Danio rerio (zebrafish): 566454
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Entry
566454 CDS
T01004
Symbol
six2b
Name
(RefSeq) homeobox protein SIX2b
KO
K19472
homeobox protein SIX2
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
566454 (six2b)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
566454 (six2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Motif
Other DBs
NCBI-GeneID:
566454
NCBI-ProteinID:
NP_001122206
ZFIN:
ZDB-GENE-080723-23
Ensembl:
ENSDARG00000054878
UniProt:
B3DIJ7
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All DBs
Position
12:complement(25610224..25612007)
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AA seq
285 aa
AA seq
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MSMPPTFGFTQEQVACVCEVLQQGGSIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKVLESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRCVLKEWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENEGANPNGHNPLTSHVNENKSLCESSDDDKSPAGTPDHTNMSPAILMPSSSG
LPPLHSFAPPPGPSASISDTQSHHHFSMHDGLLNPMTASLVELGS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgccaccaacttttggatttacccaagagcaggttgcctgcgtgtgcgaggtc
cttcagcaaggtggaagtatcgaacgtcttggacgatttttgtggtctttaccagcttgt
gagcaccttcacaaaaacgagagcgtattgaaagcgaaagcagtagtagctttccaccga
ggcaacttcagggagctctacaaagtattagagagccaccagttttctccgcacaaccac
cctaaacttcaacagctgtggctgaaagctcactatattgaagcggagaaattgcgcggt
cgtcctttgggcgcagtgggaaaataccgcgtgcgcagaaaattcccactgcctcgcagc
atttgggatggagaggagaccagctactgttttaaggagaagagccggtgtgtgcttaaa
gagtggtacacccacaacccatacccttccccgagagagaagagagaactggccgaggcc
acgggtctcaccacgactcaggtcagcaactggttcaagaacagaaggcagagggatcgt
gccgctgaagccaaagaaagggaaaacgagggtgcaaatccaaacggtcacaaccccctg
acctctcacgtgaacgaaaacaaatctctatgtgaaagttcagatgatgacaaatccccc
gcgggaaccccggatcatactaacatgagtccagcgatcctcatgccctccagttcaggt
ctgccacccctgcacagcttcgctcctccgcccgggcccagcgcctccatcagcgacact
cagagccaccaccacttctctatgcacgacggccttctcaaccccatgacggccagcctg
gtggaacttggatcataa
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