Danio rerio (zebrafish): 565198
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Entry
565198 CDS
T01004
Symbol
gtf3c5
Name
(RefSeq) general transcription factor 3C polypeptide 5
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
565198 (gtf3c5)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
565198 (gtf3c5)
TFIIIC, fungi type
565198 (gtf3c5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
TFIIF_beta
DUF4887
Motif
Other DBs
NCBI-GeneID:
565198
NCBI-ProteinID:
XP_693575
ZFIN:
ZDB-GENE-060810-66
Ensembl:
ENSDARG00000067979
UniProt:
E7EZ29
LinkDB
All DBs
Position
21:11367320..11383110
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AA seq
529 aa
AA seq
DB search
MHKRQTKMDSVITSEAVSSDTEARNTGESRDEAVVLGNTATLALSDTNLVCVEYPAVVNN
VNRMLDSIGGEQGVSKTYADSTKRIELRFRPGDPFCHPAYGNRYSSTNLLLRVRRRTRKG
NNAETQISMEIVGLIGTTYKFQGMADFQYLASHNNPEGNQVSLYDKIILRKPEKKEFYDN
PVPLFIPPPIFSRLDMPVDYFYRPDVMHNKDTAFQSALMKDHIIAPNRARRPNNAIFVNF
DDKTIPSEPLEAAVTTWRKLCVHPNDLKAEKKIKQLFEKRPIWSRNAVKANIDIHPEKMK
HLLPFVAYYALTGPWRSLWVRFGYDPRKIPGAKIYQVLDFRIRYGMKHGFGVNDMPVKSK
RSAYHYSRPTTFNRAVPLPASVTDIPQESTSSSGPVTAKYMLKESIYIFREGMLPPYRQM
FYQLCDLDVEKIQNLIHKNDGKEEVCDERDGWCVPHTADELRNIISGMIQQYVKANRPGP
STQKPVKRRAKDVGSGEEDDEDEDDDDDEEYKPSDGSDNEMETEIADYM
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcataagcgtcaaacgaaaatggattctgtgattacaagcgaggcggtctcatcagac
acagaagcgagaaatactggagaaagcagagatgaagctgttgtgttgggaaatacagca
acattagctctttctgacactaatctagtgtgtgttgaatatccagcggtggtcaacaat
gtgaacagaatgctggacagcattggaggagaacaaggagtgtctaaaacatatgcagac
tctacaaaaagaattgagctccgctttcggccgggggatccgttctgtcatcctgcttat
ggaaatcgctactcctccaccaacctgctgctcagagttcgccgcaggacacgcaaaggg
aacaatgcagagacccaaatcagcatggagatagtgggacttataggaaccacctataag
tttcaaggaatggctgactttcagtatctggcatctcacaacaacccagaaggcaaccag
gtctccctgtacgacaagatcattttgcgcaaaccagagaaaaaggaattctacgacaac
cctgtgcctcttttcattcctccccctattttctctcgtctggacatgcctgtggattac
ttctatcggcctgatgtaatgcacaacaaggacactgcatttcaatccgctctcatgaaa
gatcatattatcgccccaaatcgggctcgccggccaaacaatgccatttttgtcaacttt
gatgacaagaccataccatcagaacctctggaggctgcagtgaccacctggaggaagctc
tgtgttcatcctaacgatttaaaggcagagaagaaaatcaaacagcttttcgagaaaaga
cccatatggtctcgcaacgctgtcaaggccaacatcgacatccaccctgagaaaatgaag
cacctcctgccatttgtggcatactacgcgttaacaggcccatggaggagtttgtgggtc
aggtttggatatgatcctcgaaagataccaggagctaaaatctaccaggttttagacttc
aggatccgctatggaatgaagcatggatttggtgtcaatgacatgccagtgaaatccaag
agaagtgcttatcattacagccgcccaaccactttcaacagggcagttcctctacctgct
agtgtgacagacatcccccaggaaagtacttcatcttcaggacctgtcactgcaaagtac
atgcttaaggaatccatctacatctttcgggaaggaatgcttcctccataccgacagatg
ttctaccagttgtgtgatctggatgtagaaaaaatacagaatctcatccataagaatgat
gggaaagaggaagtgtgtgatgagagagatggctggtgtgttcctcacacggccgatgag
ctcagaaacatcatctcaggaatgatccaacaatacgtcaaagccaaccgccctggtcca
tccacacagaagcctgtgaaaagaagagccaaagatgttggcagcggagaagaggatgat
gaagatgaagatgacgatgatgatgaagagtacaagccctctgatgggagcgacaatgaa
atggaaactgagattgcagattatatgtag
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integrated database retrieval system
