Danio rerio (zebrafish): 564474
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Entry
564474 CDS
T01004
Symbol
slc1a8b
Name
(RefSeq) solute carrier family 1 member 8b
KO
K05618
solute carrier family 1 (glutamate transporter), member 7
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
564474 (slc1a8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dre02000
]
564474 (slc1a8b)
Transporters [BR:
dre02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
564474 (slc1a8b)
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Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
564474
NCBI-ProteinID:
NP_001177745
ZFIN:
ZDB-GENE-070912-552
Ensembl:
ENSDARG00000032465
UniProt:
D7RVS7
LinkDB
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Position
2:37110579..37122351
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AA seq
550 aa
AA seq
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MVEYFKNIVKNSVSQKIREWLKDYCKRNGLLTLSVLAVMSGCVVGFTLRSLNLSTQAKIY
FSFPGELLMRMLKMLILPLITSSLMSGLSAMDTKASGRLGLLTITYYLWTTFIAVIVGII
LVLIIHPGTGTEKEGHKAAGGPVMTSADALLDLIRNMIPSNLIEATFQQYKTELVPNFKN
SAKSSQANFVYIMPDYENPKMGHPVFLELTPPPEIHYKIVPGKSNGMNVLGIVIFSATMG
LLLGRMGSRGSPLVNVCLCINECVMKIINAAMWYFPFGIVFLVAGKILDMHDPAVLAEKL
GMYFITVLAGLFVHGVILLPLFFFVFTRKNPFSYIRGLLQALVIALATSSSSATLPITMK
CLLENCHVDRKIARFVLPVGATINMDGTALYEAVAAIFIAQVNEYELDFGQLVTISITAT
AASIGAAGIPQAGLVTMVIVLTSVGLPPDDISLIVAIDWILDRFRTMINVLGDALAAGIM
AHVCRKDFQKDMPSSGNSERRDTMISFGNQSVQSFPTSEVPLLANRDYILEVVGDQVIEK
PTACYNLCQV
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggtggaatattttaagaatattgtcaagaactcggtatctcaaaagattcgtgaatgg
ttgaaggactactgcaaaaggaacggcctgctcaccttatcagtgctagcagtgatgtca
ggctgcgtggtgggattcacattgaggagcttgaacttgtcaacacaggcaaaaatctac
ttttcctttcctggagaacttctaatgagaatgctgaaaatgttgattcttcctctcatc
acatccagtttaatgtctggcttgtctgctatggacaccaaggccagtggacgcttgggc
cttctcaccatcacgtattacctctggactaccttcatcgctgtaattgtgggcataatt
ctagtactcatcattcatcctggaaccggcactgaaaaagagggacataaagctgcggga
gggccagtgatgacctctgccgatgccctgcttgacttgatcaggaatatgattccatcc
aacctaattgaagccacatttcagcagtataagacagagcttgtgcctaatttcaaaaac
agtgcaaaatcttctcaagccaactttgtgtacatcatgccagactacgaaaaccccaag
atgggtcacccagtgtttctggaactcactcctcctcctgaaatccactacaagatcgta
ccaggaaaaagcaatggcatgaatgtgctaggaatcgtcattttctctgccactatgggt
cttctgcttggcagaatgggatccagagggtcacccctggttaatgtgtgtctttgcatt
aatgaatgtgtcatgaagatcatcaatgctgctatgtggtatttcccatttggaatcgta
ttcctggttgctggaaagatcttggacatgcacgaccctgcagtccttgcggagaagctg
ggcatgtacttcatcactgttctggcaggcctattcgtccacggtgtgattttgctgccg
ctgttttttttcgtgttcaccaggaaaaacccctttagctacattcgtggcctcctccag
gcgctggttatcgccttggcaacttcatccagttcagctactctgcccattaccatgaag
tgtttactagaaaactgccacgtggatcgtaaaattgctcgatttgtacttcctgtgggt
gctactatcaacatggatggcacagcgctgtatgaggcagtggcagctatcttcattgca
caggtcaacgagtatgagcttgactttggacaacttgtgactattagtatcacagctaca
gcagcaagcatcggagcagctggaatccctcaggctggtctcgtcacaatggttatcgtc
ctcacttcagtgggtttgcctccagatgacatctcgctcattgtggccatcgactggatc
ctggaccgatttcgaacaatgatcaatgtgcttggagatgctttagctgcaggaatcatg
gctcatgtgtgcagaaaggacttccagaaagacatgccatcatcgggcaactctgagaga
agagacacgatgatctcctttggaaaccagagtgtgcagagttttcccacatctgaggtt
ccactgctggccaacagggactacattttagaggttgtcggcgatcaggtgattgagaag
cccaccgcctgttacaacctttgccaagtctaa
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