccgaccaccagctcttaaacagggcagcttagaagcactggcaaaggca
gcagatacagcagaggcctctgctagagatggtctggcaagtttagcactgtccagtcca
cccaggaaggagctgcctatgatctactcataccagcagatcaactgcctggacagcatc
gtacgatatctggagagctttaatgtccctggcactgtgaagaggaagtgtggctcttcc
tcttgtacaacctcttctacctctgatgatgataaacaaagggaaggagctggagcaacc
caagcagagactcttgtggtgaccgaggggtcaaaggtcgttcctgcagcaccggcacac
cctctaacccctcttgctctacactgtaaggccgaaagcgttgtctcagccacttcgcag
tgcagtttcagcagtactattgttcacgttggtgacaagaagccgcctgaatcagctgtg
catgagaaagaaaaggagaaagagaggagaagtggaggaagcgcagggaagggtctcacg
aaagccgtgttatccgcacatactcaacaagaagagcaagccttcctcaaccgcttcaga
gacctcagccagctgcggatggtccaacctagtgggctgccaccaccacgcagatgcaca
tctatacctggaacaaaaggagtgaacagctcccagaactatccttctgtaggcaacacc
agcagtcgtcggcatggcaggggtgggaaaagacagaaacatcaagtagatggcaacatt
ccaaacaataccccaatttctgcatctggcccctatagaggacctaatcctgctcagata
agacccaacttcccctctgtccagcaatcttccaactcttgggctccatctgctgcatcc
caaaccaacggtgctccagtgggtacatcttttcctccaagctacatgaccatgtttcca
acttcctcaccattctcagtaacccagatgggaactgatccttccctgcaaacaggagtc
cctagatttccagcgcaaggctttccttcagtgatgccaccagtcatgacattcatgatg
cccaactacatgtttccacaactctctaatccaggatcacagttgaacccagccaactcc
cagctcaacgcccaaatgaactcctttgggcagttccctccccctgttgttcaaatgagt
gtaccaatgttcaatcctgcaatggggcaattttatcctttgggctcccaaatgaaccct
gctatgcctgcaatgattccccagcagttctacaacccaaattatcagttaaatttttcc
aactctccatcaatgcctgctgcaaatgtcagcactacaccacatggacagtctcgctcc
agcacaccccagtccactgggccacaggctggtgagagggatggggctggatctcctttg
tttcagtctcgatgctcttccccacttaatcttctacaacttgaggaattgccaagcaac
agaacggatgctacacaacagactccacctccaggggggagcagtaatactagcaagtac
tttggaagcatagactcctcagagaatgaccagaatcacaaaccagcatctggagacctg
ggaggggaacagtttatcaaatttgtcctgcaggacccaatatggctcctcatggccaac
acagatgacaagatcatgatgacataccagattcctatcaaagacaaagattcagtactg
aaagaagacagagatgccctgaaagctgctcagaagcatcagcctcactttacagaagag
cagaagaaagaattaactcaggttcacccgtggattcaaactggctgcctaccaaaagcc
attaacgttacatcttgtacaggatgtgaatctcccccagattcctccactcttcctcca
tttgatttggaattccatgaaatggatctcaatgtagttttgagggaagaggccaaacaa
gaagataaacttgcagaaacagcctttcccttgagccccccgtcatctgataatgaacaa
agagacaaccaggccaacctgagcacatag

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