Danio rerio (zebrafish): 565310
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Entry
565310 CDS
T01004
Symbol
ebf1a
Name
(RefSeq) transcription factor COE1-A isoform 1
KO
K09103
early B-cell factor
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
565310 (ebf1a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
565310 (ebf1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
565310
NCBI-ProteinID:
NP_001410899
ZFIN:
ZDB-GENE-081028-51
Ensembl:
ENSDARG00000099849
UniProt:
A0A0R4IWI1
A0AB13AA88
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All DBs
Position
14:39614037..39851371
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AA seq
593 aa
AA seq
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MFGIQDSIQRSGSSMKEEPIGAGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTSFVGFVEKEKESTGEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHGESTPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTM
LVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQR
LQKVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYNVPRGH
NQLPGLTNSSVHSGMMGVNSFHSQLAVNVSDSTQAANQGFSRNTSSVSPHGYVPSTTPQQ
SSYSTVSTSMNGYGNAGMTTLGGSPNFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSS
GIFSFSPANMVSAVKQKSAFAPVVRPQASPPPTCTSANGNGLQVIPGMIVPPM
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggattcaagacagcattcaaaggagcgggagtagtatgaaagaggagcccatc
ggtgccgggatgaacgctgtccggacatggatgcagggcgccggagtgttggatgcgaac
acagccgctcagagtggagtgggtcttgctcgagcacactttgagaagcaacctccttca
aaccttcgtaaatccaacttcttccacttcgtattagcgctatacgacagacaaggacaa
cccgtggaaattgaaagaacatcttttgttggatttgttgaaaaagaaaaggaatctacc
ggagaaaagacaaacaatgggatccattacagattgcagctcctttacagcaacggcatc
agaacagaacaggacttttatgtacgcctgattgactccatgaccaaacaggcaattatc
tatgaagggcaagacaaaaacccagagatgtgccgggtgctgctgacgcacgagatcatg
tgcagtcgctgctgtgacaagaaaagttgtgggaatcgtaatgagacgccctctgacccg
gtcattatcgacaggtttttcctgaaattcttcctcaaatgtaaccagaactgcctaaag
aatgcagggaacccacgagacatgcgacgctttcaggtggttgtgtcaacgacggtcagt
gtggatggacacgtcctggctgtgtctgataacatgtttgttcacaataactctaaacat
ggacgcagagctcgcagactggacccgtctgaaggcactccatcatacctggaacatggt
gagtctactccttgcattaaggccatcagtcccagtgaaggctggacgacagggggtgca
acagtcatcattattggtgataacttctttgatggcctacaagtcatctttggcaccatg
ctggtctggagtgagctcataacccctcatgccatccgagttcagactcccccgagacac
attcccggggttgtggaggtcactctgtcctacaagtcaaagcagttctgcaaaggtaca
ccaggccgatttatctacacagcactgaatgaacccactattgactacggtttccagcgg
ctacagaaggtgatccctagacacccgggcgaccctgagcgcttaccaaaggaggtgatt
ctgaagagggctgcagacctggtggaggctctatatgggatgccacacaataatcaggag
atcattctgaaaagagcagcagatatcgcagaggctctctacaatgtcccgcgtggacac
aaccagctgccaggtctgaccaacagctcagtccactccggcatgatgggagtcaactct
tttcacagccaactcgctgtcaatgtgtccgactccacacaagcagccaaccagggattc
agtcgaaacacgagcagtgtgtcccctcatggttacgtacccagcacaaccccccagcag
agtagctacagcactgtctctaccagtatgaatggatatggcaacgcaggcatgaccacg
ctgggaggatcaccaaacttcctcaatggctctgctgccaactctccttatgccattgtt
ccttccagtcccaccatggcctcctccactagtcttccctccaactgcagcagttcctca
ggcatcttctctttctctccggccaacatggtgtctgcagtcaaacaaaagagcgcattc
gctcccgtcgtgcggccccaggcctcaccgccaccaacctgcaccagtgccaatggaaac
ggcctccaagtgatcccagggatgattgttcctccaatgtag
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