Danio rerio (zebrafish): 567105
Help
Entry
567105 CDS
T01004
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
567105 (taf1a)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
567105 (taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
Motif
Other DBs
NCBI-GeneID:
567105
NCBI-ProteinID:
NP_001038739
ZFIN:
ZDB-GENE-041014-272
Ensembl:
ENSDARG00000052471
UniProt:
Q1JQ67
LinkDB
All DBs
Position
20:51813413..51874287
Genome browser
AA seq
448 aa
AA seq
DB search
MDDIEAELNIAETHADFTQDESEHRQRLKRPVQLHCQVKDRGFFTGIYFLKCNRKCLELL
REAMLHHRWQEAVGYFSSYIQTLEAKTYNSYQSVVAEILWRLGTEILHHLPNTSNEDFNA
LYEQLKNVGVLNFSKISLEHCYHLLLNGQMDEAKRQLSIAESWRYGRVSRSQSLSKTLIT
AYCGLLDYLIWNEKKSSVSENEELSSNHEMHSYFRQASVTLKDIISLPGIWDPFVLSYVN
MLEFYKQEESALQALENYAYNKEFPSNPNAHVYLYQFLKRHDAPREKLISTLRILHSLVP
SHELMLELCNLLLGTLERSDTEEALAVCMDLLEFSSWKTDIRAWDCLLTILKKIRKKKWQ
EIIQKEWKVRRSLWVPLHFRDFLSLKDWMDNHKLMMIIKKDCLRIINENMREYCRVAAIA
EKEVLLQIRMKRKKKQHKIQTAITELTN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggatgacatcgaagctgagctcaacattgcagaaacacacgcggattttacacaagat
gaaagtgaacatcggcaacggctgaaaagaccagtccagcttcactgtcaagttaaagac
cgaggttttttcacagggatctactttctgaagtgcaacagaaagtgtctggagctgctg
agagaagcgatgctgcatcatcggtggcaggaggctgtgggatatttcagctcttacatt
cagacactggaggccaaaacatacaatagttatcagtctgtggttgcggagatcttgtgg
agattgggcacagaaatcctgcatcatctcccaaacactagcaatgaagatttcaacgct
ttatatgaacagctgaagaacgtcggggtcctcaacttctcaaagattagtctggagcac
tgctatcatctcctgctgaacggacagatggatgaagccaaacggcagctttccatcgca
gagagctggagatacggaagggtatcccgatctcaatcactgagcaaaacgctgatcaca
gcctactgcggcttactggattacttgatctggaacgagaagaagtcctctgtgtctgaa
aacgaggagctgagcagtaatcatgagatgcacagttacttcagacaggcgtcagtgact
ctgaaggacatcatcagtctgcctggaatctgggacccatttgtgctgagctacgttaat
atgttggagttttataagcaggaggagagcgctctacaggctttggagaattacgcatac
aacaaggagtttccatcgaacccaaacgctcatgtttatctgtaccagttcctgaagaga
cacgacgctccaagggaaaagctcatcagcacattgaggattctgcactctttagtcccg
agtcatgagctgatgctggagctctgcaatctcctgctgggtacattggaaaggagtgac
actgaagaagctctcgctgtttgtatggaccttctggagttttccagctggaaaactgat
attagggcttgggactgcctattgacaattttgaagaaaattagaaagaagaagtggcag
gagattatacagaaggagtggaaggtgcggcgttcgctctgggtacctttacacttcaga
gacttcctcagcctcaaagactggatggacaaccataaacttatgatgatcatcaagaag
gactgtctgaggatcatcaatgaaaacatgagagaatactgtcgagtcgctgcaatcgct
gagaaagaagtcctcctgcagataagaatgaaacgaaaaaagaagcagcacaaaatacag
acggccattactgaactgacaaactga
DBGET
integrated database retrieval system
