Danio rerio (zebrafish): 566484
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Entry
566484 CDS
T01004
Symbol
scaf11
Name
(RefSeq) protein SCAF11 isoform X1
Organism
dre
Danio rerio (zebrafish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
566484
NCBI-ProteinID:
XP_005164517
ZFIN:
ZDB-GENE-041210-22
Ensembl:
ENSDARG00000045885
UniProt:
Q5SPB2
LinkDB
All DBs
Position
4:1619556..1640356
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AA seq
1321 aa
AA seq
DB search
MQEGPGKGGQNSEDTLEDEESQRCPICLNRPRRSDRAVPDCCRHVYCSACILRWAQMVQS
CPVDRRPFSVIFLQGSSQQCIKLPVKIKPRLMDNRTGCGQDGQRMCGNSAAETGSVERTQ
EKRANPKQKCHRKSGDSDAFVDSNKKASGDSCHTLLPTQHFHSSQQGAMVGTVMAGSVEV
CEDGVQWRRLERKRRLHQASVPSFSTCVPRVSVRSHLLLSAVSASLNLLLSEHTVPHGMV
CAVTCPKGEERKGTRGSGSKSSVKPAEAPATRRSSRRSRGEAEDSSSAHSQQNDTDNTSQ
TLNDTASTSRGQQGNNPRSGVKTRGRPKKLKVEKREDEEQEPEAENHKEDGAAESEESKT
DQKANSDQIDGGQDPVDTKEKMEEENETSPSENKPDDADNQDEETAEEEEVVTKNVVEED
DNSRQEVMTDDEDQVELMNASPELNQDCSSPSRSLEPQESPSDSQDAVLSFKEQLTAESP
TDASDQDLDLKPELDSTEDNPEKQDSSSFPDLQDIADPKPEPDTTEEAYTQDSSNLPALQ
EIVDLIPEPDTTEEVDQSPVPMVPEEISTLETRPLVPEEISAPETSPSVPGEISAPETSP
SVAEEIFAPETSHPVPGDSSAPETSPPVPGDSSASETKLSVPADSSVPETRPSVPGESSA
PETRPSVPGDSSAFETRPSVPGDIFAPETMDTNVRSSQDNTDLIPMECDSPASESAAEVE
MVPAAIVPQMANQDPAEKIESSKESKTSDKKEGRSRRSRFHSSSTTWSPNRESRNERRSR
SRSRDRSHKTRSTSRNRDHQEEERDSRRNRSRSRSRERSRRRRSRSRSRNRSRPGRRSPS
QERADHGGHSPRKRDSWGGGGEGWRGRGGGRGFRNSNWRNNTEKPAHFSTRDPVSSDNGN
FHESSPDRGRNENPDWVRERERERSWMDADNRGREPARREENLGDGDTWSRGGWSAGRGR
GGTHWASSQQGEPGDNWRQRNSFSGTTNNADSYNRFNDSRAGGKRKESEGAEAPLDRSGW
SSASSWAVRRTLPADVQNYYSRRDRGGGGGGNNIWNKQEEDQSAPTVPKQADPPQNEPSA
PLPTEAVPAMPPPLLPHQMGVMGVMRFPMGPAPLLQRPPTAGLQAPPQFSLPPPVPVQLH
QAGPLMQVPSIAVQALPPPPPPPPPVQQGGFTVVPPESHPSQQAMPIFPAPVKMSFKPVP
TKVVCGPPPPPAVPVSAVQPSSTTSSSSSTQPKAHADSSKKEKEKKLQIQERAVNEVKAA
IKPYYQKNEINKDEYKEIVRKAVEKVCHSKSGEVNADKVATLVKAYVDKYKHIRKSKTEK
S
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaagggccaggaaagggtggtcagaactcggaggacactttggaggatgaagag
tctcagcgctgcccgatctgtctgaaccgccccagacggagcgatcgagccgttcccgac
tgctgcagacatgtctactgctctgcttgcatccttcgctgggcacagatggttcagtcc
tgtccggtggaccgcagacccttcagcgtgatcttccttcagggctcctcgcagcagtgc
attaagcttcctgtgaagatcaagcccagactgatggacaatcgcacgggctgcggtcag
gatggtcaacgcatgtgtggaaactctgcggcagagaccggaagtgtggagagaacgcag
gagaaaagagccaatcccaaacagaaatgccacagaaaatcaggtgactctgatgcattc
gtggattcaaataaaaaggccagtggagactcatgccacactcttctgcccactcagcat
ttccactcatcacagcagggagcaatggtcggcacagtcatggccggatcggttgaggtt
tgtgaggacggcgtccagtggaggagattagagagaaagcgcaggttgcatcaagcgtct
gttcctagtttttctacatgtgttcccagggtgtcagtccgctcacacctacttctgtca
gctgtctctgcttctctgaatctgctgctttcagaacatacagttcctcatggcatggtt
tgtgccgtcacctgccccaaaggtgaggaaagaaaaggcacaaggggttctggatcaaag
agctctgtgaagccggcagaagctcctgcaacccggcggtcctccagacgcagccgagga
gaagcggaggattcctcttctgcacactcacaacagaacgatactgacaacacctcacaa
acgctaaatgatactgcgtctacaagcagaggccagcaagggaataatccgagatctgga
gtgaagacaagaggacggccaaagaagctgaaagtggagaaacgcgaggatgaggagcaa
gaacctgaagcagaaaatcacaaggaagatggagcagctgaatccgaagaatcaaaaact
gaccagaaagcaaactcggatcagattgatggtgggcaagacccagtggacacaaaggaa
aagatggaggaggagaatgagacaagtccttctgagaacaaacctgatgatgctgataac
caggatgaggaaactgcagaagaagaagaagtggtcactaagaatgtggttgaagaagac
gacaatagcaggcaagaagtgatgactgatgatgaagatcaggtggagctgatgaatgct
tcaccagaactgaaccaagactgctcgtctccttccagatctttagaaccacaggagtct
ccgtctgattcccaggatgctgttttatcttttaaagagcaactgacagctgaatcacct
acagatgcttcagatcaggatttggatctgaaaccagagcttgacagcacagaagacaat
cctgaaaagcaggattccagtagctttccagatctccaagacattgcagatccgaaacca
gagcctgacaccacagaggaggcttacacacaagactccagtaaccttccagctctacaa
gagattgtggatttgataccagagcctgacaccacagaggaggtggaccagagccctgta
ccaatggttcctgaagagatttctactctcgaaactagaccattagttcctgaagagatt
tctgcacctgaaactagtccgtcagttcctggagagatttctgctcctgaaactagtccg
tcagttgctgaagagatttttgctcctgaaactagtcaccctgttcctggagatagttct
gctcccgaaactagtccgcctgttcctggagatagttctgcttctgaaactaaactttca
gtacctgcagatagttctgttcctgaaactagaccgtcagttcctggagaaagttctgct
ccagaaactagaccgtcggtacctggagatagttctgctttcgaaactagaccttcagtt
cctggagatatttttgctcccgaaacaatggacactaatgtgaggagttctcaggacaac
actgacctcattcccatggagtgtgattctcctgcatcagagagtgctgctgaggtggag
atggttcccgctgcgattgtgcctcagatggccaatcaagatcctgctgagaagatagag
agctctaaagaatcgaaaacctcggataagaaggagggacgatcccgcaggtcccgcttc
cactcatcttcaaccacttggtctccgaaccgggagtctaggaatgaacgcagatcaagg
tctcgatcccgggaccgaagccacaaaactcgctccacatctcgaaaccgtgaccaccaa
gaggaagaacgggacagtcggagaaaccgtagtcgtagccgaagcagagagcgtagccgc
agacggaggagtcgctctaggtccaggaacaggagcagacctggacgccgcagcccgtcc
caggagcgtgcagaccacggaggacactctccccgaaaacgagactcctggggtggagga
ggagaaggatggagaggcagaggtggtggacgaggatttcgcaattccaactggaggaat
aacactgaaaaacctgcacatttctcaactagagaccctgtttcttccgataatggaaac
ttccatgaatcctcacctgatcgagggaggaacgagaaccctgattgggtgagagaaagg
gagagggagaggagttggatggatgctgataaccgtgggcgagagccggcgagaagagag
gagaatttgggagatggagacacctggtctcggggcggctggagtgctggacgtggcaga
ggaggcacacactgggcgtccagccagcagggggagccaggagataactggaggcagcgc
aattctttctcagggaccactaataatgcagattcatacaatcgctttaatgatagcaga
gctggagggaagaggaaagagtctgaaggtgcagaggctccactggatcgctccgggtgg
tcgtcggcgtcgagttgggcagtgcggcgaactcttcccgctgatgtgcagaactactac
tcgcgcagagatcgaggtggtggcggcggtggaaacaacatctggaacaaacaagaggag
gatcagagcgcaccgactgtcccaaaacaagcagatcccccacagaatgagccaagtgcg
ccgctgccaactgaggctgtgccagccatgcctccgcccctgctgccgcatcagatgggt
gtgatgggggtcatgcgcttccccatgggccccgctccactgctccagaggcctcccacc
gcaggtctgcaggctccaccacagttcagcctgcctcctccagtaccagtgcagctccac
caggctggcccgctcatgcaggtgccctctatagcagtgcaggctcttcctccaccgcct
ccgcctcctccacctgtgcagcagggcggatttactgtggtgccgcccgaaagccaccca
tctcagcaggcgatgcccatttttcctgcgccagtcaaaatgtctttcaaacctgtgccg
accaaagtggtttgtgggcctcctcctcctcctgctgtgccggtcagtgcggtgcagcca
tcctccaccacctccagcagctccagcacgcagcccaaagcccacgcagacagctccaag
aaggagaaggagaagaaactgcagattcaggagcgcgccgtcaatgaggtgaaagcagcc
attaagccatattatcagaagaacgaaatcaacaaggacgaatataaagagatcgtgcgc
aaagctgtggagaaggtgtgtcacagcaagagtggcgaggtgaacgcagacaaggtggcc
actctggtgaaggcgtatgtggacaaatacaaacacatccgcaagagcaaaactgaaaag
agctga
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