Danio rerio (zebrafish): 565419
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Entry
565419 CDS
T01004
Symbol
kcnc1a
Name
(RefSeq) potassium voltage-gated channel subfamily C member 1a
KO
K04887
potassium voltage-gated channel Shaw-related subfamily C member 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
565419 (kcnc1a)
Ion channels [BR:
dre04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
565419 (kcnc1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
BTB_2
Ion_trans_2
BTB_3
PRRSV-NSP11_N
Motif
Other DBs
NCBI-GeneID:
565419
NCBI-ProteinID:
NP_001122197
ZFIN:
ZDB-GENE-061220-10
Ensembl:
ENSDARG00000051852
UniProt:
B3DJD2
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All DBs
Position
7:33027740..33089214
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AA seq
605 aa
AA seq
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MGQGDEKDRVVINVGGIRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDAQIDEFFFDRH
PGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHREAEEALD
SFGGGPVEMGNDDMDTEALGDPGDGDEELEMTKRLAVGDSPDTKGAGFWQRWQRRVWALF
EDPYSSKYARWVAFASLFFILVSITTFCLETHEAFNPIINRTYVNTQDNTSRFHLETETV
VYLTYIEGVCVVWFTFEFLMRVTFCPDKKKFIKNTLNIIDFVAILPFYLEVGLSGLSSSE
AKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATM
IYYAERIGANPNDPRASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCAL
AGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKNKHIPRAPQLGSANYCKSAMNSPHHS
PQISEHCALAAQEEILEMNRADPKVNGEAAKAALANEDCPHIDQAISPEDGQIFNPNEPR
GDTPCFLLNVGRRSTNTGTRVRKAGLFSGRSGAEPAGPTHGTQGYPLLQLGWAHSPEDGH
ARVTT
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgggccagggcgacgagaaagaccgtgttgtgattaacgtgggagggattcgacaccag
acctaccgcagcaccttgcgcactctgcccggcactcgtttagcctggctcgccgagcct
gatgcccacagtcactttgattatgacgcgcagatcgacgagtttttctttgaccgccac
ccgggagtttttgcacacattctcaattattacaggactggaaagttgcactgccccgct
gatgtctgtggccctctttacgaggaagagctggccttttggggcatcgatgagacagat
gtggagccctgctgctggatgacgtaccggcagcaccgggaggccgaagaggcgctggac
agtttcggtggagggccagttgaaatgggcaatgatgacatggacacggaagctttgggt
gatccaggggatggagacgaggagctggagatgaccaaacgcctggccgtcggggactca
cctgacactaaaggtgcaggcttttggcaacgctggcagcgtcgtgtttgggcgctcttt
gaagatccctattcctccaaatatgcaaggtgggtggcatttgcatcgctgttcttcatt
ctggtttccataaccacattctgcctggagacgcacgaggccttcaaccccatcattaac
cgcacatatgtgaacactcaagacaacacctcaaggtttcacctggagacagagacggtg
gtctacctaacctacattgagggagtgtgtgtggtgtggttcacctttgagttcctcatg
cgtgtcaccttctgtccagacaaaaaaaagttcatcaaaaacaccttaaacattatcgat
tttgtggccattctgccattttacctggaggtgggcctgagtgggctgtcctcttctgaa
gccaaggatgttctgggtttcctcagagtggtgcggtttgttcggatcctccgaatcttc
aagctgactcgccactttgtgggactgcgtgtattgggacacactctccgcgccagcacc
aatgagttcctcctgctcatcatctttcttgctcttggagtgctaatcttcgccaccatg
atctactacgccgaacgaatcggcgccaatcctaatgatccacgtgccagcgaacacacc
cactttaaaaacattcccattggcttctggtgggctgtcgtgaccatgaccacgttggga
tatggagacatgtatcctcagacttggtcaggtatgttagtgggcgcattgtgtgctttg
gctggtgtgttaaccatcgccatgcctgtgcccgtcatcgtcaataactttgggatgtac
tactctctagccatggctaagcagaagctaccaaagaaaaagaacaagcatattccccgt
gcccctcagctgggctcagcaaactactgtaagtctgccatgaactcgccccaccacagc
ccacaaatcagcgaacactgcgctcttgctgcccaagaggagattttagaaatgaacaga
gcagatcccaaagtgaacggtgaggcagctaaagcagctctggccaatgaggactgtccc
catatagaccaagccatttcccctgaggacggccagatctttaaccccaacgagccacgg
ggagacactccatgctttctgctcaacgttggcagacggtccacaaacactggcacccga
gtgaggaaggccggattgttctcagggaggtcaggggcggagccggccggcccgacgcat
ggcacacagggttacccactgctgcagctaggctgggcgcacagcccagaagacggccat
gccagggtcaccacctga
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