Danio rerio (zebrafish): 565473
Help
Entry
565473 CDS
T01004
Symbol
prdm11
Name
(RefSeq) PR domain-containing protein 11 isoform X2
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
565473 (prdm11)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
565473 (prdm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
Zn_ribbon_PRDM4
SET
FOG1-like_PR
DUF7822
Motif
Other DBs
NCBI-GeneID:
565473
NCBI-ProteinID:
XP_005174336
ZFIN:
ZDB-GENE-061221-1
Ensembl:
ENSDARG00000074468
UniProt:
A0A8M2BLI1
LinkDB
All DBs
Position
25:complement(8395748..8409981)
Genome browser
AA seq
937 aa
AA seq
DB search
MADSSTNPDHSSMEAEGECSTSASNEKSAEEPNKRLKVEHERYSSFWFCEECKKYYLEDC
PTHGPPVFVPDTPVASGVPNRAALTAPSGIEVRRNGDKVDVYCMDEKIPKGALFGPYKGQ
IMASDKPSGPYSWMIVDKDSKYKFIDGSDEATANWMRFIQITSDESEQNLSAFQHGDQIY
FRVCHRLKVGEKLGVWYSSEYMKRLQSVSRDSIDRNLDTDTMTPIPAALEEDDQDVDSAD
ESISADLLVAADESSKLSVGSGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQS
SRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMMTLLNAAYHL
ALEGRPFSDLRPLAELLKKCDLKVVDQYMNENDCQILIQHISRAFKEDLAEKIRLSPFLS
IIMDGQNDDLLADMVAVYVQFTTTDGLPATEFLSLQRLCGGNVEGYLQAVDRAFGVLGLR
LQDMLVVGLGIDGSNISSSLRANLYVAIRKTIPWVLCLPVMIHRPHLEVLDAISGKELSC
LEDLENNLKQLLSFYRYSPRLMAELRSSAPTLSEETEFLGDIRAVRWIIGEPNVLNALIK
DYLEVVAHLKTISNQTQRGDAAAIALSLLQFLLDYQSVKLIYFLLDVIAVFSRLAFIFQG
DYLLVSQVDAKIEDAIHEIGQLVDSPGEYLQEFEDNFRESFNGVDLKNLRVAESKFQSIR
EKICQQSQCILAQRFEPRSRTVVQACQVLDLASWPINRDDLSAYGEEEILVIFDHLETIP
SSGRERSIERTDARGSLVVEWRDLKADYCSVNGFKEVVSHIFRYKQRYPLLNHILQIVRV
LPTSTTCCDKGRGSLQKVRRNSRSRLTLDQINDLLTLAVNGPPIGSFDGKRALDSWFEEK
SGNSISLSTEVLSRMSTTEQKSVLHNMDMNAEYYPDV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcagattcttccaccaatccagatcattcctccatggaagctgaaggcgaatgcagc
accagtgcatcaaatgagaagtcagctgaagagccaaacaaaaggctaaaagtagaacat
gagcgttattccagtttttggttctgcgaagagtgcaagaagtattacctggaggattgt
cctacccatgggccgcctgtctttgtgccagacacccctgtggcatcaggggtgcccaat
cgggcagctctcaccgcaccctcaggcatcgaagtgcgcagaaatggcgataaggtggat
gtctactgcatggatgaaaaaataccaaagggggcactgtttggtccttataaaggccaa
ataatggcctcagataaaccttcagggccgtactcttggatgattgttgataaggacagc
aaatataaattcatcgatgggagtgacgaagctacagctaactggatgaggtttatccag
attacttctgatgagagtgaacagaacctgagtgcgtttcaacatggtgatcaaatctac
tttcgagtgtgtcacagactgaaggtgggcgagaaacttggtgtttggtacagcagcgag
tatatgaagcgactgcagagtgtgtcccgggacagcattgaccgcaatctggacacagac
accatgacgcccatcccagcggcccttgaggaggatgaccaggacgttgattctgccgat
gaatccatttctgctgacctcctggtggctgcagatgagtcttcaaaactctcggtgggt
tcgggtcgtcggattcgcagattcaaacaggagtggctgaagaagttctggtttctccgt
tattcacctacactgaatgagatgtggtgccacgtgtgccgccaatacaccgtccagtcc
tcccgcacctctgcgtttatcatcggctccaagcaatttaaaatccacaccattaaactg
cacagccagagcaatctgcacaagaagtgccttcagctttacaaacttcgaatgcacccg
gagaaaactgaagagatgtgtcgtaacatgatgactcttctgaatgctgcctatcatctg
gctcttgaaggacggccgttttctgatctgcgccccttagcggagctactcaagaagtgc
gacctcaaagtggtggatcaatacatgaacgaaaatgactgtcagattctcatccaacac
atttctcgagcatttaaagaagatttggctgagaagatccgcctttcaccctttttaagc
atcatcatggatgggcagaatgatgatctcttggctgatatggttgccgtatatgtccag
ttcaccaccactgacgggcttcctgccactgagttcctctccttacagaggctttgtgga
ggtaatgtcgaaggttaccttcaggctgtggatcgtgcctttggagtccttgggctaaga
ctccaggacatgctagtcgttggtttgggaatagatggttcaaacatttcctctagttta
agagctaatctttacgtagccatccgaaagacaattccatgggtgttgtgtttacctgtg
atgatccatcgcccacatttagaggttctggatgccattagtgggaaggaactgtcctgc
ttggaggatttggagaacaacttgaagcaactgcttagcttctatagatattccccacgt
ttgatggctgagctaaggtcatcagcaccaacgctgtcggaggaaactgagtttcttggt
gatattcgagctgtccgttggatcataggggaacccaatgttctcaatgccctaattaag
gactatctggaggtggttgctcatctgaagaccataagcaaccaaacacaaaggggtgat
gctgctgccattgctctgtctctcctacagttccttttggactatcagtcagtgaagctg
atttattttctcctggatgtcattgctgtcttttcacggcttgctttcatctttcagggt
gactatctgctggtgtcacaagtggacgcaaaaattgaagatgccattcatgagattggt
cagctggtggactccccaggggagtacctgcaagaatttgaggacaactttcgggagagt
tttaatggtgtggacctcaagaacttgagggttgccgagtccaagtttcagtcaattcga
gagaaaatctgccagcaaagtcaatgcattctggctcagcgctttgaaccacgcagccgc
acagttgtccaggcctgtcaggtccttgacctagcctcatggcctattaacagggatgat
ctcagtgcatatggagaggaagagatccttgttatttttgaccacctggagactattcct
tcatccggccgtgaacgctcaatcgaaagaacagatgccagaggaagtctcgtggttgaa
tggagggatctgaaagctgattattgtagtgtgaatggttttaaagaagtcgtcagccac
atcttcagatacaagcaacgttatcctcttctcaatcacattctgcagattgtcagagtc
ttgccaacatctacgacatgctgtgacaaaggaagaggctcgttgcagaaagtgcgcaga
aatagccgttccagactgactctggatcagatcaacgatttgctcaccttggctgtcaat
ggaccgcctattgggagctttgatggaaagcgggcattggacagctggtttgaagagaaa
tctgggaacagcatttcactgtcgacagaggtgctgagcagaatgtccaccaccgaacaa
aaatctgtgttgcacaatatggatatgaatgcagagtattatcctgatgtttga
DBGET
integrated database retrieval system
