Danio rerio (zebrafish): 566749
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Entry
566749 CDS
T01004
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dre03400
]
566749 (smc5)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
566749 (smc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_25
AAA_29
AAA_13
AAA_21
ABC_tran
Motif
Other DBs
NCBI-GeneID:
566749
NCBI-ProteinID:
NP_001180470
ZFIN:
ZDB-GENE-061013-288
Ensembl:
ENSDARG00000044282
UniProt:
E7F0W1
LinkDB
All DBs
Position
10:complement(17898348..17925254)
Genome browser
AA seq
1073 aa
AA seq
DB search
MEQPHKRKRKSHELSNSQPSDREPATSTSANAREGDFMEGAIVRITMHNFLTYDHSEVFP
GPKLNMIVGANGTGKSSIVCAICLGLAGKTSVLGRGDKVGLYVKRGCQRGSVEIELYRTR
GNLIVTREIQVENNQSTWMLNKKHASQKAVEEAVRELHIQVGNLCQFLPQEKVGEFAKMS
NSELLEATEKSVGPPEMYEFHCELKTFRTKERDLENVCKEKGNFLEKARQRNERNKLDVE
RYYMKKRHLDRIQMLEKKKPWVEYETARKELEGVKKERDEMKRKLRFLKEAQEPLLRKIR
SVESELQPIEQQMKEMTNRIKEATQKCKQKHDQLELKNKEVDDIKQDMSLKQTEEADRQK
RIGHTQLMIRDLQKELQNMGTIEDVTPQIEAINAELRNIQEERARLESESLDLRRDKDEI
TGEFARLQNRLRSLDDMMKIKEEKLRSRFRDTYTALEWLRKNRDRYEGVVHEPMMLVINV
RDARHAKYIETHISVNDLRAFVFQRQDDNDKFMNEMRDTQRLRVNSIIAPTESCSKRPPS
RPIETLKPYGFISYLREMFDAPEEVMSYLCHQYRVNDVPIGTEKTKGMIESVIKDLQLRT
IYTAEERYNVKKSAYSNNVVSSNSALRPPQFLTTTIDVEERRQLEEQLRAAERQKQSIDQ
RMAAIREQQANLDRRDNELRANKKKLSDLKSKKRQLEQKISTKQDSLRQMEQNEINLVAI
EEEANAKIAAVNNKKVTIMGEYLSHLQSKARLNMEKVYLALQSAGLSAEKTKLETDVRES
SAELKRAEVDYTKLDKIKTNLLMTCKTLMKRASEICNMTPGETAVPEELHAAFSLLPETL
DEIDAMLNEERTRAECFTGLSDAVVDEYNRREQEIKNLEKELDDKTNELTTYRRNIAEAK
ERWLNPLKKLVELINVRFSDFFQSMQCAGEVDLHSENEEEYDKYGIRIQVQFRRNTRMHE
LTPHHQSGGERSVTTMLYLMSLQELNRCPFRVVDEINQGMDPVNERRVFDIVVRAACGVN
TSQYFFITPKLLQNLQYAEQMTILCVHNGPQMLPPNKWNEKAFIQRARRRNRT
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggagcagccgcataagagaaagcgaaaaagccacgaattgtccaactcacagccctcc
gatcgtgaacctgcaacgtccaccagtgcaaatgcccgagaaggagatttcatggagggc
gcaatcgtccgcatcaccatgcataacttcctcacgtacgatcactctgaagttttcccc
ggacccaaactgaacatgatcgttggagccaacggcacagggaagtccagtatcgtgtgt
gccatctgtctgggcctggctggaaaaacatctgtcctgggccgaggagacaaggttggt
ctgtatgtgaagagagggtgtcaaagaggctcagttgaaatagagctgtacaggacacgt
ggaaacctgatagtcaccagagagatccaggttgagaacaatcagtcgacatggatgctt
aataaaaaacacgccagtcagaaggcagtggaggaggccgtaagagagctgcacattcag
gttgggaacttgtgtcagttcctaccacaggaaaaagtcggtgagtttgctaaaatgagt
aatagtgaacttcttgaagccactgagaaatctgtcggcccaccagaaatgtacgaattt
cactgtgagctcaagacatttcgcaccaaagagagagatttagagaatgtgtgtaaggaa
aaaggaaacttcctagagaaggccagacagaggaatgaaagaaacaagctggatgtggag
cgctactacatgaagaagcggcatttagacaggatccagatgcttgagaagaagaaaccc
tgggtggagtatgagacggcacgtaaagagctggagggggtgaagaaggaaagagatgaa
atgaaaaggaagcttaggttcctgaaggaagctcaggagccgctgctcagaaagatccgc
tctgtggagagtgagctgcagcccatcgagcagcagatgaaggagatgaccaaccgtatc
aaagaggcaacgcagaaatgtaagcagaaacacgaccagcttgaactgaagaataaagag
gttgatgacatcaaacaggacatgagtctaaagcagacggaggaggcggacaggcagaag
cggattggacacacgcaactgatgatcagagatctgcaaaaggagcttcagaacatgggc
accattgaggacgttactcctcagattgaggctatcaatgcagagctgaggaacattcag
gaagaaagagccagactggagagtgagagtctggacctgcgcagagataaagatgaaatc
actggagaatttgcgcgtttgcagaatcgcctgaggagtctggatgacatgatgaagatt
aaagaggagaaattgcgcagccgctttcgtgacacatacacagcccttgagtggctgagg
aaaaatcgtgatcgttatgaaggagttgtccatgagcccatgatgctggtgataaatgtt
cgtgatgctcggcatgcaaaatacattgagactcacatttctgtcaatgacttgagagct
ttcgtcttccagagacaggatgataacgacaaatttatgaatgagatgagagatacgcag
aggctgcgagttaacagcatcatcgctcctacagagtcttgctctaaacgaccaccgtca
cgacccatcgagaccctcaagccttacggcttcatctcgtacttgcgagagatgtttgat
gctcctgaggaggttatgagttatttatgccatcagtacagagttaacgatgtaccaata
ggaacagagaagaccaagggcatgattgaatcggtgatcaaagaccttcagttgagaacg
atttacacagcggaggagaggtataatgtgaagaagtctgcttactccaataatgtggtc
tccagtaactcggctctgcgaccaccacagttcttgactaccaccatagatgtagaggag
aggcgacagctggaggagcagctgagggcagcagaaaggcagaagcagagcattgatcag
cggatggcagccatccgggagcagcaagctaacctggaccgtcgtgataatgagctgcgt
gctaataagaagaaactgtctgatctgaaaagcaagaagagacaactggagcagaaaatc
agcacaaaacaggacagcttgaggcagatggagcagaatgagatcaacttggtggcaatc
gaagaggaagcgaatgccaagattgctgctgtcaacaacaagaaagtgaccataatgggg
gagtatttgagtcacctgcagtcaaaggccaggctgaatatggagaaggtgtatttggct
ctccagagcgcaggtctcagtgctgagaaaaccaaactggagacggacgttcgagaaagt
tcagctgaactcaagagagcagaggtagactataccaagctggacaagataaagaccaat
ctgttgatgacttgtaagaccctgatgaaacgggccagtgagatctgtaacatgactcca
ggagagacggccgtcccggaagaactacatgcagctttcagcttgttgcctgagactctg
gatgagatcgatgccatgctgaatgaggaaagaaccagagctgagtgtttcacaggcctc
agtgatgctgtggtggatgaatataacaggcgtgagcaggagattaagaacttggagaag
gagctggacgataagactaatgaactgacaacctatagaagaaacattgcagaggctaaa
gagcgctggctgaatccgctgaagaagctggtggagctgatcaatgtgcgcttcagtgat
ttctttcagtctatgcagtgtgcaggagaggtggatctgcactcagagaatgaggaggag
tacgataaatatggcatccgcatccaggtgcagttccgcagaaacacacggatgcacgag
ctcacgccacaccatcagagtggaggagagcgcagtgtcaccaccatgctttacctcatg
tccctgcaggagctcaaccgctgccccttcagagtggtggacgagatcaatcagggaatg
gatcctgtcaacgagagacgcgtgtttgacattgttgtgagggcggcctgtggtgtgaac
acgtctcagtatttcttcatcacacctaagcttctccagaacctgcagtacgccgagcag
atgaccatcctctgtgtgcacaacggccctcaaatgctgccgccaaacaagtggaatgaa
aaggctttcatccagcgagccagacgcagaaaccggacctga
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integrated database retrieval system
