KEGG   Danio rerio (zebrafish): 567175
Entry
567175            CDS       T01004                                 
Symbol
itga11b
Name
(RefSeq) integrin alpha-11 isoform X2
  KO
K06587  integrin alpha 11
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04510  Focal adhesion
dre04512  ECM-receptor interaction
dre04810  Regulation of actin cytoskeleton
dre04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    567175 (itga11b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    567175 (itga11b)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    567175 (itga11b)
   04810 Regulation of actin cytoskeleton
    567175 (itga11b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:dre04515]
    567175 (itga11b)
Cell adhesion molecules [BR:dre04515]
 Integrins
  Integrin alpha subunits
   567175 (itga11b)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_1 Integrin_A_Ig_2 VWA_2 FG-GAP_3 EIF3I
Other DBs
NCBI-GeneID: 567175
NCBI-ProteinID: XP_073798608
ZFIN: ZDB-GENE-071009-4
Ensembl: ENSDARG00000007950
LinkDB
Position
25:complement(1738521..1823705)
AA seq 1081 aa
MRLGMTLATNPKDNSFVACGPLWSYECGSSYYSTGICSRVDSNFNFTHSIAPAYQRCETY
MDIVIVLDGSNSIYPWYEVQDFLINVLQKFYIGPGQIQVGVVQYGERVVNEFRLDDFRTV
DEVVAAAKNIDQRGGEETRTALGINVARTQAFKHGGRPDAKKVMIVITDGESHDSPDLKA
AVEESEKDNITLYGIAVLGYYNRRGINPEAFLREIKFIATDPDEHFFSVTDESALKDIVD
ALGEKIFSLEGTNQNGTAFGLQMSQAGFSSHIVEDGILVGAVGAYDWNGAVLKETRHGKV
IPPKSSYMKEFPEELKNHGAYLGYMVSSVVSAHHGQLYVAGAPRFNHTGKVVIFTLTNSG
NLTILYSLYGKQIGSYYGSELAPIDVDDDGLTDLLLVGAPMYFYRGWEKGKVYIYTVGLQ
GSFIPDGTLGPSEHSHDSRFGAAMSALPDLNGDGFSELVVGAPLEDNHRGAIYLFYGLKN
SIQTKYKQRISGIELAPGLRYFGRSVHGMMDLNGDGLVDLSVGSFGAAVLLWSRSVVRVG
IGVHFEPSKINVFNKDCIRGGREVSCMLATVCLNVTARTPMTDPKRVALRYSFGFEETGY
FPRAVLDSTEESRDVTLRPAAQHCQQLHFHVHEVTDYTRPLTFTVNVGLQRADEGPVLDD
GWPTSLRSELPFWNGCDNDDQCVPNLILQSSSDLLDLREFCSRDERSSWPPCVDQSSIKT
PERLVESSRRKVVVETHLENRGENAYNSILHITHSPNLHFSSLVVKAPSDIAIECPNSDD
TSLYRTCNVSAPFMRASAQVYFRLEFEFSRSVFLNYVNISLRVSSEGEEMFPEDNINNIH
HNLRYEADILFTRDSSPSRFEIKPEQAHSVSVGSGPPFNLSYQIQNLGLFPVSELLFTLN
VFAVTRKANTLLHLSDLYIQQMPGSLCSFPRVITAGSSSQEEDLSLNAHMNASTSDALLA
QCRFNLSPQADVSITVTGWLNLHTLLAVKFKRLDLVMTATVELSPSNPMFLHEERPMRHI
ILEIRKEEDYRIPVWVIIGSTLGGLQLLALLVLALWKLGFFHRQKRKRDEQEANEKTAED
R
NT seq 3246 nt   +upstreamnt  +downstreamnt
atgaggttgggaatgactctggctacaaacccaaaggataacagctttgtggcgtgtggg
ccgctgtggtcatatgagtgtggaagttcctactacagcaccggcatctgttcaagagtc
gacagcaacttcaacttcacccatagcatcgctccagcctatcagagatgcgagacctac
atggacatagtgattgtgttagacgggtcgaactccatctacccctggtacgaggttcaa
gatttcctgatcaatgtgctacagaagttttacatcggtccaggacagatccaggtaggg
gtcgtccagtatggtgaaagagtcgtgaacgaatttcgactggatgatttccgtacagtc
gacgaggttgtggcagcagctaaaaatatcgaccagcgaggcggagaggaaacacggact
gctctcgggattaatgtggctcgaactcaagcatttaaacacggaggtcgtccagatgct
aaaaaagtcatgattgtcatcacggatggagaatcgcacgacagtccagacctgaaggca
gccgtggaggaaagtgagaaggataatatcaccctgtacggcattgcggttcttggctac
tataatcgacgagggatcaatcctgaagcttttctgagggaaatcaagttcatcgccacc
gatccagacgagcacttcttcagcgtcacagacgagtctgctctgaaggatatcgtcgac
gctctgggagagaaaatcttcagtttggagggcaccaaccagaatggtacagcttttggt
ttgcagatgtctcaagccggattctcttcgcatatcgtagaggacgggatactggttggt
gcagttggcgcttacgactggaatggagcggttctgaaagagacccgtcatggtaaagtc
atcccaccaaagtcttcttatatgaaagagttcccagaggagctgaagaaccacggagcg
tatctggggtatatggtgtcgtcggtggtctctgctcatcacggtcagctgtacgtcgct
ggagcgccccgattcaaccacacagggaaagtggtcattttcactctgaccaacagcgga
aacctcaccatactctattctctctacgggaagcagatcgggtcgtattatggaagtgaa
ctggcaccgatcgacgtggatgacgacggattaacggatcttttactggtcggagctcca
atgtacttctatagaggatgggagaaaggaaaagtttatatctacaccgtaggtttacag
ggctcttttataccagatgggactcttggtccgtcagaacattcccatgattctcggttt
ggggcggccatgtcggctcttccggatctgaacggtgacggtttcagcgagctggtagtc
ggtgcaccattggaggacaaccacagaggagccatttacctcttctacgggctgaaaaac
agcatacaaaccaaatataaacagaggatatcgggcattgagctggctccaggactgcgt
tatttcggtcgcagtgttcacgggatgatggatctgaatggagacgggctcgtagatctg
tctgtgggctcttttggggccgcagttctgctctggtcccgcagtgtcgtccgtgttggg
atcggcgttcattttgagccctcaaaaatcaacgtttttaataaggactgcattcgagga
ggtcgtgaggtgtcgtgtatgctggccacggtttgcctgaacgtcacagcgaggacgccg
atgacggatccaaaaagagtcgcgctgaggtacagctttggttttgaggagactggctat
ttcccccgagccgtgttggacagcacagaagagagcagagatgtcacactgcggcccgca
gcgcaacactgccaacaactccacttccacgttcatgaagtgacagactacacgcgacct
ctgaccttcactgtaaatgtaggcctgcagagagcagatgaaggaccggtgctggacgac
ggctggccaacaagcctgcggtcagagcttcctttctggaacggctgtgataatgacgat
cagtgcgttcccaacctcatcctgcagagcagctccgacttattagatctcagggagttc
tgcagccgtgatgagcgctcctcgtggccgccgtgtgtcgatcagagctccataaagacc
cctgagcgtttggtagagtccagcaggaggaaagtagtggtggagacgcacttggagaac
agaggagagaacgcgtacaactccatcctgcacatcacacactctccaaacctgcacttc
tccagtctggtggtgaaggcaccttcagacattgcgatcgagtgcccgaactctgacgat
acaagtctctaccgaacctgcaacgtcagcgcaccattcatgagggccagcgctcaggtc
tattttcgcctggagtttgagttcagcagatctgtcttcttaaactacgtcaacatctca
ctgagggtctccagtgaaggtgaagagatgtttccagaggataacatcaataacattcat
cataatctgagatatgaggctgatattctcttcacaagagactccagtccgtcccgcttt
gagatcaaacctgaacaggctcacagcgtctctgtcgggtctggacctccgtttaacctc
tcttatcagatccagaatcttggcctgttccccgtctctgagcttctcttcacattaaac
gtcttcgccgtgaccagaaaagcaaacactcttttgcacctctcagacctgtatatccag
cagatgccgggatcgctctgcagttttccacgtgtcatcaccgccggctcctcctcacag
gaagaagatctttccctcaatgcacacatgaacgcctccaccagtgacgcattattagca
cagtgccgattcaacctgtctccacaagcagacgttagcatcaccgtcacaggatggctc
aatcttcacactttattagccgtgaagtttaagcgtttggatctggtaatgacggccaca
gttgaattgagcccttcaaacccaatgtttctccatgaggaacggcccatgagacacatt
atcctggagattagaaaggaggaagattaccggatccccgtctgggtgatcatcggcagc
actcttggaggactgcagcttctggccctgctggtgctggccctctggaagctcggcttc
ttccacaggcaaaagagaaagagagacgagcaggaagccaatgagaaaacagcagaggat
cggtaa

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