Danio rerio (zebrafish): 566033
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Entry
566033 CDS
T01004
Symbol
cwc22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
566033 (cwc22)
Spliceosome [BR:
dre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
566033 (cwc22)
Complex C
U4/U6.U5 tri-SnRNP related factors
566033 (cwc22)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
Cnd1
Motif
Other DBs
NCBI-GeneID:
566033
NCBI-ProteinID:
NP_001071037
ZFIN:
ZDB-GENE-060929-452
Ensembl:
ENSDARG00000014008
UniProt:
B0S6B1
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All DBs
Position
9:complement(43552515..43644261)
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AA seq
983 aa
AA seq
DB search
MAAESNESQTAMNMGPTSRDEPPSTEEMEQRQRKASTSSSEDGEHEDNDRRRVVGSPGSR
DGSPRVGSPVARASPRAKRDQKSSDSDSDSSDSDDGVMRKIRSSVMHIRRTSDEETKNRE
RSSSPDRHEKKSKSRSRSRSRSRSRSRSRSPRERYRRARRSRERERDRYGDRERYERRSS
RERDWEHRRRGRSASPDKNDKPPTEEPPVKKRKETLDPILTRTGGAYIPPAKLRMMQAQI
TDKSSLEYQRMSWEALKKSINGLINKVNVSNIANIIQELLQENIVRGRGLLARSILQAQA
ASPIFTHVYSAVVAIINSKFPQIGELILKRLILNFRKGYRRNDKQQCLTASKFVGHLINQ
NVAHEVLCLEMLTLLLERPTDDSVEVAISFLKECGLKLTEVSPRGINAIFERLRNILHES
EIDKRVQYMIEVMFAIRKDGFKDHPIIPEGLDLVEEEDQFTHMLPLEDEYNTEDILNVFK
LDPNFLENEEKYKTIKREILDEGSSDSGDDAGGSGDDEDDDEEDEEAAAGEEQEKVTIFD
QTEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPESQTKELCNMILDCCAQQRTYEKF
FGLLAGRFCLLKKEYMESFEAIFQEQYETIHRLETNKLRNVARIFAHLLYTDSVPWSVLE
CVRMSEDTTTSSSRIFVKILFQELCAYMGLPKLNERLKDTTLQPFFEGLFPRDNPRNTRF
AINFFTSIGLGGLTDELREHLKNAPKMIMTQNQEVESSDSSSSSSSSSDSSSSSGSSSES
DSSESDSDSSSDSDSSSSSGSSSDSDSRRKKASGKKKDKSKKSSKAANQRSPLEERPTKR
HENRRQDASKEDRRGSDKHNRDPQRRGQQDESPPARPRGEPERIRGQKEPHRHAQDHQDR
PTDSGRHKDDGKNSRANKDKDRRRSREKEPLRRSRDRSKSRERSRKEMDSRDSYGNGLER
ADKENRHSDRYKESRRKDDRRHR
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgagtcaaacgaatctcagacggcaatgaatatggggcctacatcgagagat
gagcctcccagcacagaagaaatggagcagcgacagagaaaggccagcacaagttcatct
gaggatggagagcatgaagataatgaccgcaggagggttgttgggtctccaggctccaga
gatggaagtccacgagtgggcagccccgtggcgagggcatcacccagagccaaacgtgat
cagaaatccagcgactctgacagtgacagcagtgacagtgatgacggtgtaatgcgtaag
attaggagcagtgtcatgcatatcaggcgtacctctgatgaagagaccaaaaacagagaa
agaagctcctcacctgaccggcatgaaaagaagtcaaaatcaagatcccgctcaagatcc
cgctccagatctcgctccagatctcgctctcctcgtgaacgttatagaagggctcgtagg
tccagggagcgagagcgggaccgttatggtgatcgggagcgttacgagcggcgctccagc
agagagagggattgggaacacaggaggaggggaaggtcagcctctccagacaaaaatgat
aaacctcccactgaggagcctccagtgaagaagaggaaggaaacgctggaccccatccta
acccgcaccggtggggcctatatcccaccggccaaactgcggatgatgcaggctcagatc
actgacaagagcagtttggagtatcagaggatgagctgggaagccctgaagaagtccatc
aatggtctgatcaacaaagtgaacgtttctaacatcgccaacattattcaggagctgctg
caggagaatattgtgaggggcaggggtcttctagccaggtctatacttcaggctcaggct
gcgtctcccatcttcactcatgtatactctgcagtggtggccatcatcaactccaagttt
cctcaaattggagaacttatcctcaagaggcttatccttaatttccggaaaggttacagg
aggaatgataaacaacaatgtctcacagcgtccaagttcgtaggtcatctcatcaaccag
aacgtggctcatgaagtcctctgtctggagatgctgaccctgctgttggaaagacctact
gatgacagtgtggaggtggccatcagcttcctaaaagagtgtggtctcaaactgacagag
gtctctcctagaggcatcaacgccatctttgaacgtctgaggaacatcttgcatgagtca
gagatagataagcgtgtacagtacatgattgaggtgatgtttgccatcaggaaggatggg
tttaaggaccatcccatcattccagaaggacttgacctagtggaggaagaggaccagttc
acacacatgcttcctctagaggatgaatacaacacagaggacatcttaaatgttttcaag
ttggatccaaacttcctggagaacgaggagaagtacaagacaattaaacgggaaattctt
gatgaaggaagcagtgattctggtgacgatgcgggcggcagtggagatgatgaagacgat
gatgaggaagatgaagaggcggcagctggagaagaacaagagaaagtcaccattttcgac
cagacagaggtgaacctggtcgcgtttcgtagaacgatttacctcgccatccagtcaagc
ttggacttcgaagaatgcgcccacaagttgataaaaatggatttccccgagagccagacg
aaagagctgtgcaacatgatcctggactgttgtgctcagcaaagaacatatgagaagttc
tttggtcttctagctgggaggttttgcctgctgaagaaagagtacatggagagctttgag
gcaattttccaggagcagtatgaaacaatccaccggctggaaaccaacaaactgcgtaac
gttgctcgaatctttgctcatctcctctacacagactcagttccatggagtgtccttgaa
tgcgttagaatgagcgaagacacaacaacatcctccagtcgaatctttgtgaagattttg
ttccaggaactttgtgcttacatgggtttgccaaaactaaatgagagattgaaggacacg
actctccagccattttttgaaggcctgtttccacgcgataacccgaggaacacaagattc
gccattaatttcttcacatctatcggccttggaggactaacggatgagctgagggaacat
ctgaaaaacgctcctaagatgatcatgacccagaatcaggaagttgagtcgtcagattct
tcctcatcctcctcatcctcttcagactcctcttcatcttcaggttcctcatctgaaagt
gacagcagtgaaagcgactctgattcgtccagtgactcagactcttcttccagcagtggc
agctcttcagactctgactccaggcgcaagaaggcctcaggtaagaaaaaggacaagagc
aagaaatccagcaaggcagcaaaccagcgatctcccttagaggaacgacccaccaagaga
cacgagaaccgccgtcaggacgccagcaaagaggaccgacgtggatctgataaacacaac
agagatcctcagcggcgcggacaacaggacgagtcacctcctgctcgaccgagaggagaa
ccagagcgcataagaggacagaaagaacctcacagacacgctcaggaccaccaggacaga
ccgacagattcaggcaggcacaaggacgacggcaaaaactcccgagcgaacaaggacaaa
gatagacggcggagcagggagaaggagcctctgcggcggagcagggacaggtcaaagtca
cgagagaggagccgcaaagagatggactccagggactcgtacggaaacggcttagagagg
gcagacaaagagaaccgccattctgacagatacaaagagtccaggaggaaagacgacagg
agacacagatag
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