Danio rerio (zebrafish): 564832
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Entry
564832 CDS
T01004
Symbol
grin3a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A isoform X1
KO
K05213
glutamate receptor ionotropic, NMDA 3A
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04020
Calcium signaling pathway
dre04080
Neuroactive ligand-receptor interaction
dre04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
564832 (grin3a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
564832 (grin3a)
04082 Neuroactive ligand signaling
564832 (grin3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
564832 (grin3a)
Ion channels [BR:
dre04040
]
Ligand-gated channels
Glutamate (ionotropic)
564832 (grin3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
564832
NCBI-ProteinID:
XP_073770471
ZFIN:
ZDB-GENE-130530-780
Ensembl:
ENSDARG00000075802
LinkDB
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Position
10:4971662..5006944
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AA seq
1117 aa
AA seq
DB search
MPGSWIWGALGRLMWLSFLAPSALIMILVPPASLAHPQPCQILKRIGHTVRVGALHLQPR
VFRQDSFSGRDLDWDADREMWEEWDVIFQSDHEEDWRGIRTKSSVNNLNKASKSKTVLKQ
VAPDVVFLPRDSVLLASESLNRVAGLLPYNLTLEIVMAVEAGLGELPAFSFSSSSTPACA
DPVSFLQSVCHTVIVQGVSAIISFPQNRDELVKLEFIASTLQIPVISVVQSEFQRQTQNL
LHFQMAMQNPQTSQANLIFSLLSMNNWFDVSLVMCQQMNISDFVFLLHNNSKFHLGTVLK
ISTNSSSKNDFHIFLQAQLESIKDSTSTLVTFGCDIRDIRRIFTTIAKFGLILPDYHWII
GDSQNVEELRTEGLPMGLLAHGRMGEPSLDHYVQDALELVARAVGSAATVSPQLALIPGT
TNCLARLEAKNLTSGTFLSRYMASTSFDGLSGCISVQEESTIISESHHFIWNLQHDPIGK
PMWTRLGSWKHGKVVMDYGVWPNKRRSQPGADWRHSSRLHLRVVTLVEHPFVFTRDVDDE
GLCPAGQLCLDPLTNDTALLESLFQGLQGANDTVPLEFKKCCYGYCIDLLEKLAEDMGFD
FDLYIVGDGKYGAYKNGRWTGLVGDLMSGAAHLAVTSFSINSARSQVIDFTSPFFSTSLG
ILVRTRDTAAPIGAFMWPLHWSMWLGIFVSLHVTAVFLTLYEWKSPFGMTPRGRNRDRVF
SFSSALNVCYAILFGRTAAIKPPKCWTGRFLMNLWAIFCLFCLSTYTANLAAVMVGEKTY
EQLSGIHDPKLHHPSQGFRFGTVRESSAEDYVKKSFPEMHEYMRRYNAPTTPDGIDHLKD
DPQKLDAFIMDKALLDYEVSIDADCKMLTVGKPFAIEGYGIGLKQNSPLTSNISELVSQY
KSDGFMDMLHDKWYKVVPCGKRSFAVTETLQMGIKHFSGLFVMLCVGVALSLLTTLGEHI
VHRWVIPRMQESTEHKYWLHTSQRLHRALNPTFKEDKLQTVAKPEKSCNVGNNQQMPWNS
LGTPNCNRRKLSNQEGQNDLECCHCKELLCPQEKRQLPLQATSNGRTDLLGLAQNPIVQE
LTDLETQIQLIKKQLQLAMKKKKELEQYQKTKTLTES
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgccgggctcttggatctggggtgcgctgggaaggttgatgtggctttcatttcttgcg
ccaagcgctttgataatgatcctcgttcctccggcgtctctggcgcatccacaaccatgt
cagattctgaagagaatcggacatacggtgagagtcggagctctgcatcttcagcctcga
gtattcaggcaggattccttcagtgggagagatctggactgggatgcggacagagaaatg
tgggaagagtgggatgtgatatttcaaagtgaccacgaagaagactggaggggtatcagg
actaaaagctcagtgaataacctcaacaaggcctccaaaagtaaaaccgtactcaaacaa
gtggctccggatgttgtgtttctgccacgagactctgtattactcgcttcagagagcctc
aatcgagtggcggggcttttaccttacaacctcacgctcgagattgtcatggctgtggaa
gcagggcttggagaattacctgctttctccttttcctcttcatctacacctgcctgtgcg
gatcctgtgtcgttcctgcaaagtgtttgccacactgtcattgttcaaggagtttctgcc
atcatttcgtttcctcaaaacagggacgaactggtgaagttggaatttattgcctcaacg
ctgcagattccagtcatcagcgtcgtccagagtgaattccaacgacagactcagaactta
cttcatttccagatggccatgcaaaatccccaaacctctcaagccaatctcatcttctcc
ctgctgtccatgaataactggttcgatgtcagtctggtgatgtgtcaacagatgaacata
tcagactttgttttcttgctccacaacaactccaaatttcacctgggaaccgtcctaaag
atttccaccaacagcagctccaaaaacgactttcacatattcctgcaagcccagctggag
tccatcaaggactcgacgtctaccttagtgaccttcggatgtgacatcagggatattagg
agaatcttcaccactattgcaaagtttggtttgattcttcctgattaccactggattata
ggagactctcaaaatgtggaggaattacggaccgaggggctccccatgggacttcttgca
cacgggcgtatgggcgagccttcgctggatcactatgtccaggatgctttggagctggtg
gcgcgagcggtgggatctgccgccactgtctctccacagctggcactgattcctggcacc
acaaactgcctggcaaggcttgaggctaaaaatctcacatcaggaaccttcctgtccaga
tacatggccagcacttcttttgacggcctgagcggctgcatcagtgttcaagaggaatcc
accatcatctctgaaagccatcacttcatatggaatctacaacatgacccaatagggaag
cccatgtggacccgtctaggcagctggaagcatggcaaggtggttatggattatggtgtt
tggcccaataagagacggtcccagccaggagcagactggcgccattcctcacgtctacac
ttacgagtcgtcactctagtagaacacccgtttgtcttcactcgagatgttgatgacgaa
ggtttgtgcccggctggccagttgtgccttgaccccctaacaaatgatacagccttactg
gaaagtctttttcagggtctgcagggtgccaatgacactgtcccgttggagtttaagaaa
tgctgctacggctattgtattgatctattggagaagctggcagaggacatggggtttgat
tttgacctctacattgttggagatggaaagtatggagcgtacaagaatggtcggtggaca
gggcttgtcggggatctcatgagcggagcagcacatctggctgtgacttcttttagcatc
aactcagcacgcagtcaggtgattgacttcaccagtcctttcttttccaccagtttggga
atccttgtcaggactagggatactgccgcacctattggagccttcatgtggcccctgcac
tggagtatgtggctggggatatttgtgtctttacatgtcacggctgtgttcctgacttta
tatgaatggaaaagtccattcggaatgaccccgagggggaggaacagggatcgtgtcttt
tctttctcctcagcgctaaatgtttgctacgcaatcttattcggcagaactgccgccatt
aagccacctaaatgttggaccggcagattcctcatgaacctctgggccatattctgcctg
ttctgcctgtcaacatacacagcaaatctcgcagctgtaatggttggtgagaaaacctac
gagcaactctcaggtatacatgatcccaagcttcatcatccatcacaaggtttccgcttt
ggaaccgttcgggagagcagcgctgaggactatgtgaaaaaaagcttcccagagatgcac
gaatacatgaggcgatataatgcccctacgacccctgatgggatagatcatcttaaggat
gatccccaaaagcttgatgcttttataatggacaaagctcttttagactatgaagtgtct
attgatgcagactgcaagatgctgacagtgggaaagcctttcgcaattgaaggatatggt
attgggctcaaacagaactcccctctgacttcaaatatctcagagttggtcagtcagtac
aaatctgatggatttatggacatgctgcatgataagtggtacaaggtggtgccgtgcggt
aaaagaagctttgcagtcactgagactttacagatggggataaagcacttctcagggtta
tttgtcatgctatgcgttggagtggccctgtctctcctcaccaccctgggtgaacacatc
gtccatcgctgggtgattcccagaatgcaggagtcaacagagcataagtactggctccac
accagtcaaagattacatcgagcacttaatccgacattcaaagaagacaaattgcagaca
gttgcaaaaccggagaaaagctgcaatgttggaaacaaccagcagatgccatggaactct
ttgggaacccccaattgcaacagacgaaaactgtccaatcaagaggggcaaaatgacctg
gaatgctgccattgtaaagaactgctgtgtccacaggagaagaggcagcttccattacaa
gccacatctaacggaagaaccgacttactgggtctggcccagaacccaatcgtacaggaa
ttaacagacctggaaacgcaaatccagcttatcaaaaagcaactacagcttgcaatgaag
aagaaaaaagagctggagcagtatcagaagacaaagactttaaccgagtcctag
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