Danio rerio (zebrafish): 564462
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Entry
564462 CDS
T01004
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
564462 (lrrc4cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
I-set
LRR_14
Ig_3
ig
LRR_9
V-set
Ig_2
LRRNT
LRR_RPS2
DUF7617
Sp38
LRRCT
Insulin_TMD
Syndecan
Motif
Other DBs
NCBI-GeneID:
564462
NCBI-ProteinID:
XP_005166545
ZFIN:
ZDB-GENE-080327-5
Ensembl:
ENSDARG00000016739
UniProt:
F1QCU7
LinkDB
All DBs
Position
7:50053242..50111230
Genome browser
AA seq
631 aa
AA seq
DB search
MLNKMTSFHQRQMLRGPRWKGAWFDPLFLLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLKDVPDGVSTNTRYLNLQDNQIQVIKVDSFKHLRHLEILQLSRNHIRNIEIGA
FNGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDL
GELKRLSYISSGAFQGLSNLRYLNLGMCNLKEVPNIQPLIRLDELEMSGNQLTVIQPSSF
KGLVHLQKLWMMHAQVQTIERNSFDDLHSLRELNLAHNNLTFLPHDLYTPLHHLQRVHLH
HNPWNCNCDILWLSWWLRETVPTNTSCCARCNSPPSLKGRYIGELDQSYFQCYAPVIIEP
PVDLNLTEGMAAELKCRTNSVTSVSWLTPNGSIITHGTLKMRINVQNDGTLNFTNVTLQD
TGTYTCYVSNMLGNTSASAILNVTSVDNSGFSYFTTVTVETIETPIDGESRTPVQPSFGW
ASSSTTRGTPIATERAYTIPVTEIDIDGALNGLEEVMKTTKIIIGCFVAITLMAAVMLII
FYKMRKQHHQQDHDGPSRSMEIISVHEDLTRVPAMESHLTLPPLEHDHYNHYNSYKTAYN
HVSALSSLHSSVHEPLLIQASSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacctctttccatcagcgccagatgttgagaggtcctagatggaaa
ggggcttggtttgaccccttgtttctcctgcttttagccctgcagttgcttgttgtcgct
ggactggtgcgagcccaaacctgtccatccgtatgttcctgcagtaatcagtttagcaag
gtcatctgcacacgcagagggctaaaagatgtccccgatggcgtttccactaacacacgg
tatctaaacctccaggacaatcaaatccaggtcatcaaagtggacagtttcaagcatcta
cggcaccttgagatcctgcagcttagcagaaaccacatccgcaacattgagattggcgcc
ttcaatgggctgaccagccttaacacactggagctatttgacaatcgtcttacgaccatc
cccaatggcgcctttgagtacctatctaaactaaaagagctgtggcttaggaataaccct
atcgagagcataccgtctgatgccttcagtcgcttgccctcccttcgccggctggacttg
ggggagctaaagcgtctctcctacatctcgagtggagcatttcagggcttgagtaacctt
cgctacctaaatctgggcatgtgtaacctcaaagaggtcccaaacatacagcccttgatt
cgcctggatgagctggagatgtccgggaatcaactcactgtcatccagcccagctctttt
aagggtcttgttcatctccagaagctgtggatgatgcacgcccaagtccaaaccatagag
cgcaactcctttgacgacctgcactctttgcgggagctcaacctggctcataacaacctt
acctttttaccccatgatctctatacgcctttgcaccacctgcaaagagtgcacttgcat
cacaatccctggaactgcaactgtgatattctttggctgagctggtggctgagagagacc
gtaccgaccaacaccagctgctgcgcccgctgtaattcccctcccagcctcaagggccgc
tacatcggcgagctagaccagagctactttcagtgctacgcgcctgtcatcatcgagcca
cctgtcgacctcaatttgactgaaggaatggcagcagagctcaaatgccggacgaattca
gtgacttcagtcagctggctaacaccaaatggctccatcataacacatgggacactcaag
atgcgcatcaacgtccaaaatgacggaacgctaaacttcactaacgttactcttcaggac
acaggaacctacacttgctatgtaagcaacatgctaggcaacacttcggcctcggcaatc
ctcaatgtgacgtcagttgacaacagcggctttagctacttcacaacagtcaccgtagag
acaattgaaaccccaatcgatggggagagcaggacacccgtccagccttcttttggctgg
gcatcctcctcgaccacaaggggaacgcccattgccaccgagagagcgtacaccatcccc
gtgacggaaatagacattgatggtgctctcaacggtttggaggaggtgatgaagactacc
aagatcatcatcggctgctttgtggccatcacgctcatggcggccgtcatgctcataata
ttctacaagatgcgcaagcagcaccaccagcaggatcacgacgggccgagtcgcagcatg
gagatcatcagcgtacacgaggacctgaccagggttcctgccatggagagtcacctgact
cttccacccctggagcatgaccattacaaccactataactcctacaaaactgcgtataac
cacgtgtctgctctcagctcgctgcatagttcagtgcatgaacctttactaatccaagcc
agctcaaaggataacgtacaggagacgcaaatttga
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