Danio rerio (zebrafish): 566408
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Entry
566408 CDS
T01004
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform 1
KO
K25949
coiled-coil domain-containing protein 50
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
566408 (ccdc50a)
Membrane trafficking [BR:
dre04131
]
Autophagy
Other autophagy associated proteins
Others
566408 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
566408
NCBI-ProteinID:
NP_001352926
ZFIN:
ZDB-GENE-150115-1
Ensembl:
ENSDARG00000105136
UniProt:
A0AB13A9X1
LinkDB
All DBs
Position
22:24139748..24183581
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AA seq
581 aa
AA seq
DB search
MADFSIDQKNLPGVKEVCRDFALLEDHCLAHNLQEQEIESHLASNVYKSRLAQQDLQVAK
RLQQEEDLRAKAESQRQHRRIERIDNEIAQEIQDQLVRQAEQQRQQEEKDEAIARKLHER
EMKEERKRQKQMETNIEEEFYEDKASRFPSDLREPNPHSTSSDYRKEKHRDYNQMISPYS
SPNPDRKRYPNSHSRYPEYEPVEFSRSKRPEITNKGREYYSPDRQPKISEDHLKERNQPL
DLDNTEPRRKKKQDQGDNFEPVVRLKEKPHRDYSADRDRVWDKERNKDRERERDGQRTKD
RQRDRNRTKSQDRLFSGDVRGRNMDRAMDQNIDGHRSRDRQRERGRDGNRERHRSREREL
DYSLSPSRGRSEDNLEWEDFSNRPRLPIGPNEVFEEPTFRGHSNDGQSPGYSSRERGRKV
RGEYGMKEATHGLAQLDLHDQEFRDLEVARKLQDEELKAVQVDKRAAQVAQDEEIARRLM
EEEKREYKKSKDKEKQVIERRRPELEYKPVQEDVVRPRTREEVRSREEEYQRARNHKPAR
PPPPTQHYENINPSYAYVESPYSPRPPSRPEAAYKGAYYRQ
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttagtattgatcagaaaaacctgcctggcgtaaaagaggtgtgtcgggac
tttgccttgctcgaagaccactgtctggcccacaaccttcaggaacaggagattgagagc
cacttggcatccaacgtgtacaagagccgcctggcacagcaggacctgcaagtggccaaa
cgtctgcagcaggaggaggacctgcgggccaaagccgagagccagagacaacaccgtcgc
atcgaacgcattgacaatgaaattgctcaggagattcaagaccaactggtccgacaggct
gaacagcagcggcagcaggaggagaaagacgaggccattgcacgaaagctgcatgagcga
gagatgaaggaggagaggaaacgacagaagcagatggaaacaaacattgaggaggaattc
tatgaagacaaagcctcccgatttccatcagacctgcgggagccgaaccctcattccact
tcttcagattacagaaaagagaagcaccgtgactacaaccaaatgatttccccttacagc
tcccccaacccggacagaaaaagatatcctaatagccatagtcgttatccagaatatgag
cctgttgagttcagccgatcaaagcgtccagagattacaaacaagggaagggagtactac
tcacccgatcgacaaccaaaaatctctgaagatcatttgaaagaaagaaaccaacctctc
gatctggataacacagaaccccgtagaaagaagaaacaggatcaaggggacaactttgag
cctgttgtgcggttgaaggagaaaccacatagggactactctgctgaccgagacagggtt
tgggacaaggagaggaacaaggatcgagaacgagaaagggatggacagagaaccaaggac
aggcaaagagaccgaaaccgaacaaaaagtcaagatcgcttgtttagcggagatgtcagg
ggtagaaacatggacagggcaatggaccaaaatattgatgggcatagaagcagagataga
caaagagaaagaggcagagatgggaacagagaaaggcacagaagtagagagcgagaactg
gactacagtctgtccccttctagaggaaggtcggaagacaacctggagtgggaggatttc
agcaacaggcctaggcttcccattggtcccaatgaggtgtttgaggaacccactttcaga
ggccactcaaatgatggccaatcccctggctattcctccagagagagaggccgcaaggta
cgaggagagtatggcatgaaggaagcaacacatggactggcccagttagacctacatgac
caagagttcagagacctggaggtggcacgcaaactacaagatgaagagttaaaggctgtc
caagttgacaaacgagcagctcaagttgcacaagatgaggaaatagcccgacggctaatg
gaggaagagaaaagagaatataaaaaatcgaaagataaggaaaaacaagtgattgagagg
agacgacccgagctagaatacaaaccagtgcaagaagatgtagtacgaccacgaacacga
gaagaggtgcgtagcagagaggaggagtaccagagagcacgcaaccacaaacctgcgagg
cctccacctcctacacagcattatgagaacataaacccaagctacgcctacgtcgagagc
ccatactcgcctcgacctccatcaaggccagaagctgcgtacaaaggtgcctactacaga
cagtga
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