Danio rerio (zebrafish): 565756
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Entry
565756 CDS
T01004
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X2
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
dre04210
Apoptosis
dre04218
Cellular senescence
dre04620
Toll-like receptor signaling pathway
dre04621
NOD-like receptor signaling pathway
dre04622
RIG-I-like receptor signaling pathway
dre04623
Cytosolic DNA-sensing pathway
dre04625
C-type lectin receptor signaling pathway
dre04920
Adipocytokine signaling pathway
dre05132
Salmonella infection
dre05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
565756 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
565756 (nfkb1)
04218 Cellular senescence
565756 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
565756 (nfkb1)
04621 NOD-like receptor signaling pathway
565756 (nfkb1)
04622 RIG-I-like receptor signaling pathway
565756 (nfkb1)
04623 Cytosolic DNA-sensing pathway
565756 (nfkb1)
04625 C-type lectin receptor signaling pathway
565756 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
565756 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
565756 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
565756 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
565756 (nfkb1)
Transcription factors [BR:
dre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
565756 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ist1
Motif
Other DBs
NCBI-GeneID:
565756
NCBI-ProteinID:
XP_021336944
ZFIN:
ZDB-GENE-121204-3
Ensembl:
ENSDARG00000105261
UniProt:
A0A8M9QGX8
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All DBs
Position
14:complement(49811942..49859739)
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AA seq
539 aa
AA seq
DB search
MNSCGIMAGEDPYVTYLDSNDPFQDTIWMNTMDPTTFPAIHNNNIMRTVDGPCLQITEQP
KQRGFRFRYGCEGPSHGGLPGASSEKNRKSYPQVQICNYQGPARVVVQLVTNSQHPHLHA
HSLVGKQCDKGICISDMQPKDSSISFPNLGILHVTKKNVSKVLEERMMEAYRMGYNYGIF
IHPEIDALQGEVRMPRELNEAERSLISSAASQQAKEMDLSVVRLMFTAFLPDSDGGFSRR
LEPVISEPIYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDDS
GWEAYGDFSPTDVHRQFAIVFKTPKYRDLNLQKPISVFVQLKRKSDNETSEPKPFTYHPQ
IIDKEEVQRKRQKTLPNFQDYSGAGGGAGGMFRGGGGGSTAGGGPSGGGGGGGGHFFHGY
QNFNNFGSGYSFSSAMGGGGTNIKHAHQEPVEDSEGEDDDDDDDDPAAGGVVQLSDHPGF
TGVKAEDLHASGSVLAPHLAELASRQAEALFHYAVTGDARLLLAPQRPLMTTQDEDGDT
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaactcttgtggaatcatggctggcgaggacccatacgtcacgtatttggacagcaat
gacccgtttcaagacaccatatggatgaacaccatggaccccacaacctttccagccatc
cacaacaataacatcatgagaacagttgatgggccttgcttacaaatcacagaacaacca
aaacagaggggcttcaggttccgctatgggtgtgagggcccgtctcacggagggcttcca
ggggcctccagcgagaagaaccgcaagtcctacccacaagtgcagatctgtaattatcag
ggccctgctcgtgtggtggtccagctggtgaccaactctcagcatccgcatcttcacgct
cacagtctggtgggaaaacagtgtgataaaggcatctgcatctccgacatgcagcccaaa
gactccagcatcagtttccctaatttgggcatcctgcacgtgaccaagaagaacgtgagt
aaagtgttggaggagcgcatgatggaggcctacaggatgggttacaattacggcatcttc
atccacccggaaatcgacgccttgcagggagaagtgcgcatgcccagagaactcaacgag
gctgagaggagtctgatcagcagtgcagcgtctcagcaggcgaaggagatggacctcagt
gtggttcggctgatgttcactgcgttcctgcctgacagtgatggaggattctcacgcaga
ctggagcccgtcatctcagagcccatatatgacagcaaagctccaaacgcctccaatctg
aagatcgtgcggatggacagaaccgccggctgcgtgaccggaggagaagaggtttatctg
ctctgcgacaaagtccagaaagatgacattcaggtgcgcttttatgaagatgacgattca
ggctgggaggcgtatggggatttctctcccacagatgtgcacagacagtttgccatcgtc
ttcaagactcctaaatatcgagacctgaacctccagaagcccatctctgtgttcgtgcag
ctgaagaggaaatccgacaacgagacgagcgaaccaaagcccttcacctaccatccacag
atcatcgataaagaagaagtgcagaggaagagacagaagaccctgcctaacttccaggac
tacagcggagcaggaggcggagccgggggcatgtttagaggaggagggggcgggtctaca
gcagggggcgggcccagcggaggaggaggaggaggcggagggcatttctttcatgggtat
caaaactttaataattttgggagtggatacagcttctcctcggccatgggaggaggcggg
accaacatcaagcatgcacaccaagagccggttgaagacagcgaaggtgaagatgatgat
gatgatgatgatgatcccgcagcaggaggtgttgtgcagctctcagatcatccgggattt
actggagtaaaagcagaagatctgcacgcctcaggaagtgtgttagcgcctcatttagct
gaactagcgagtcgacaggctgaagcgctctttcattacgcagtaacgggtgacgctcga
ctgctgctggctccacagcgccccctcatgaccactcaggatgaggacggagacacgtaa
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