Danio rerio (zebrafish): 564097
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Entry
564097 CDS
T01004
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dre04990
]
564097 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
dre04990
]
Other domain-containing proteins
Patched domain-containing proteins
564097 (ptchd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
564097
NCBI-ProteinID:
NP_001025356
ZFIN:
ZDB-GENE-041001-178
Ensembl:
ENSDARG00000008249
UniProt:
Q5RIV7
LinkDB
All DBs
Position
20:complement(39341253..39490543)
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AA seq
897 aa
AA seq
DB search
MLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTVLSRFKPETDLEILVAPT
HSLAKIERSLANSLFPIDQSKHKLYSDLHTPGRYGRLILLARSGGNILELAEQVLQVHKK
VLDMRVNYKGFNYTFAHLCVLRHRDKRCLLDDIITIFEDIRLAVLSNSTFSKVPVSYPNT
TLKDGRVSFIGHQLGGVALPANNRDQQVKFARAIQITYYLRNLGPVVQDIIAEKWETEFC
KLVHQLATDSQELHIQSLTSFSLWRDFHKTGVLAKSEVLVSLVLVLLAATISSSMRDCLR
GKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGIPFFAMGHGTKGVFELLAGWRRT
RESLPFKERVADAFADVMVCYTMTSSLYIITFGMGASPFTNIESVKVFCQSMCVAVLVNY
FYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDRQPTWFKTMMSDGHDLSTHHDSV
PYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASFSFMGCLQISDGSNIINLLASNS
PSVSFALTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEHLKTLGQGFNKISWIDNYFHFLR
VVNISASTKSDFISILKTSFLRSPEYQHFVDDIIFSKNGAEYDIIASKMYLVARTTEKTR
EEVVELLERLRPLSLINSIKFIVFNPTFVFMDRYSSSIISPILTSGFSVLTILILTFFLV
INPLGNFWLILTVTSVELGVLGLMTLWNVDMDSISILCLIYTLNFAMDHCAPHLYTFVLA
TEHTRTQCIKISLEEHGAAILQNTSCFVIGIMPLLFVPSNLTYTLFKCSLLTAGCTVLHC
FVILPVFLTFFPPSKKRHKKKKRAKRKEREREREREREREEIECIEVRENPDHVTNV
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaagtgatacacagagggctgaaagcttccttctactggctgggtttgttc
gtgagcaggcatccggtgttcttcctcaccgtccccgcagtcctgaccatcattttcgga
tccacggtgctgagccgctttaagcccgaaacggacctggagatcctggtcgccccgacg
cacagcctcgcgaagatcgagcggagtctcgccaacagcctcttccccatcgaccagtcc
aagcacaagctgtactcggacctgcacacccccggcagatatggcagactcattctgctg
gccagatccgggggaaatatcttggagctggccgagcaggtgctccaggtgcacaagaag
gtcctggatatgcgtgtcaattataaaggcttcaattacactttcgcgcatctctgtgtc
ctgaggcaccgggacaagagatgcctgttggatgatatcatcaccatatttgaagacatt
cgcttagctgttttgtctaacagcactttttccaaggtccccgtgagctatccgaacacg
acgttaaaggatggtcgggtgtcctttattggccatcagctgggcggtgtggccttgccc
gcaaataaccgggaccaacaggtcaagtttgctcgcgccatccaaatcacctactacctc
cgcaaccttggcccagtggtgcaggacatcattgctgagaagtgggagactgaattctgt
aagctggtgcaccaactggctacagacagccaggaactacacatccagtcgctcacgtcc
ttcagcttatggcgggacttccacaagacaggcgtattggccaagagcgaggtgctggtc
agcttggtgctggtgctcttggcagccaccatctccagctctatgcgggactgcttacgc
ggaaagccttttctgggcctgttgggcgtcctcaccatctgcatcgccaacgtgacggca
gctgggatttttttcatctctgatgggaaatttaactctacgctgctcgggatccccttt
tttgccatgggacatgggacgaagggtgtgtttgagcttctggcaggctggagaagaacc
agagagagtttgcccttcaaggagagagtggcggatgcgtttgctgatgtgatggtgtgc
tacactatgaccagctcgctctacataatcaccttcggcatgggcgccagtcctttcacc
aacattgagtctgtgaaagtcttttgccagagcatgtgtgtagcagtactggttaactac
ttttatgtattctccttctacggctcctgcctggtgtttgccgggcagctggagcaaaac
cgatatcacagcgtcttctgctgcaagatcccctcagtggagtatctggaccgccagccc
acttggtttaagaccatgatgagcgacggccatgatctgtctacacaccacgacagtgtc
ccgtaccagaaccacttcattcagcacttcctaagggagcattacacagaatggataacc
aacacctacgtcaagcctttcgtggtgatcctctacctgatttatgcctcgttttcgttc
atgggatgtttacaaatcagcgacggctcgaacataattaacctgctagctagcaattcg
cccagtgtgtcgttcgccctgacccagcagaaatacttcagcaactacagtcctgtgatt
gggttttacatctacgaacccatcgaatattggaactccacagtacaggagcacctcaag
acactgggacagggctttaataagatttcctggatcgataattactttcactttctgagg
gttgtgaatattagcgcgtccaccaaaagtgacttcattagcatccttaaaacttctttc
ctgaggagcccagaatatcaacactttgtggacgacatcattttctccaaaaacggagcc
gagtatgacattattgcatccaagatgtacttggtggccagaacgaccgaaaaaaccagg
gaggaggtcgtggagctgctggagagacttcgacccctctcccttataaacagcatcaag
ttcatcgttttcaacccaacgtttgtgttcatggaccgctacagttcctccatcatctct
ccaatcctgacgtcaggtttcagcgtgctcaccattctcatcctcaccttcttcctggtc
atcaacccgctggggaacttctggttgatcctgaccgtcacctccgtggagttgggcgtc
ttgggtcttatgacgctctggaatgtagacatggacagcatctcaatcctgtgccttatt
tatactctcaactttgccatggatcactgtgccccccacctctacacgttcgtactggcc
actgagcacacacggactcagtgcatcaagatctctttagaggagcatggggctgccatt
ttgcagaacacctcgtgttttgtgattgggataatgcctcttctttttgtgccttctaac
ctgacctacacactgttcaagtgctcgcttctcaccgccggctgcacagtgctgcactgt
ttcgtcatccttccggtgtttttgacattcttcccaccctccaagaagcgccacaagaaa
aagaaacgggccaagcggaaagagcgggaaagggagagagagcgggagagggagagagag
gagatcgagtgcattgaagtcagggaaaacccagaccatgtgaccaatgtttga
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