Danio rerio (zebrafish): 565862
Help
Entry
565862 CDS
T01004
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00310
Lysine degradation
dre00514
Other types of O-glycan biosynthesis
dre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
565862 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
565862 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dre01003
]
565862 (colgalt1a)
Enzymes [BR:
dre01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
565862 (colgalt1a)
Glycosyltransferases [BR:
dre01003
]
O-Glycan biosynthesis
O-linked Gal type
565862 (colgalt1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
CAP59_mtransfer
Motif
Other DBs
NCBI-GeneID:
565862
NCBI-ProteinID:
XP_694217
ZFIN:
ZDB-GENE-070720-6
Ensembl:
ENSDARG00000073974
UniProt:
X1WCE6
LinkDB
All DBs
Position
3:52702757..52734933
Genome browser
AA seq
618 aa
AA seq
DB search
MLVTSLCFAMRCFVLFVSVLCSCLINSGPAQGYFHEERWSPESAILAPRVMIALICRNNQ
HSLPHFLGTIERLNYPKDRIALWVATDHNVDNTTYLLRDWLINVQKLYHYVEWRPKEQPS
QYNDEEGPKDWTNERYAYVMKLRQAALESAREMWADYLMMIDCDNLLINQDVLWKLIKEN
KTIVAPMMESRAAYSNFWCGMTSQGYYKRTPAYIPIRKQVRKGCFAVPMVHSTFLVDLRK
EASRQLAFHPPHPDYTWAFDDIIVFAFSARIAEVQMFICNREIYGHLPVPLRAHSTLQDE
ADSFIHTMLEVNVRNPPVEPSRYLPKPVRKPDKMGFDEVFIINLKRRGDRRERMLRALTE
QEIECKIIAAVDGKAMNVSEIHALGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIV
DRGLKTSLILEDDLRFEIFFKRRLQNLLLELQSQSLDWDLIYIGRKRMQVDRPEKAVPNI
RNLVEADYSYWTLGYMMSLQGARKLLKAQPLSKMLPVDEFLPVMFNKHPVSDYMEQFETR
DLKAFSAEPLLVFPTHYTGEAGYISDTETSTVWDNEKVHTDWDRERRGKTQEQGEISTEA
QNSDVLQSPLDRTARDEL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtaactagtttgtgcttcgcaatgcggtgtttcgtgctgtttgtgtcggttttg
tgctcctgtttgataaacagcggaccagctcaaggatacttccatgaggagcgctggagc
ccggagtctgcaatactcgccccgcgggtaatgattgcactcatctgccggaacaaccag
cactcgctgccgcatttcctcgggaccatcgagcgcctcaattacccgaaagaccgcatc
gcgctgtgggtagcgactgaccacaatgtagacaacaccacatacctgctgcgagactgg
ctcatcaacgtacagaaactctaccattatgtggagtggaggccgaaggagcaaccaagt
cagtataatgatgaggaaggaccaaaggattggacaaatgagcgttatgcttacgtcatg
aaacttcgacaggcagcgctggagtctgcacgagaaatgtgggccgactatcttatgatg
attgattgtgataatctcctgatcaaccaagatgtcttatggaagctaataaaggagaac
aagacaattgtggcaccaatgatggagtctcgtgctgcctactcaaacttctggtgcgga
atgacctcacagggctactataaacgaactcctgcctacattcccatccgcaagcaagtt
cgtaagggatgctttgcggttccaatggtgcattcaacgttcctggtggacctgcggaaa
gaagcttccagacagttggcttttcatccgccgcatccagactacacctgggcttttgac
gacattatagtcttcgccttctcagcccgaatagcagaagtccaaatgtttatttgcaac
agagaaatatatgggcacctcccagttcctcttcgtgcccacagcactctacaggatgag
gcagacagcttcattcacactatgctggaggtcaacgtacgaaatcctccagttgagcct
tcaagatacttacccaaacctgtcagaaaacctgataaaatgggctttgatgaggtgttt
ataatcaacctgaagcgacgaggtgacaggcgtgagcgcatgctgagggcattgacagag
caagagattgaatgtaagattatcgctgctgttgatggcaaagctatgaacgtcagtgag
atccatgctttaggaatacacatgctgcctggctacagtgacccttatcacggcagacct
ctcactaaaggagagctgggctgcttcctgtcccactataacatctggaaagagattgta
gatcgaggattgaagacctcgctaattcttgaagatgacttaagatttgagattttcttc
aagcgtcgcctgcagaatctgttgcttgagctccaaagtcagagtctggactgggacctc
atttatattgggaggaagaggatgcaagtggaccggcctgaaaaagcagtaccaaatatt
cgcaacctagtagaggcagactattcctactggaccttaggttacatgatgtccttacaa
ggagccagaaagcttctcaaagcccaaccacttagtaaaatgttgcctgtcgatgaattc
cttcctgttatgttcaataagcatcctgtatcggattacatggagcagtttgagacgagg
gacctgaaagcgttttcagcagagcccttgctggtgttccccacacactacacgggtgag
gctggctacatcagtgacacagaaacctctacggtatgggacaatgagaaagtacacacg
gactgggacagggagcgtcggggtaagacccaggaacagggtgagatcagcacagaggcc
cagaactcagatgtgcttcagtctcccctggacaggacagcccgagatgaactatga
DBGET
integrated database retrieval system
