Danio rerio (zebrafish): 565841
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Entry
565841 CDS
T01004
Symbol
atxn1b
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
565841 (atxn1b)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
565841
NCBI-ProteinID:
XP_068070234
ZFIN:
ZDB-GENE-061218-2
Ensembl:
ENSDARG00000060862
UniProt:
E7F6Z5
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All DBs
Position
16:complement(26853090..26888069)
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AA seq
827 aa
AA seq
DB search
MKSNQERCNECLPPKKREILALEEKQVLVSAAVSESQSGENLAWLASVATMASMAHIPNN
AGPSHSNSSEPDSPPPSNKALTVVAEYPPTTTSAGFSFSSNSSTYRGVLSGPTVLTASPA
VLSTSLPQTIGSVQYTQLPPNLQLIGPYTSYISSHIVPSTSSPTQPQRTPQEILATTAVI
SQASSLDSQSHVISSIPNVSHSQCIQVESAPLGLTVSSPSTQLPLQIHPHSAVLAPHALA
LTPSQVVLHYTDGFIAKQPDSHRREVLNGALGDVTVVKHNTTMAKGISSQPDVEQNHKQN
HNLGIQTQAQVLLPADYTTNDRAGLQTSLMLVSSSHLAANSNSDIQSILGKDHSSLHLAE
RGGICLGKPMSRVSSLTSSDSQVSPASTISPHTLIQAPHNAPQQELSTSLYSATQLPIIG
YITSASGGPQQAVTGYQSNLPQHVVISGNPSLLIPVSATNINPSTAEPEVTRCSVIPSLA
NASTALPQTFINTSPPAAVASVLPNGKDITGSDGGLVPCAVPSPTQIQLPVLSGSVVRSP
VPATPPISTSPHSSPSSPTAGLPPFFMKGSIIQLADGELKRVEDLRTEDFVQSAEVSGEL
KIDSSTVERIEGSGTPNAVIIQFSVGENKAQVCVEVLVEYPFFVFGQGWSSCCPDRTTQL
LALSCAKLSVGDVCISLTLKSLKNSIQKKDHFSDSVMKHSLLNATKNNGPLMERPTQVDD
LKKGHKIPSEVENSIVEKLIETSNTKIVLSLSENGGSNPQTLVNLQNQAEKTYTSTAERP
ISRKRRWSAPEKADMQKSREDPQILPKFSFIPHQLKVSIEGRSSTGC
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctaaccaggagcgctgtaatgagtgccttccgccaaagaagcgggagatttta
gcactggaagagaagcaggtgctggtgtcagctgctgttagtgagagccagagtggagaa
aatttggcttggctagccagtgttgctaccatggctagcatggcccacatccccaacaat
gcaggcccatcacatagcaacagttctgagcctgacagccccccaccatcaaataaggct
ctcactgtggtggcagagtaccctccaactactacatctgctggcttttcattctcttcc
aatagttccacctacagaggagtcttgtcggggcctaccgtactaacagcaagtcctgcg
gttctctccacaagccttcctcaaaccataggttccgtccaatacacacaacttcccccc
aatctccagctcatagggccctatacaagttatatctcttcacatattgtcccatccaca
tccagtccaacacaaccacagagaacaccacaagagatcttggccacaacagctgtcatc
tctcaagcatccagccttgattcacagagtcatgtgatttcttctataccaaatgtttcc
cacagtcaatgcatccaggtcgagagtgctcctttgggtttgacagtttcttctccttct
acacaactgccccttcaaatccatccacactcagctgtccttgctcctcatgccctggct
ctcaccccctctcaagtggtactacactacaccgatggcttcattgcaaagcagccagac
tcccatcgcagagaggtgctgaatggtgcactaggggatgttacagtagtcaagcacaat
actacaatggccaaagggatctctagccagccagatgttgaacagaaccacaagcaaaac
cataacctgggtatccagacgcaagctcaggttctgctgcctgcagactacaccactaat
gacagagcaggtctgcagacttcgctgatgctggtatccagtagccaccttgcagcaaac
agcaactcggacatccaaagtatcttgggtaaagaccactcatctttgcaccttgctgag
agaggagggatctgcctaggcaagccaatgtccagagtgtcctcccttacttcttcagac
agccaagtttctcctgcctcaacaatttccccccacacactcatccaggctcctcacaat
gctcctcaacaggaactctccaccagcctttactctgctacacagctcccaattattggc
tacatcaccagtgcttctggtggacctcagcaagcagtaactggttatcagagcaacctg
ccacagcatgtggtaatctcaggcaacccctccttgctcattccggtgagtgccactaac
atcaatccgtctactgctgagccggaggtcacacgctgttctgtcatccccagtttagct
aatgcatcaacagctctgccccagacctttattaatacatccccacctgcagcagtagct
tcagttctacccaatggtaaagacatcacagggtctgatggaggtcttgtcccctgtgct
gtgccaagtcctacccaaatacagctgcctgttctttcaggcagtgtagtgagatctcca
gtcccagctacacctccaatttccacaagccctcacagctcaccatcatcaccaacagca
ggacttcctccattcttcatgaagggctctattatccagttggcagatggcgaattgaag
cgtgtggaggatctgcggacagaggactttgtgcaaagtgctgaggttagtggagaactg
aagattgactccagcactgtagagcgcatagagggcagcggcactcctaatgctgtcatc
atacagttctcagtgggagagaacaaagcccaggtgtgtgttgaggttctggtggaatac
cctttctttgtgtttggtcaaggttggtcatcctgctgccctgatcgcaccacccagtta
ctagcgctatcctgtgccaaactctctgtgggcgatgtctgtatctctctcactcttaaa
agtctaaaaaatagcattcaaaagaaggatcatttttcagactctgtgatgaaacacagc
cttttaaatgcaaccaaaaacaatgggcctcttatggaaagaccaacccaagtggatgat
ctcaagaaaggacacaaaattccatcagaagtggaaaatagtattgtagaaaaacttatt
gagacttccaacacaaaaattgtgttgtccctttctgagaatgggggctcaaatcctcag
acactagttaatcttcagaaccaagctgaaaaaacatatacatccactgcagagagaccc
attagtcgcaagaggagatggtctgccccagagaaagcagacatgcagaagtcgcgagag
gaccctcagattttacccaaattttccttcatcccacatcagctgaaggtcagcattgaa
ggccgttccagcacaggttgttga
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