Danio rerio (zebrafish): 566023
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Entry
566023 CDS
T01004
Symbol
lrrc7
Name
(RefSeq) leucine-rich repeat-containing protein 7 isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dre04990
]
566023 (lrrc7)
Domain-containing proteins not elsewhere classified [BR:
dre04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
566023 (lrrc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_1
LRR_LRWD1
PDZ_6
PDZ_2
LRR_NXF1-5
LRR_5
LRR_EndoS
LRR_Zer-1
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
566023
NCBI-ProteinID:
XP_005166019
ZFIN:
ZDB-GENE-130530-876
Ensembl:
ENSDARG00000079670
UniProt:
A0A8M2BDH3
LinkDB
All DBs
Position
6:complement(32633053..32879875)
Genome browser
AA seq
1556 aa
AA seq
DB search
MDNYSTLQLQCLEMTTKRKIIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEF
PDNIKCCKCLSVVEASVNPIAKLPEGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILE
LRENHLKTMPKSIHRLSQLERLDLGSNEFSELPEVLEQIHSLKELWLDNNSLQTIPGSIG
KLRQLRYLDLAKNRIESLDADISGCESLEDLLLSANMLQQLPDSIGKLKKLTTLKVDDNQ
LTSLPNTIGSAHGKFGLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLSDLPREI
GNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDN
QSKALIPLQTEAHPETKQRVLTNYMFPQQPRHDEDYQSDTDSFNPTLWEEQRQQRMTVAF
EFEDKKEEEDNSGKVKVEINLKRYPTPYPEDLKNMVKSVQNLVGKTTHPLNTEKCSSGTN
MELHSQDKYEPKWPIAPKEVTERDVKDYSNQPMSDQGVILNSAIDIPKRKEDLTESSEIS
LHRVVPKPQQPENTSLAVSSSSCFCLIDSMGGSPNDIRISDMRPTLVEPPMYKPKVVLLG
KEKKESTDESEPDKMHCLNNSGSSATYSDYSPSQGSSGSSNPPGNVGNLQTSGKEGSSQT
HWTNRLAQSFPKPIETKPLLSQRETPPSSTLQQRGERRPLSDTFDSWNDAPHYDNTGFVA
EEMPLDTPSSSAGNPMLGSKPRSASTAHGRRPLMRQDRIVGVPLELDQTQQTFHTVRNTP
DTEVPAPSNPWQNWTRTPSPFEDRTAFPSKLEITPANSPNPDRKDFEQEMGEIPGTFPST
GAWGFLDSTDSGTGRGHPNVYTHIQVGKEPNKGNTMVLSKSSERLSPMMKEVKAKFKKSQ
SIDEIDTGSYKVYSIPMDSYSSSIENQGSVDRADFPIPLEQSMSRSQSAPMLDDDLDGYG
LNKSSQQQKPAIPKKVYHFDQSFNPQGAMDVLKAERRVPPPFPNTPEYVNQPGKTLPKEL
VSPRGYRGYPQMEQVFSFAPNATDDSHNQQLSVQPQRSRPGFLRRADSLVSSTEMALFRR
VAENHELQLAEHYSRPQQIKSMLEQQNSLSTMADTQFHKRNGRYDEDYSSYQEPKKPIMG
YPTKSLTQRRPLSARSYSTETYGASQARPVSARPTMAALLEKLPSDYNLSTCTEKSPEAD
MNLRPVPQKQEDLTSKMPVDWRQQLLRHIEAKRLDRSAVLKHNTVNFGMLYSGGYAAPHA
SRSMTINFYNNTKHENQTTQWLPLPNTPSQQSNILDNGQEVMSPSSQWAPYSLGRRDVPP
ENMNIIKKPGVHNPHQQQTMMITSAPPPHRTARDQQYEGAINKVSIQQYQSPLPMPITTT
SPRPQSARCFIQTKGQKSMDGFPEQLCVRIEKNPGLGFSISGGISGQGNPFKPSDMGIFV
TRVQPDGPASNVLRPGDKILKANGHSFLHMEHETAVSLLKNFPKTVDLVILRESTI
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atggacaattactcaacgcttcagttgcagtgtctggagatgacgactaagaggaagatc
atcggccgcctggtgccctgtcgatgtttccggggggaggaggaggtcatctcagttctg
gattattcccactgtagcctgcagcaggtccccaaggagatcttcagcttcgagcgcacg
ctggaggagctttacctggacgccaaccagattgaggagctgcctaagcaactcttcaac
tgtcaagcgctcaagaagctgagcatgcctgacaatgacctctccaacctgccaaccacc
attgccagccttgtgaatctgaaagagttagatattagtaaaaatggtattcaagagttt
ccagacaacatcaaatgctgtaaatgtctatcagttgtggaggccagtgtaaatcctata
gccaagctcccggaaggcttcacccagcttctaaacctgacacagctcttcttaaatgat
gccttccttgaatacctgcctgccaattttgggagattgtcaaaattacggatcttggaa
cttcgtgagaatcacctgaaaactatgccaaagtcaattcataggctgtcgcaactggag
cggttagacttgggaagcaatgaattctctgaactgccagaagtgctggagcagatccat
agtctaaaagagctgtggctggacaacaattcattacaaactataccagggtctattggg
aaactgaggcagctgcggtatctagacttggcgaagaacaggattgagagtctagatgca
gatatctctggctgcgagtccttagaggaccttctcctctccgccaacatgctgcaacag
ttacctgattcaataggaaagttgaaaaagttgacaacattaaaagttgatgacaaccag
ctcacctcactgcctaacaccattggaagtgcacatggcaaattcggtttatcactttta
gaggagtttgactgtagctgcaatgaactggaatctctgcctcccaccattggctacttg
cacagtcttcggacatttgcagccgatgagaacttcttgtctgatctgcccagagagatt
ggaaactgcaggaatgtcacggtcatgtccttgcgctccaataaactggagtttctgcct
gatgaaattggacagatgacaaagctacgtgttctcaatctaagtgacaataggttaaag
aatcttcccttcactttcactaaattgaaagatcttgctgcactctggttatctgacaat
cagtccaaggcccttatcccccttcaaacagaggctcatcctgagaccaaacagagagtc
ttgaccaactacatgttccctcagcagcccaggcatgatgaggattaccagtctgacact
gacagctttaatcccactctctgggaggagcagagacaacaaaggatgacggtggcgttt
gagttcgaggacaagaaggaggaagaggacaactcaggaaaagtgaaggttgagattaat
ttaaagcgttatcccaccccgtacccagaagacctcaagaacatggtaaagtcagtgcag
aacctggtgggtaaaaccactcaccccctaaacactgaaaaatgctcttctgggaccaat
atggagctccacagccaagacaagtatgagcccaagtggcccattgctccaaaggaggtg
acagagcgagacgtcaaagactattcaaaccaaccgatgtctgatcaaggtgtcatcctc
aactcagccattgacatcccaaaacgcaaagaggatctgactgaaagctcggaaatttct
ttacatcgcgtcgttcccaagcctcaacagccagagaatacgagcctggccgtttcttcc
tcttcctgtttctgcctcatagactccatgggaggctccccaaatgatatccgaatctct
gacatgagaccaactttggtagagccaccaatgtacaaaccaaaagttgtgttactgggc
aaggaaaagaaagagtcaacagatgagtctgaaccagacaaaatgcattgtttgaacaac
agcggatcatctgccacttattcagactactcaccctcccagggatcatctggctcctcc
aacccacctggaaatgtcggtaatctgcaaacatctgggaaagaggggtcatcacagact
cactggaccaacaggctggctcagtctttcccaaagcccattgaaaccaagcctcttctg
agccagagggaaacacctccttccagcacgctgcagcagcgaggtgagaggcggccactc
agcgacaccttcgacagctggaacgatgccccccactatgataacacaggttttgttgcc
gaggagatgcctcttgacactccgagcagcagtgctggaaaccccatgctaggctcaaag
ccccggagtgcatcgacagcacatgggcgacggcctctcatgagacaagaccgcatcgtt
ggagttcccctagagctcgatcagacacaacaaactttccacacagttcgcaacacccct
gacactgaagtgcctgctccttcaaacccctggcaaaactggacaaggactcccagtcct
tttgaggacaggacagctttcccttccaagttggaaattaccccagccaacagccctaat
cctgaccgtaaggactttgagcaggagatgggagaaatacccggcactttcccctcaact
ggagcctgggggtttctggactctacagactcagggacgggacgaggtcatcccaacgtt
tatacgcacatccaggttgggaaagaaccaaataagggaaacactatggttcttagcaaa
agttctgaaagactttcaccaatgatgaaggaggtaaaagcaaaatttaagaaatcccag
agcatagatgaaatcgatactgggtcatacaaggtctatagcatccctatggacagctat
agttctagcatagaaaatcagggaagtgttgatcgagcagactttcctatacctctagaa
cagagcatgtccaggagccagtcagcaccaatgctggatgatgatctggatggctacggt
ttgaataaaagctctcagcagcagaagcccgccatcccaaagaaagtttaccattttgac
caaagcttcaacccacaaggagccatggatgttttgaaagcagagaggagggttcctcca
ccattccccaacacccctgaatatgtgaaccagcctgggaagactttgccaaaggaacta
gtcagtccaagaggctatcgaggttatccgcagatggaacaagtcttttcatttgctccg
aatgccactgatgattctcacaatcaacaactctctgtccagccccaacgctccaggccg
ggtttcctgaggcgagcggactctttagtaagttcgacggagatggcgctgttccgcaga
gtggctgagaaccatgaactccagctggcagagcactacagcagacctcaacaaataaag
agcatgctggagcaacagaacagcttgtctaccatggctgacactcagttccacaagagg
aatggtaggtatgatgaagattactcatcttatcaagaacccaaaaagcccatcatgggt
tatcccaccaagagtctgacacaacgtcgccccctgtctgcacggagctacagcacagag
acatacggggcatctcaggcaaggccagtgtctgcccggcccacaatggctgctcttcta
gagaaattgccttcagattacaatcttagtacatgcactgagaaaagccctgaagccgac
atgaacctgagacctgtccctcagaaacaagaggacctgacctccaaaatgccagtagac
tggagacagcagctgcttagacacatagaagcgaagagactagaccggagcgctgtcctt
aagcacaacacagtaaacttcggcatgctgtactctggaggctatgctgcaccgcatgcc
agcagaagcatgacaataaacttttacaataacacaaagcatgaaaaccaaacaactcag
tggctacctctaccaaatacaccttcacaacagagcaatattttagataatggacaagag
gtcatgtccccgagtagccagtgggcgccgtattcactgggacgaagagatgtgccacca
gagaacatgaatatcatcaaaaagcctggagttcacaatccccatcaacaacagacgatg
atgatcacttcagcccccccaccccaccggacagcccgcgaccagcagtatgagggtgcc
atcaacaaggtgtccatccagcagtaccagtccccgctgcccatgcccatcaccaccacc
agcccccggccccagagtgcccgctgcttcattcagactaaaggccagaagagcatggat
ggctttccagaacagctctgtgtgagaatcgagaagaaccctggccttggtttcagcatc
tcagggggaatcagtggacaagggaaccccttcaagccctcggacatgggtatctttgtt
actagggtacagcctgatggaccagcctccaacgttcttcgaccaggggacaaaattctg
aaggccaacggacatagtttcttacacatggagcatgaaaccgcagtgtctcttctgaag
aatttcccgaaaactgtggacttggtaatcttaagggagagcacaatataa
DBGET
integrated database retrieval system
