Danio rerio (zebrafish): 564359
Help
Entry
564359 CDS
T01004
Symbol
pax1a
Name
(RefSeq) paired box protein Pax-1a
KO
K09382
paired box protein 1/9
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
564359 (pax1a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
564359 (pax1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_29
Motif
Other DBs
NCBI-GeneID:
564359
NCBI-ProteinID:
NP_001074061
ZFIN:
ZDB-GENE-070112-182
Ensembl:
ENSDARG00000008203
UniProt:
A0A8M1NCV8
A1L2C3
LinkDB
All DBs
Position
17:42274332..42286926
Genome browser
AA seq
354 aa
AA seq
DB search
MEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKNIRDYKQSDPGIFAWEIRDRLLADGVCDKYNVPSV
SSISRILRNKIGNLSQPNPYENGKQAPPQSSLSYNHIYPYSYPNAMSPSGTKMSSPPGVP
VTGGHVSISRGWPSAHTVSNILGIRAFMDPTAIASAEGYAPKMEDWGVNRATFQSHGVNG
IDKSSIDADIKYPQPSSTLSSYVPACAYSPSNQYGVYSGPAGGYVSPGHHWQAQGTSLTH
PGGGVAMHPSDIHSSMAFKHAVRDGDRKPPSPLSKQQHEALSGIHGLSLSTSSS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacatacggggaggtgaaccagctggggggagtttttgtcaatggacgccct
ttgcccaacgcaataagattacgaatagtggagttagcccagcttggcatccgaccatgt
gacataagcagacagcttcgggtctctcatggttgtgtgagtaaaatccttgcgagatac
aacgaaacagggtccattttgcccggtgccatcggtggcagcaaaccacgagttacgacg
ccaaatgtagtgaaaaacatacgggactacaaacaaagtgacccgggaatttttgcatgg
gagatccgggaccgtctcctcgcggacggagtatgtgataagtacaacgtgccttcggtc
agctctatcagccggatattaaggaacaagattggaaacctctcccaacctaacccatat
gaaaatggcaagcaagcaccaccgcagtccagcctttcctataaccacatatacccgtat
tcataccccaatgcaatgtctccttccgggacaaaaatgagcagtcctcctggtgtccct
gtaacgggtgggcatgtaagcatttcccgtggttggccttcagcccatacggtcagcaat
atattgggcattcgggctttcatggatcctacagctattgctagcgctgaaggatacgca
ccgaaaatggaggattggggtgtcaatagagcgacatttcaaagtcatggagtcaatgga
atagacaaatcatccattgatgcagacataaaataccctcagccttcgtcgaccctgtct
agctatgtcccggcgtgcgcgtactctccctccaaccaatacggcgtgtacagtggtcca
gcaggcggttatgtgagtccaggtcaccattggcaggcccagggcactagtcttacccac
cctggcggtggcgtagcgatgcacccgagtgacatccattcttctatggcgttcaaacat
gcagtacgagatggagacagaaaaccaccgagtccccttagcaagcagcagcacgaagcc
ttgtctggtatacacggactcagcctttctacctcatcctcgtaa
DBGET
integrated database retrieval system
