Danio rerio (zebrafish): 563983
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Entry
563983 CDS
T01004
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dre01002
]
563983 (usp43a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
563983 (usp43a)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
563983 (usp43a)
Peptidases and inhibitors [BR:
dre01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
563983 (usp43a)
Ubiquitin system [BR:
dre04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
563983 (usp43a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
563983
NCBI-ProteinID:
NP_001082871
ZFIN:
ZDB-GENE-100211-1
Ensembl:
ENSDARG00000103494
UniProt:
A3KQN0
LinkDB
All DBs
Position
6:complement(19477888..19665198)
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AA seq
1122 aa
AA seq
DB search
MDSLRETRKQTIKAKSAKRKNKTHKSQKLFRRKSLKSLGNFMSRIVKTLGTLAHLGDADQ
PDAAAEDDDGGFGDTASVHNSGNYRESSARKSSSYGSVKERLSWCYGEKTPGVQGLKNHG
NTCFMNAVVQCLSNTELLAEYLGLEQYKYELNERRINGMMKSEEVRGEVTDKLASLVRAL
WTNDYTPQLSVDFKSVVAKYGSQFKGNAQHDALEFLLWLLDCVHEDANLSTNNNQSRNSS
SSKPGTRHSFVQEHFQAQYRSSLTCPHCLKQSNTFDPFLCISLPIPLRQTRALNVTLVFS
TEGQRFLRIGLAVPLFGSISTLRAMVAEEGKLSPDQVILTEMNSGGFQRSFSDEDDMTSI
SESDVIYAFQVPPHFTRGGSMRFSDFKGHRLPPSGTLSTEFLNHGGSSKVLLLICNVAGS
GQQATRFGPPFLMRVERTLSWDHLQQSVCNKLYVFQKTAIIKVSTTELFKVRVVGGSASC
SYLSPHDSRPLCHPTVDRALKLCGPGGPLHVKLIIEWDNKIKECLFGNIQEEVIEDAESV
RIQQQNHVQQHSCTLDDCFQLYTKEEQLAPDDAWKCPHCKQMQQGMVKMSLWTLPDILIL
HLKRFRQVGKRRNKLSTLIRFPVSALDMTPHVVKRSQSMKNLAPLPSTWKHGETDFLYDL
YAVCNHHGGMHGGHYTAYCRNSVDGHWYSYDDSSVEIVPEEELCTRGAYILFYQRRNVIP
PWSANSSVRGSTSSSMSDHWLIRLNGDSKRGSMVSRSSTTCPSSIADSPESPVFKNEPSI
EERGGFESRPFVRGIQGRSVSMRSPTKTKVLPLRWSFGNKDRHKPVPASEQSPAELVEYL
ESGRRPRCTKDPIVSLMTRPSDKDNDAKKTAKSSSHSGLRPPEYLKIPQGQERGSSEKAM
GQQPASSSRSREEGTLTRRSSRKSKPDQSHSRKSSGAGIQSSCSTPSGWETAQKHESSDK
RDQSEDKHKKGQETKRHDVFAFLKGGFIKKDSLRKSRDNDSVKKADSGVKSPSGVSLSNG
THSRNPEGNVSTMNHGSRHGSELANGKVSRGSSDIKRSQSSSNIQSKTDLGLRRTASLHK
NGTSVAQPQSVTGDRGSQSTLQRTRYSTNSLGRKKAVPESSF
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggattcgctgagggaaaccaggaaacaaacaatcaaagctaaatcggcgaagcgcaag
aacaaaacgcacaagtcccaaaagctgttccgaaggaaatcgttaaaatcgctgggaaat
tttatgagcaggattgtcaaaactttgggcactttggcacacttgggggacgcggatcag
ccggacgcagcagcggaggatgatgatggtggatttggagacacggcgagtgtccacaac
tctgggaactacagagagagctcggcgaggaaaagctcttcttacgggtctgtgaaagaa
agactgtcctggtgttacggagagaaaacaccgggagttcagggtctgaagaatcacgga
aacacctgttttatgaacgctgtggtgcagtgtctgagtaacacagaacttctggctgaa
tatctgggtctggagcagtataaatatgaattaaatgagcggaggatcaacgggatgatg
aagagtgaggaggtcagaggggaagtcacggacaagctggcatcgttagtaagggcgctc
tggacaaacgactacacgcctcagctgtcggtggattttaagagtgttgtggccaagtat
ggctctcagttcaaaggaaacgctcaacatgatgctttagagtttctgctctggcttctg
gattgtgtgcatgaggacgctaacctctccaccaacaacaaccaaagcagaaatagttca
tccagcaagcccggaactcgacacagttttgtacaggagcacttccaagcccagtacagg
tcatccttgacatgcccgcattgccttaaacagagcaacacttttgaccctttcctgtgt
atttcccttccaatcccgctgcgacagaccagggccctgaatgtgactctggtgttcagc
acagaaggtcagcggtttctgagaatagggctggctgtgcctctctttgggtctatttca
acactcagggccatggtagcagaggagggcaagctctctccagaccaggtaattttgaca
gagatgaactcgggtgggttccagcgctctttctctgatgaagatgacatgaccagtata
tcagagagtgatgtcatctacgccttccaggttccccctcacttcaccagaggaggttcc
atgcggttctcagatttcaaaggtcacaggctaccgccatcagggacgttatcaacagaa
ttcttgaatcatgggggctcttcaaaagtccttctcttaatctgcaatgttgctggctct
ggccaacaggctacaaggttcgggccaccatttctgatgagagtagaaagaactctttct
tgggatcatctgcaacagagcgtctgcaataagctttacgtttttcaaaaaactgcaata
ataaaggttagtactactgaactgtttaaagtgcgtgtggtgggtggatcagcctcctgc
agttatctgtctccgcacgacagcagacctctgtgccatcccaccgtagacagagccctc
aagctatgtggtccaggtggtcctttgcatgtgaagctcataattgaatgggacaacaaa
attaaagaatgcctctttggcaatattcaagaggaggtgattgaggatgcagagagtgtg
agaatccagcagcagaatcatgtacaacagcacagctgcacactggatgactgttttcag
ctctacaccaaagaggagcagctggcaccagacgatgcatggaagtgcccccactgtaag
caaatgcagcagggaatggtgaagatgagtttatggacactgcccgacatcctcattctg
cacctgaagcgttttcgacaggtgggcaaacggcgaaacaagctctccaccctcattcgc
tttcctgtaagtgctctggatatgaccccccatgtggtgaaacgcagtcaaagcatgaag
aatctggccccgttgccttcaacttggaagcatggagaaactgactttctttatgacttg
tatgcagtttgcaaccaccacggaggcatgcatggaggccattacacagcctattgcagg
aactccgtggacggccactggtacagttatgatgacagcagtgtggagattgtgccagag
gaggaactgtgcacacgaggggcttatatcctgttctaccagaggagaaatgtcatccca
ccctggtctgccaacagctcggtcagaggttccaccagctcctcgatgtcagatcactgg
ctcatccgtttgaatggtgacagtaaaagaggaagtatggtttcacgatcttctacaaca
tgcccttcttccatcgctgactccccagagtcaccagtttttaaaaatgaaccctcaatt
gaggaaagaggtgggtttgaaagcagaccttttgtgcgaggaatccaaggtcgtagtgta
agcatgagaagtcccaccaagactaaagtgctcccactgcgatggtcttttggaaataaa
gaccgccacaaacctgtgccggcttctgagcagtctcctgcagaactggtggagtattta
gagtctgggaggagaccaagatgtaccaaagaccctattgtttccctaatgactcgacct
tcagacaaagacaacgatgcaaaaaaaacagccaaatcttccagccacagtggcctcaga
cctccagaatatctgaaaataccacagggtcaagaaagaggtagctcagagaaagcaatg
ggccaacaacctgccagcagcagtagatcaagagaagaagggaccttgaccagacggagc
agcagaaaatctaaaccggaccaatcacactccaggaagagctctggagcagggatccag
tccagttgtagtactccaagtggctgggaaacagcacagaagcatgagtcgagtgacaag
cgtgaccaatcagaggataaacataaaaaagggcaggagactaaacgtcatgatgtcttc
gcttttctcaaaggtggctttatcaagaaggattcccttcggaagtctcgggataatgat
tctgtcaaaaaggctgattcaggggtgaagagcccatctggagtttccctctccaacggg
acacatagtagaaatccagaaggtaatgtcagtactatgaaccatggtagcaggcacgga
agtgaactggcaaatggcaaggtgagtcgtggttcctcagacatcaaacgctcacaaagc
tcatccaatattcaaagcaaaactgatctaggcttaagaagaacagcatctttacacaaa
aacggcacatcggtggcccaaccacagagtgtgaccggggacaggggctctcagagcact
ttacaacgcacacgctacagcacaaactcactgggcagaaagaaggcagtgcctgaatca
agtttctaa
DBGET
integrated database retrieval system
