Danio rerio (zebrafish): 564866
Help
Entry
564866 CDS
T01004
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
564866 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
564866 (trip12)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
564866 (trip12)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
HECT type E3
564866 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
564866
NCBI-ProteinID:
NP_001334597
ZFIN:
ZDB-GENE-041111-262
Ensembl:
ENSDARG00000061397
UniProt:
A0A8M1P4D4
LinkDB
All DBs
Position
18:41232713..41310976
Genome browser
AA seq
2053 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPIDHTLAGRNSLSLSVGSLSIPDPDLEAAGTSGQQG
RREGSSTRALKRSSVSEPNITFSPSPAKRPKVVSSHFSDSSASGPSAPAISPEVTEPRKA
PASVSTKSKKRRLAAEPAPARALSKKSSSYPGPSGASSTPSQKRKKADATLLSSSSSSSL
PSSSSAAGPLPPRSEASRAAKPTKLASKSAASAKAGCSTVTDSSSSSASSSSSSSSSSSA
ATGTNSCAPQGARLKQGKDQSKARRSRSASSPSPRRSSRDKEQSKAAGSSKFDWASRFNS
KVNLPKPKLSLPGSAKAETSSKPGPSGLQAKLASLRKSTKKRSESPPAELPSCRRSTRQK
TTGSCASTSRRGSGLGKRGAAEARRQEKMADSDNNQDGANSSAARTEETPQGASASSSVA
GAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPFGPRMSQLFHRTIGSGASSKAQQ
LLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNH
ASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKAILQA
GGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVE
STCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVLTPPVLSSGMFIMVVRMFSLMCS
NCPCLAVQLMKQNIAETLRFLLCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPR
EGIFAVDAMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISLSTLG
RVYTIDFNSMQQINEDTGTARAIQRKPNPLANPNTGGHLEVRREDARAQLMKEDPELAKC
FIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIASMLSS
QDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLAESEVFLTSPPKACTSGTAS
LCTTTITTATTTAASNVTPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPRRPK
YSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGKLGTQANSANSEPSRTAGVSGLA
RVPPKDSVSNNRDKIKAWIKEQASKFVERYFNSESVDGSNPALNVLQRLCTATEQLNLQM
DSGVECLEEISSIVSESDVSSFEIQHSGLVKQLLLYLTSNSERDTISRDERIKRFLHVFF
GCPIPGQEPPGRLDPTENGPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGNGSRGSQALK
FFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDD
DGSDDEIDESLAAQFLNSGSVRHRLQFYIGEHLLPYNMTVYQAVRQFSLQAEEERESTDD
EANPLGRAGIWTKTHTVWYKPVREDEEGCKDAVGGKRGRAQTAPTKTSPRNAKKQDELWH
EGVCPSVANPLETYLICDPPEGITFDDPSMEVILLLRVLHSISRYWFYLYDNAACKEIIP
TGEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRD
RAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRAMLEIQ
YENEVGTGLGPTQEFYALVSQELQRADLGLWRGEEVTLSNPKGSQEGTKYMFSSRGLFAV
PFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHESSISSHDLV
NIDPGVAKSIQHLEDIIRQKKRIEQDRSHTRETLQQALESLNMNGCSVEDLGLDFTLPGF
PNIELKKGGKDVPVTIHNLEDYLRLVVYWTLNEGVLRQFESFREGFESVFPLHHLQYFYP
EELDQLLCGSKSESWDVKTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLFLQFVT
GSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLL
IAAREGQQSFHLS
NT seq
6162 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacaca
gccgcggcccagccaatagaccacacacttgcaggaaggaacagcctctctctatccgtg
ggttcactctcaattccagatccagacttggaagcagcagggacttcaggccaacagggg
agacgggagggcagcagcacccgcgcactcaaacgcagctccgtttccgagcccaatatc
actttttcacctagtccagccaagcgacccaaagtggtgtccagccacttctctgacagt
tcagccagtgggccctcggcccccgcaatatcacctgaagttacagagccaaggaaggct
ccagcatctgtcagcaccaagtccaaaaagagacggttagcagccgaaccggctcctgcc
agagccctgagcaagaagagctcatcctaccctggccccagtggggcctccagcacccct
tctcaaaagcgcaagaaggcagacgccactttgttgtcgtcctcttcttcctcctccctc
cccagctcgagcagcgcggcaggccccctgccaccccgcagcgaggccagccgggcagcc
aaacccaccaagctggcgtccaaatcggccgcctcagccaaagctgggtgtagcaccgta
actgactcctcctcttcctctgcctcttcctcctcctcctcttcttcttcctcttcggcc
gccacaggcaccaatagctgtgcccctcagggcgcccggctaaagcagggcaaggaccag
agcaaagctcggcgatcacggtctgcgtcctccccttccccccgcaggagtagccgggat
aaagagcagagcaaagctgccggctcctccaagtttgactgggcatctcgcttcaactcc
aaagtcaacctgccaaagcccaaactgtccctgccgggatcggccaaggctgagacgtcc
tccaagcctgggccctccggactgcaggccaaactagcaagtttgaggaagtccactaag
aagcgtagtgagtctcccccagcagagctccccagctgtaggaggagcacacgtcagaag
accacgggctcttgcgccagcaccagtcggcgaggctcaggcctgggcaagcgcggggca
gccgaagctcgccgacaggagaaaatggccgactctgacaacaaccaggatggggccaat
tcatcggctgcgcgcacagaggagacgccacaaggggcatcagcctctagctcagtggct
ggagctgttggcatgaccacctctggagagagtgaatcggatgactctgaaatgggaaga
ctgcaagctttgctggaagcccgaggccttcctcctcacctgttcggcccctttgggccc
cgtatgtctcagctgtttcataggaccattgggagtggagcaagctcaaaggcacagcag
ctgctccagggtctgcaggctacgggagacgaatcccagcagctccaggctgctatagag
atgtgccagctgcttgtgatgggtaacgaggagacgctgggaggattccctgtcaaaagc
gttgttcctgccctgatcacactgttacagatggagcataattttgatattatgaatcat
gcatctcgcgccctcacttacatgatggaggctctgcctcgctcctcagctgtggtggta
gacgccattcctgtcttcctggaaaagcttcaggtaatacagtttatcgatgtggcagaa
caagccttgacggccctggagatgttgtcacggagacacagcaaagccatcttacaggct
ggaggtctggctgactgtttgctgtacttggagttcttcagtatcaatgctcagaggaac
gcattagccatcgctgctaactgctgccagagcatcacgccggacgagtttcacttcgta
gctgactctctgcccctgcttactcagagactcacacaccaggataaaaagtctgtggaa
agcacttgtctctgttttgctaggctggtggacaactttcagcatgaagagaacctgtta
cagcaggtggcgtcacgggaccttctgaccaacattcaacaactgctagtactcactcca
cctgtgctcagctctggcatgttcatcatggtagtgcgcatgttttctctcatgtgctcc
aactgcccatgtctggctgtgcagctcatgaagcagaatatagcagagactctgcgcttt
cttctgtgtggagcgtcgaacgggagctgtcaagagcagattgaccttgttcccagaagc
ccccaggagctttatgaactcacctcactcatctgtgagctgatgccatgtctgcccaga
gagggcatctttgcagtcgatgccatgctgaagaaaggcagcgcccagactacagaagga
gccatttggcagtggagagacgacagaggcctgtggcacccatacaaccgcatcgacagc
cgcatcattgaaactgcacaccagaatggagaagatgagatcagtctgtcgacactggga
cgcgtatacaccattgacttcaactctatgcagcagataaatgaagacactggcactgcc
cgtgccattcagagaaaacctaaccctctggccaaccccaacacaggagggcacttagag
gtgcgaagagaggatgcacgtgctcagttgatgaaagaggaccctgagctggccaagtgc
ttcatcaagactctgtttggagttctgtatgaggtgtacagctcctcagctgggcctgcc
gtcagacacaagtgccttagagccatcctccggatcatctactttgcagatgcagagctg
cttaaagacgtactgcgcaaccatgctgtgtccagccacatagcttccatgctgtccagt
caggacctgaagattgtagtgggctctctgcagatggctgagatcctcatgcaaaagcta
ccagatgtgttcagtgtttatttcagacgagaaggtgtgatgcaccaggtaaagaacttg
gctgaatctgaagtgttcctcaccagccctccgaaagcgtgcacaagtggcacagcaagt
ctttgcaccaccaccatcaccacagcaaccactacagctgcctctaacgtcacacctgac
ctgggctctccaagtttccagcacagcatggacgactcgctggacctcagtccacagggt
aggttgagtgatgttctgaaaagaaaacgcctccctaaaagaggaccaaggcgccccaag
tactcgccacccagagatgatgacaaagtggataatcaggctaaaagtccgacgaccacg
cagtctcccaagtcctcttttttggccagtttgaatcctaagacatggggtaagctggga
actcaggcaaacagtgccaactcagagccctcacgcacggcaggagtcagtggtctggca
cgagtgccacccaaggactccgtttcaaacaacagggataagataaaggcttggataaag
gagcaagccagcaagtttgtggagcgttactttaattctgagagcgtagatggaagcaac
cctgccctgaacgtcctccaaagactctgcaccgccacagaacagctcaacttgcagatg
gacagtggtgtagagtgtctagaggagattagcagtattgtatctgaatcagacgtgtcc
tcctttgagattcagcacagcgggcttgtgaagcagctgttgttgtatttgacgtcaaat
agtgaaagggacactataagtagagatgagagaatcaagaggttcctgcatgtgttcttc
ggctgcccgataccagggcaggaacctccgggacgtttggacccaacagagaatggccca
ctgcttgcattggtgcacaagatgaacaactgccttagtcagatggaacaatttcctgtt
aaagtgcatgatttccccagtggaaatggcaacggaagcaggggttcgcaggccctgaag
ttcttcaacacccatcagctgaaatgccagctgcagagacacccagactgcaccaatgtc
aagcagtggaagggcggcccggtcaaaattgacccactggccctggtgcaggccattgag
agataccttgtggttagaggatatggaaggatcagggaagaggatgaagacagtgatgat
gatggttctgatgatgagattgatgaatctttggctgcccagttcctgaattctgggagt
gtacgacacaggctgcagttctacataggggagcacctgctgccgtacaacatgactgtt
tatcaggctgtcagacagtttagtttgcaggccgaggaagagagagagagcacagatgat
gaagcgaaccctctgggacgtgctggcatctggaccaaaacacacactgtatggtataag
ccagtcagagaagatgaagagggctgtaaagacgctgtaggagggaagaggggtcgagca
cagacggcacccactaaaacctcccctcgaaatgccaagaaacaggacgaactgtggcat
gagggtgtgtgtcccagtgtggcaaacccattagagacatacctcatttgtgatcctcca
gagggcatcacttttgatgacccttcaatggaggtgattctgctgctgagggtcctgcac
tccatcagtagatactggttctacctgtacgataatgctgcatgtaaggagatcattccc
actggagagtttattaacagtaaactgacagcaaaggccaacagacagttgcaggatccg
ctggtcatcatgacaggaaacatccccacctggctcacagagctcggcaagacctgtcca
ttcttcttcccgtttgacacgcggcagatgctcttctacgtgacggcattcgaccgtgat
cgcgccatgcaacgtctgctcgacaccaaccctgagattaaccagtctgactcacaagac
agccgcgtggctccacgacttgacagaaagaagagaacgataaaccgagatgagcttctg
aagcaagcagagtcagtaatgcaggatctcgggagctctagagccatgctggaaattcaa
tatgagaacgaggttggaacaggactcggcccgacacaagagttctatgctctggtgtct
caggagttgcaaagggctgatttaggcctttggagaggagaggaagtcactctctctaac
cctaaagggagtcaggagggcaccaagtatatgttcagttccagagggttgtttgctgta
ccgtttggacgaactaccaaaccagctcacatcgccaagatcaaaatgaagttccgtttt
cttgggaagctcatggctaaagcgatcatggacttcagattgctggacttgcctctaggt
ttgccattttacaaatggatgctgaggcacgagtcctctatcagctcacatgacctggtc
aacatcgatcctggcgtcgccaaatccatccagcacctagaggacatcatccgtcagaag
aagagaatagagcaggacagatcacacacgcgggagacactgcagcaggccttggagagt
ctcaacatgaacggctgctcggtggaggatctggggctggactttactctgcctggattc
ccaaacatcgagttgaagaaaggaggcaaagatgtgccagtcaccattcacaacctggag
gattacctcagactggtggtctactggacgctcaatgagggcgtcctacggcagtttgag
tccttcagggaagggttcgagtctgtcttccctctgcaccacctgcagtacttctatcct
gaagagctggatcagttgttatgcggcagtaagtcagagtcctgggatgtgaagacacta
atggagtgctgcagaccagaccacggctacacacatgacagtcgtgcagttcggttcctg
tttgaggtgctcagcagttttgatgcggaacaacagagactgttcctgcagttcgtcacc
gggagccccagacttcctgtcggaggcttccggagtttaaaccctcccctcaccatcgtc
cggaagacgttcgagtcgacggagaacccggacgacttcctgccgtcggtgatgacgtgt
gtgaactacctgaaactgccggattactccagcatcgagatcatgcgcgagaaactgttg
atcgctgcgcgcgagggccagcagtctttccatctgtcctga
DBGET
integrated database retrieval system
