KEGG   Danio rerio (zebrafish): 566796
Entry
566796            CDS       T01004                                 
Symbol
lama4
Name
(RefSeq) laminin subunit alpha-4 precursor
  KO
K06241  laminin, alpha 4
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04510  Focal adhesion
dre04512  ECM-receptor interaction
dre04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    566796 (lama4)
   04518 Integrin signaling
    566796 (lama4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    566796 (lama4)
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 EGF_laminin Laminin_I EGF_LMN_ATRN Laminin_G_3 ConA_2nd_BAM2
Other DBs
NCBI-GeneID: 566796
NCBI-ProteinID: NP_001034154
ZFIN: ZDB-GENE-040724-213
Ensembl: ENSDARG00000020785
UniProt: Q2TJF5 A0A8M1N887
LinkDB
Position
20:253884..294741
AA seq 1871 aa
MASLLSGSVCFLYVLSALVPADSTQQFNTVYRVCARGYFLSDQETCLPCNCKGHADSCED
ITGICIDCRDHTLGDFCELCEDRFLPVFLPDGTFMCRPCACPLSLESNNFAAHCDRRGEF
LRCVCQDGYAGHYCERCAPGYYGNPMELGNSCKKCDCNGNSDPNLIFNECHNVTGKCLNC
WGDTAGDNCERCAPGFYGDAISAKDCQECQCNKCGTASCDDRSGVCHCKPGVTGQLCDRC
EDGHSGFCTCMGCRRCECASAALRATCHPLTHSCQCRPGAGGRYCERCLPGFWDYSPSGC
RKCDCPEENCDLHTGECLPELSQISECNISCDACIWNLIGDIRQSNKTLDQVRNSVLNIS
TGAAANDRLKYYNYTAHRLQAQFRGWRKNYAMMSGDTDVLEEETQNLLTDMDQFAEEENE
VQNLGKQVDQETLNSSTRAKTLTANLSSLNVLIEDMIRDWELYGVYQELDPQVKLQKLAE
AERILGWMRKLNLSPKEPLATDESSEAHELLRRVRSFDRNLMTTQGRLPPMQEVLGRFTS
KLLQAQDLLSKAEDALKQAINKYKSNQLKLQRREAQQQRLKDIQDGVDQTIVNAAAVLSE
ANHTVLEVEDVITNVREQHAEIDGARVLLERRTEKISQSDRELVLRAEDHADQLQRHAEE
PQHNLKGSDANGHVQKALNAFNVYDNIVKSVDDANITSLTALNISSRTHGAVDKLSSQLN
LMRSQSAKVLNEASSLHFQQQDSESIVLDNKKYIEETNEMMDGSSKKIAKIITEINAIHT
DRTPKRLQFTQEVAEGTLNRSAEVLEKVTPILKRVEQWDGNMKSEAYSAAAFDRTVLSAG
EAVKDLSAIVPELLSKLRVVEEKKPVNNVTTSIMKIRGLIAQARSVAKKVQVSMKFDGQS
AVEVHPHTNLDELKTVTSISFYIRVDPDKDPIEDRFLLYLGDKQGKRDYMGLAIKNDNLV
YVYKLGEEEVEIPLSSKPVSSWPPVFNFVKVERLGRHGKVFLTVPSQDTTAEQKFIQKGE
PVGTDTLFDLDPKDMVFIVGGVPPGVTVPPILSLAPFVGCIELETLNNDVISLYNFKQLH
KMDVKASAPCPRHKLAFSQSRVTSYLFDGTGYALVNNIERRGKIGVVTRFDIEVRTVANN
GILFLMVNETNFFVLELKNGFLRLMYDFGFANGPVIIETNLAKLQINDARYHEVSVIYHH
SKKIILLVDRSHVKSFESEKKPLPFSDIYIGGAPSRILQSRPELTSLIGLKGCVKGFQFQ
KEDFNLLEEQGTIGISSGCPEESFMSHKAYFTGNGYLSSSDKISPFQSFEGGLSFKTLQP
SGLLFYHRDGSDEFSLSLENGAVVLQAKGTRVKSQKKHYSDGRSHFLVASVTNQKYEIVI
DDKDKQDKKKPSSTSQSDNTPKAFYYGGSTSSSILNLTGCISYAYISRQDRDIEPEDFQR
YSENVQASLQDCPIERPPSALLKDSRDSSRRSAGHSRKVGRDESGLPHGLKSNPLNIPEK
EEASCYLSSRPRATPHANHYGGSAHSRHEYTGIASAIKHESHFSLSLKTRSAFGLIFYLA
DASGENSMALFLTHARLVFTFSSGQSQVRIRSKEKYNDGQWHDIIFIRAGNMGRMLIDGL
TVLEDRAPGRNTSLLVQDPLYVGGVPPHQAMKNIQRTSVSSFTGCVRSLQLNGRSLTSAS
HSFGVTPCYEGPSEPGTYFAEEGGYVLLDDSFHFGSSFKMAMEVRPRVASGVLLHVFMEQ
KEYLTVYIYQSQVVVVVNNGIAEFSTHVSPTQEICDGNWHKITVIRDGSVLQLDVDSEVN
HVVGSVSDAAQSSSSPVFIGGAPDSMLSHSLLSRRGFTGCMRSVSVNETPVSFSKAVLVS
GSVGVGACPSA
NT seq 5616 nt   +upstreamnt  +downstreamnt
atggcctctctgctgtctggatctgtctgctttctgtatgtcttgtcagcactcgtgccc
gcagattcaacacaacagttcaacacagtctacagggtgtgtgctcgagggtacttcttg
agtgatcaggagacatgtctgccctgtaactgtaaaggccatgcggatagctgtgaggac
atcaccgggatctgtattgattgtcgggaccacactcttggagatttctgtgagcagtgt
gaagacagatttttgcccgtgtctcttcctgatggcacctttatgtgtagaccgtgtgcc
tgcccgctgtcactggagtctaacaactttgcagctcactgtgataagaggggtgagttt
ctgagatgtgtctgccaggacgggtatgctgggcactactgtgagagatgtgctccgggt
tattatggcaaccccatggagttgggcaattcttgcaaaaagtgtgattgtaacggcaac
tctgaccccaacctgatcttcaacgagtgccataatgtgacaggaaagtgcctgaactgc
tggggtgacactgcaggggacaactgtgaaaggtgtgcacctggtttctatggcgacgcc
atcagtgctaaagactgtcaagagtgccagtgcaataagtgtggtactgcatcatgtgat
gacaggtcaggtgtgtgccactgtaagcctggggtcacaggtcagctgtgtgacaggtgt
gaggacggtcattctggatttggcacctgcatgggttgccgtcgatgtgaatgtgcttct
gctgccctgcgtgccacctgccaccctctaacacacagctgccagtgccgcccgggggct
ggaggtcgatactgcgagcgctgcctgccgggattctgggattacagcccatccggctgc
aggaaatgcgactgtccagaagagaactgtgacctgcacacaggagagtgtctgcctgag
ctctcgcaaatcagcgagtgtaatatcagctgtgacgcgtgtatctggaatctgatcgga
gacattcgccagtccaacaaaactctggaccaggtgaggaacagcgtgctgaacatttcc
acaggagctgcagctaatgacagactgaagtactacaactacactgcgcaccggctacag
gctcagtttaggggctggagaaagaattatgccatgatgagtggagatacagatgtcctg
gaagaagaaactcaaaatctgctgaccgacatggaccagctcgcagaagaggagaatgaa
gtgcagaatttgggaaaccaagtggatcaagagacactgaacagctccacacgagcaaag
accctcactgctaacctgtcatcgctcaatgtcctcattgaagatatgatcagggactgg
gaattatacggtgtctatcaggagttggatcctcaagtgaagttgcagaaactggatgaa
gctgaacggatcttgggctggatgagaaaactgaacctgtcacccaaagaaccgcttgct
acagatgagtcctccgaggcgcatgagttgctcagacgggtgcgcagctttgacagaaat
ctgatgactacacagggccgtctgccacctatgcaggaagttctgggtcggtttacttct
aaactccttcaagctcaggatctccttagcagagctgaagacgcactgaaacaggccatc
cacaaatacaagagcaaccagctcaaactacagaggagagaggcacagcagcaacgtctg
aaagacatccaggacggcgtcgatcaaacaattgttgatgctacggcagttctctctgag
gcaaatcacactgttcttgaggtggaagacgtgatcacgaatgtgagagaacagcatgca
gaaattgacggagcccgtgtcttactggagagaaggacagagaagatatctcagtcagac
agagaactagttctgcgagccgaggatcatgccgatcaactgcagagacacgctgaagag
ctgcagcataatctgaaaggaagcgatgcgaacggacatgtgcagaaagccctgaacgcc
ttcaacgtgtacgacaatattgtcaagagcgtagacgatgctaacatcactagcctgacc
gccctcaacatctccagcaggactcacggtgcggtcgataagctaagctctcagctggac
ctcatgcgctctcagagtgcaaaagtgttgaatgaagcatcgtctctacactttcagcag
caagacagtgaatctatcgtactcgacaataagaaatacattgaagagaccaatgaaatg
atggacggctcctctaaaaaaatagctaagattatcacggagatcaatgcaattcacaca
gatcgtaccccgaagcgtctgcagttcactcaggaagtggctgagggcactctgaaccgc
tccgctgaggtgttggagaaagtgactcccattctgaagagagtggagcagtgggacggc
aacatgaagagtgaagcctattctgctgcagcgttcgaccgcactgttctgtctgctggc
gaggcggtgaaggacctgtcagccattgtgccagagctgctcagcaagctgcgtgtggtt
gaggagaaaaaacctgtgaataacgtcaccacgaacatcatgaaaatcagagagctcatc
gcacaggcccgcagcgttgcaaagaaggtgcaagtgtccatgaagtttgatggccagtct
gctgtagaagttcatccccacaccaacctggacgagctgaagacggtgacgtccattagt
ttctacatccgagtagacccagataaagaccccatagaggatcgcttcttgctttacctc
ggagacaaacaaggaaagagggactacatgggactcgccataaagaacgataatctggtg
tacgtctacaaactgggtgaagaggaagtggagattccactcagctccaagccagtcagc
tcctggcctcctgtcttcaaccttgttaaagtggagaggctgggacgccatggcaaagtg
ttcctgacggttcccagtcaagacaccacagccgagcagaagttcatccagaaaggagag
ccagacgggacagactcgctgtttgacctggaccctaaagacatggtgttcatagttgga
ggagtgcctcctggtgtcacggttcctccgattttgagcctggctcctttcgttggctgc
attgagttagagaccctgaataatgatgtcatcagtttgtacaactttaagcaacttcac
aaaatggatgttaaggcatcggtgccttgtcccaggcacaagctggctttctctcagagt
cgtgtcaccagttatttgtttgacggcaccggctacgctttagtcaacaacattgagagg
cgaggaaagattggcgtcgtcactcgatttgatattgaagttcgaactgttgctaacaac
ggcatcctcttcctcatggtgaatgagaccaatttctttgtgctggagctgaaaaatggc
tttctccgtctgatgtacgactttggttttgctaacggtcctgtcatcatagagactaac
ttagccaaactgcagatcaatgacgctcgctatcacgaggtgtctgtgatctatcatcat
tcaaagaagatcattttgttggtggacagaagccatgtcaagtcctttgaaagtgaaaag
aaacccctacccttttctgatatctatataggaggagctccttcgagaattctgcagtct
aggccagagctgacatccttgattggattgaagggttgtgtaaaaggcttccagttccag
aaaaaggatttcaacctcttggaggagcaaggaactattggtatcagcagcggctgtcct
gaggaatcgtttatgtcccataaggcgtatttcactggcaatggttacctgagctcttca
gataaaatctctccattccaatcatttgaaggaggactgagcttcaaaacactacaaccc
agcgggctcctgttctaccacagagatgggtcggatgagttttctctttctctggagaac
ggtgctgtggtactccaggccaaaggaactagagtgaaatcccagaagaagcattacaat
gatggccgctctcatttcttagtcgcctctgtcaccaatcagaaatatgaaattgtcatt
gatgacaaagacaagcaggataagaagaagccgtcttccacgtctcagtcagacaacact
ccaaaggccttctactatggaggctctacatccagttccatactcaatttcactgggtgc
atcagttatgcctacatcagcaggcaggacagagatatagagccagaagatttccagcgc
tacagtgagaatgtgcaggcttcgctacaggactgcccgattgaaagacccccgtctgct
ctgctcaaagacagcagagactcctctagaagaagtgcagggcactcccgcaaggtgggc
agggatgagtccggcctgccacatggcctgaagagcaatcctctgaacattccagagaaa
gaggaggcgtcctgttacctgtcgtcccgcccacgagcaaccccccatgcaaatcactat
ggtggatctgcccacagcagacatgagtacacgggcatcgccagtgccatcaaacacgaa
tctcacttctctctgtctctgaaaacccgttcagcgtttggtctgatcttctacctcgcc
gacacgtctggggagaacttaatggctctgttccttactcatgcaagactggtattcacg
ttcagctcgggccaaagccaagtcagaatccgatccaaggagaagtacaatgatggacag
tggcatgatattatctttatcagagctggaaatatgggcagaatgctaatcgatggtctt
acggtattagaggacagagctccaggcagaaacacctcgctgcttgtccaagaccctctc
tatgttggcggagtcccacctcatcaggccatgaaaaacattcagaggacatctgtgtcg
agtttcactggctgtgtgcggagtctccagctgaatggccgctcgctcacctctgcctcc
cacagttttggggtcaccccctgctacgagggcccctcggaaccggggacgtacttcgct
gaggagggaggatatgtgctgctggatgactcctttcatttcggctcaagctttaagatg
gcgatggaggttcgcccccgtgtggcttcaggggtgctactgcatgtcttcatggagcag
aaggaatatctcaccgtgtacatctaccagagccaggtggtggttgtggtgaataatggt
atcgcggagttctccacccacgtctctcccacacaagaaatctgtgatggaaactggcac
aagatcacagtgatcagagatggtagcgtgcttcagctggatgtggactcagaggtgaat
cacgttgtggggtctgtcagtgacgcagcccagagcagcagttcgccagtgtttatcggt
ggagctccagactccatgctgtcccacagtctgctcagcaggagaggcttcacgggctgc
atgaggagcatgtctgtaaacgagacccctgtgagcttcagcaaagctgcgctggtcagt
ggatcagtcggggtgggcgcctgtccttctgcttga

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