Danio rerio (zebrafish): 566140
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Entry
566140 CDS
T01004
Symbol
cthrc1b
Name
(RefSeq) collagen triple helix repeat-containing protein 1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dre03037
]
566140 (cthrc1b)
Cilium and associated proteins [BR:
dre03037
]
Other cilia and associated proteins
Stereociliary proteins
566140 (cthrc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
566140
NCBI-ProteinID:
XP_694502
ZFIN:
ZDB-GENE-050420-46
Ensembl:
ENSDARG00000001971
UniProt:
F6P0H3
LinkDB
All DBs
Position
16:complement(51937237..51988135)
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AA seq
233 aa
AA seq
DB search
MGHFNTQILLISCLLFTCYEAEKIKTRGLRQKDVDYIEKYSGCLQGPAGTPGRDGNPGAN
GIPGTPGLPGRDGVKGQKGECVSERFEEPWKPNYKQCAWNALNYGIDLGKITECTFTKQY
ADSALRVLFSGSLRLKCKNACCQRWYFTFNGAECTAPLPVESIIYLDQGSPELNSTINIH
RTTSVEGLCEGVRKGLVDVAVWVGTCGDYPHGDASTGWNSVSRIIIEELPLSS
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgggacacttcaacacacaaatattgctcatctcctgcctattatttacatgttacgaa
gcagaaaaaatcaaaaccagaggtctgcgccagaaggatgtcgactacatagagaaatac
tccggctgcctgcaggggcccgcaggcactccgggacgggatggtaatccgggagccaat
gggattcctggcactccaggtctgccaggccgagatggggtcaaagggcagaagggcgag
tgtgtgagcgagaggtttgaagagccctggaaacccaattataaacagtgtgcctggaac
gcactcaactatggcatcgacctgggcaagatcacagagtgcacgttcactaaacagtat
gcagacagtgctctgcgtgtgctgttcagcggctctctgcggctcaagtgtaagaacgct
tgctgtcagcgctggtacttcacttttaatggggccgaatgcaccgctccgctgcctgta
gagtccatcatctacctggaccagggcagcccagagctcaactccaccatcaacatccac
agaaccacatccgttgaagggttatgtgaaggcgtgcggaaaggcctggtggatgtggcg
gtctgggtgggaacgtgtggcgattatccgcatggagacgcctccaccggctggaactct
gtgtcccggatcatcatagaagagcttcccctgagcagctga
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