Danio rerio (zebrafish): 565268
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Entry
565268 CDS
T01004
Symbol
arhgef11
Name
(RefSeq) rho guanine nucleotide exchange factor 11
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
565268 (arhgef11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
565268 (arhgef11)
Membrane trafficking [BR:
dre04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
565268 (arhgef11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
PDZ_2
RGS
Motif
Other DBs
NCBI-GeneID:
565268
NCBI-ProteinID:
NP_001027010
ZFIN:
ZDB-GENE-070604-1
UniProt:
Q49U75
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All DBs
Position
7:complement(5383517..5487007)
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AA seq
1417 aa
AA seq
DB search
MNVRHPTSTLDRLSSLTLGDSERRSSPGQQRETLPDLSSDNTGTGLVQRCVVVQRDNLGF
GFTVCGERIKLVQNVRPGGAAVKAGVQEGDRIIKVNGSMVSSMSHQEVVKMIKSGTYVAL
TLQGPPPSVASTPLQPLPSDLLSNHRTAPGEAPPLPQTPPTGSSTPTQRITGPKPLQDPE
VQKHATEILRKMLEQEEAELQNLLEEQSRNPSVSLEERIERAKRRASQVRVKIQQDVDGT
RSDAVANYLTAGEGRLSIDSSEGDVEVCESPFSSPSSFLRNPLIHRQTSDTHTSDSGKMQ
IIGPEEEEEDDGYTINEMDGPFQDIELLKSRPAHMTVFMRYVFGQLLDPNPLLFYLSVEA
YLGSSPKDARSLAPQICSHFLDHDAPLKIKVREEFLTDIENRLHAQEDIRGPLSELQQQV
LPDIQDQLQDYRNKQTMGLGSLFGESDLQQLDGDPVKEKQVVDKQIVALWEILSKHEEDR
SSPLASAVHLYLRHSGIKLRDSKVFPGLMSEKEKWLPFFPKAKKLSSAKRERDGEDKKRN
PILKYIGKPRSTSQSTFHVPLSPTEVRPGSVRNIIQQFESNSDSLEDGELEGQRLSGSFG
EDSMESPTISVRLARSESLKAQGEGRRRGGGTGAEFVPRSRSDVDMEDCEEREGPGLRPL
HHSASSSASSSSARSLENPTPPYTPRSQRRIVEVPVSLLPDAPALDEDVIDSHNWQDTVE
PHILASLTSREIDRQAVIYELFTTEVSHLRTLRVLDQVFYQKMQSVLSPEELSCIFLNLR
QVYELHASLCESMKKCRESVIVQGIGDIMLARFEGEAGDQFEEQVSHLCSQQSPALELIK
NKQRKDPRFAHLIQECEASPHCRRLQLKDLLVSEMQRLTKYPLLLDNIIKYTETSSPDLP
LLRRAQACCRGILQEVNEDVRETEHRHLLSQYQRRLDATPLERLANPVAAQFRNLDLTTK
RMVHEGPLTWRVGKDKAIEIQALLLSDLLLLLQRGPDDRLILRCPSRSLGGVTDLKTPFC
PVVCLDSCLVRPVATDNKALYVISTSERQIYELVAGTLLEKNTWKDQLEKTISAAAQGGS
TKPNTPRFRSPGAGVRLSADQSEGSESRMYPDREDEMVLSPVVTPADAAEECPDEDPDPG
QKNKAGVAESALQDVETLRQLIFRDLEDGWSQDSDDTPTNETANERSPFTDRPGNESSDP
APSESSSQWEEEPVEAPPLEVLQPAVQVVRKAVGVGCSLPDDITDDVTASQSSEDGGNLF
YLVMSTDQVVSDESTTDELKDLHHSVFSSSFINEEEEQDTPCLSPTDQSLIESQGHRPGL
SQSQSSVQRHVIKNVDEIFNTMEELMKKLQHLRDIEADHHKLLKKLRKPLPVDKMSSDGV
HKSPTAARLSSLDRGAGDGKEGVSTEPAQPQIQSTGF
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtccgacacccgacctccacgctggacaggttgagcagtctgacattaggagac
tctgagcgcaggtcttctcctggccagcagagggaaacactgcctgatctctcttcagac
aacaccggaacgggtttggtccaaagatgcgtggtcgtgcagagggacaatctgggattt
ggcttcacggtgtgcggagagagaatcaaactagtgcagaacgtccggccgggtggagca
gcggtgaaggctggagttcaggaaggagaccgaatcattaaggtcaatggctccatggtt
tcctccatgtcccatcaggaagtggtgaagatgatcaaatctgggacttatgtagcactg
acccttcaaggcccgcctccttcagtcgcatccaccccactgcagccccttccttctgac
ctcctgtccaatcacaggacagcaccgggtgaagccccacctcttccacagactccaccc
acaggaagcagcaccccaactcagaggatcacaggacccaaacctttacaggaccctgag
gtgcagaaacacgccacagaaatcctccgaaagatgctggagcaggaggaggccgagctg
cagaatcttctggaggagcagtccagaaacccctcagtttcattagaggagcggatcgaa
cgtgccaaacgaagagccagtcaggtcagagtgaagatccagcaggacgtggacggtact
cgatcagatgcagtcgctaactatctcacagcaggagaaggccgactgtccatagactcc
agtgaaggagacgtggaggtgtgtgagagccccttctcctctccatcatccttcctcagg
aaccccctgatccaccggcagacctccgacacacacacctctgattcgggaaagatgcag
atcattggaccagaggaagaagaggaggatgatgggtacacgatcaatgagatggacggg
ccatttcaggacatcgagctgctgaagagtcgtccggcacacatgacggtgttcatgaga
tacgtcttcggtcagctgctggatccaaacccactgctgttttacctgtcggtggaggcg
tatctgggttcgagcccgaaagacgcccggtcactcgccccgcagatctgctcacacttc
ctggaccatgatgctcctctgaagatcaaagtgcgtgaggagtttctgactgatatcgag
aatcgtcttcatgctcaggaggacattcgaggacctctttctgaactacagcagcaggtg
cttcccgatatccaggatcagctgcaggactacaggaataagcagacgatgggtctgggc
tctctttttggagagtctgacctgcagcagctggatggagaccctgtcaaagagaagcag
gtggtggacaaacagattgtggccctctgggaaatactctcaaaacatgaggaggacaga
agttctcctttagcatctgcagttcatctgtatctccgacattcgggaattaaactcaga
gactccaaagtgtttcccggcttgatgtccgagaaggaaaagtggcttcctttctttccc
aaagccaaaaagctgagcagcgcaaaacgagagagagatggagaggacaagaagagaaac
cccatactgaagtacatcggcaaacccaggagcacatcgcagtccacgttccatgtcccc
ctgtcccccactgaagttcgtccgggcagcgtcaggaacatcattcagcagtttgagagt
aattctgactctctggaggacggagagctggaggggcagagattgtccggcagcttcggg
gaggacagtatggagagtccgaccatatcagtgcgtttggctcgcagcgagtccttaaaa
gctcagggggaggggcgtcggcgaggaggcgggacgggggcagagtttgttcctcgttcc
cgtagtgatgtggacatggaggactgtgaggagagggaggggccaggactgaggccgtta
catcacagcgcatcatcatcagcctccagcagctccgcacggtcgttggagaacccgact
ccgccgtacacgcctcggtctcagcgcaggattgtggaagttccggtgtctctgttacct
gacgctccggctctggatgaggacgtgatcgactcgcacaactggcaggacacagtggag
ccgcacatattagcatcgctaacgtcacgagagatcgacagacaggctgtcatctacgag
ctgttcacaacagaagtttctcatctgcgaacactgagggttcttgatcaggtgttttat
cagaagatgcagagcgtcctcagtccagaagagctgtcctgtattttcctgaacctccgt
caagtctatgagctgcacgcaagtttatgtgagtccatgaagaagtgcagagaatcagtg
atagttcagggcattggagacatcatgctggccagatttgagggagaggctggagatcag
tttgaggagcaggtttcgcatctgtgcagtcaacagagtccagcgctggagctcatcaag
aacaaacagcgaaaagaccctcgattcgcccacctcatacaggagtgtgaggccagtcct
cactgccggcggctgcagctgaaggatctgctggtgtcagagatgcagcgcttgaccaaa
tatccactgctgctggacaacatcatcaaatacacagagacaagttctcctgatctgccg
ctcctccggagagctcaggcgtgctgtcgtgggattctgcaggaagtgaatgaggacgtg
agggagactgaacaccggcatttgctcagccaataccagcgcagactggacgccacgcct
ctggagagactggccaatcccgtcgcagcgcagtttaggaatctggatctcaccaccaag
aggatggtccacgaggggccgctcacgtggagagttggcaaagacaaagccattgagatc
caggcgctgctgctctcagacctgctgctcttgctccagcgggggccggacgacaggctc
atccttcgctgtccgtcacgctcgctgggcggagttacagacctcaaaacacccttctgt
cctgtggtttgcctcgactcctgcctcgtccgccccgtcgccacagacaataaagcgctg
tatgtgatcagcacatccgagaggcagatctatgagctggtggccggaacgttactggag
aaaaacacttggaaagaccagctggaaaagacaatctctgcagccgctcaaggaggatca
actaaaccaaacacaccacgtttcaggtctccaggtgcaggtgtgagattatctgccgat
cagtcagaaggctctgaatcccgcatgtatccagacagagaggatgagatggttctctct
cctgtcgtcacaccggctgatgcagctgaagagtgtccggatgaagatccagacccgggc
cagaaaaacaaagctggagtggctgaatctgctctccaggacgtggaaactctgcggcag
ctgatcttccgagacctggaggatgggtggagtcaagattcagatgacacgcccactaac
gaaacagccaatgagaggagtccgttcacagacagaccgggaaatgagtcatctgatcct
gcccccagcgaaagttctagccaatgggaggaggagcctgtggaagctccgcctctggag
gtgctgcagcctgctgttcaggtggtgaggaaagctgtgggtgtgggctgttctcttcct
gatgacatcaccgatgatgtcaccgccagccaatcgtctgaggacggaggaaacctgttc
tatctggtgatgtcgacggatcaggttgtctcagacgagagcaccacagacgagctcaaa
gatcttcatcactctgtgttttcgtcatcttttatcaatgaggaggaggagcaggacacg
ccctgtctatcgccaactgaccaatcactgatcgagagccagggtcacagaccaggcctc
agccaatcacagagcagcgtccaacgtcatgtgatcaaaaatgtggatgagatcttcaac
actatggaggagctgatgaagaaactgcagcacctgagggacattgaagcggatcaccac
aaactcctgaagaaactacgcaaaccacttcctgttgacaaaatgtctagtgatggggtc
cacaaatctccaacagcggcgcgactctcttcactggaccgcggagcaggagatggtaag
gagggcgtctcaacggaaccagctcaacctcaaatccagtccactggtttctga
DBGET
integrated database retrieval system
