Danio rerio (zebrafish): 566001
Help
Entry
566001 CDS
T01004
Symbol
ptx3b
Name
(RefSeq) pentraxin-related protein PTX3 isoform X2
KO
K25724
pentraxin-related protein PTX3
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
566001 (ptx3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pentaxin
Laminin_G_3
PTX3_N
Syntaxin
Polysacc_lyase
GlutR_dimer
CorA
Plectin_PPL
PMI_typeI_hel
Motif
Other DBs
NCBI-GeneID:
566001
NCBI-ProteinID:
XP_068070408
ZFIN:
ZDB-GENE-081104-385
Ensembl:
ENSDARG00000079515
UniProt:
A0AB32T5Q7
LinkDB
All DBs
Position
2:39665011..39676954
Genome browser
AA seq
366 aa
AA seq
DB search
MLEDSQMKQNMLHWQTEDMVKKEMDSIRKDLHKLNNNKACVQASENTCKCISEQMNRNIK
QVMEQLREAADSHQAQNNETLQQLIQLSRHQASRLAKLELGAGLGQVAVKSFSVYPKEQE
ASSADGGKLERALMAATADLQRVHAQLALFQRATVNRYLPSGCEMALLFPMRSKHIFAEV
TPSMSMSLQTFTLCLWAKVTQALNKTVLFSYGSKINPQELQLLLSGRSLLLKVGGDTGLV
EALGVVTDGQWGHFCATWSSKQGLADLWVNGESVARVSGVAEGHELPSDGFILLGQEISR
SGIYRDLVSTVVFTGKMTGVNMWDHVLEAERIKEYANQDGSCDSRGNVIGWGISEIVPNG
GAQYIN
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgctggaagactctcagatgaagcaaaacatgctccattggcagactgaagacatggtc
aagaaagagatggactctatacggaaggatctccataagcttaacaataacaaagcatgt
gtccaggcttcagaaaacacttgcaagtgcataagcgaacagatgaaccgcaatataaag
caagttatggagcagctcagagaggctgcagattctcatcaagcccaaaacaatgagacg
ctgcagcagctcattcagctgagccgacatcaggcttcccgtctcgccaaactggagtta
ggagcaggactagggcaggtggccgtgaagtctttttctgtttatccaaaagaacaagaa
gcaagcagtgcagatggtgggaagttggagagagcactaatggccgccactgctgatctc
caaagggtgcatgcccaactggcccttttccagagagcaaccgtaaaccgctatctgccc
tcagggtgtgagatggctttgttatttccaatgcgctccaagcacatcttcgcagaagta
acaccctccatgtccatgtctctacaaacattcactctctgtctgtgggccaaagtgact
caggctcttaataaaacagttcttttctcatacggaagcaagataaaccctcaagagctc
cagcttcttctgtcaggtcgctcactactcctcaaggtgggcggtgacactggtctagtg
gaagctcttggtgtagtaacagatgggcagtggggacacttttgcgccacttggagctca
aagcagggtttggctgatttgtgggtgaatggagaaagtgttgccagagtgtctggagta
gcagaaggccacgaactgcccagtgatgggttcattttgcttggacaggagatcagccgg
tcgggaatttacagagatctggtctcaactgtagtcttcaccgggaagatgacaggggtg
aacatgtgggaccacgtgctggaggcggagaggattaaagagtacgccaatcaggacggg
tcatgtgatagcagagggaatgtgattggatggggcatttcagagatcgttccaaatggt
ggagctcaatatatcaactga
DBGET
integrated database retrieval system
