Danio rerio (zebrafish): 567180
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Entry
567180 CDS
T01004
Symbol
arhgef16
Name
(RefSeq) rho guanine nucleotide exchange factor 16
KO
K20688
Rho guanine nucleotide exchange factor 16
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
567180 (arhgef16)
Membrane trafficking [BR:
dre04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
567180 (arhgef16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
RHG20_PH
SH3_9
SH3_1
PH_10
ECT2_PH
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
567180
NCBI-ProteinID:
NP_001116755
ZFIN:
ZDB-GENE-081104-446
Ensembl:
ENSDARG00000077114
UniProt:
B0S4U0
LinkDB
All DBs
Position
8:47098992..47143911
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AA seq
606 aa
AA seq
DB search
MSHRKSDGSTYDQSLLIPESRFNTVLQLDQSSGKSASSINLSRLDSPEDERRTVVLSTQS
EAARKRGTQQLIPKSLAVTSRPKNRHHTTVVTLPVPLQASEIGWEDYDSDAGDGVSLRRN
RRNKSYRAAITSLHLDGELQPESLSPRTLGRIRNRKHAGSFKDEPRFYQEIKERGLNVSS
LSTEEEELSPVGPPGEDQGIVVKNYRAAYITWSQLPQVKDLGILDFITPEERKRQEVIFE
IITSEYSYQHSLSILVRHFKDSVDLRKTMTATEHHHLFSNISVIQDVSKRFFEDLDKRHQ
ANPVIERISDIVATYATKHFEPYIVYCSNETFQQRTLQKLLSSNSAFRETLKQIETSEDC
GGLPMLSFLILPMQRVTRLPLLMDTICEKTTKETAEYYKACWAFKAISKLVKSCNDGARR
MERTEQMYTIQKQMEFGKIKPFPLVSSSRWLKKSGELAVYTDDLSIFRKAFSFKSYYLFL
FNDVLIVTKKKSEESYVVLDYATVEKVEVEEEMSDSKLNLKLMMNPNSDGRSEQLVLVAE
NKLVRAQWVTALRDVKQTSSIDNDDLPQYEATKAYLPKAPDELSLQQAEVVIVIQEVEGV
GVMESA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacagaaagtctgatggctccacatatgaccagtctcttcttattccggagagc
cgcttcaacacagtccttcagctggaccagtcgtctggaaagtcagcatccagcatcaac
ctgtccagattggattctcctgaggatgagcgcaggacggtagtgctcagcacgcagagc
gaagcagcccgaaagcggggcactcagcagctcattccaaaaagcctggcagtgaccagc
cgcccaaaaaaccgccaccacaccactgtagtgaccctacccgtgcccctacaggcctcg
gaaatcggctgggaggactatgacagtgatgcaggtgatggcgtttcactcaggagaaat
cgcaggaataaatcatatcgcgctgcgatcactagtctgcatctcgacggtgaacttcaa
ccagaaagtctttcgccgagaacattaggaaggatcaggaacagaaagcatgccggctct
tttaaagatgagccacggttttatcaggaaatcaaggaacgaggccttaacgtcagcagc
ttgagcacagaggaagaggagctttcaccggtggggccaccaggggaagatcagggcata
gtggtgaagaactacagggcagcgtacatcacatggagtcagctaccacaggtgaaggat
ttgggtattttggatttcatcacacctgaagagcgcaaaagacaagaagtcatctttgaa
atcatcacgtcagaatattcctaccagcacagtttgagcatcctggtgcgtcatttcaag
gacagcgtggatctgagaaagaccatgactgcaacagagcaccatcacctgttctccaac
atatccgtcatccaggatgtcagcaaacggttttttgaagatctggataagcgtcaccaa
gcaaaccctgtgatcgagcgcatcagtgatatagtggcaacttacgcaactaagcacttt
gagccatacatcgtgtactgctccaacgagaccttccagcagagaaccctccagaaacta
ctgtcgagtaacagtgcgtttcgagagactctgaagcagatcgaaaccagtgaggattgt
ggaggtttacccatgctctccttcctcatcttacccatgcagagagtcacccgtctgccg
cttctgatggataccatctgtgagaagaccactaaagagacggctgaatattataaagcc
tgctgggcttttaaagctatcagtaagctggtgaagagctgtaatgatggagctcggagg
atggagcggacagagcaaatgtacaccatccagaaacagatggagtttggcaaaatcaag
cctttccctctggtgtcgtcttctcgctggctgaagaaaagcggtgagctggctgtgtac
accgatgatctcagcattttccggaaggccttcagcttcaagagctactacctgttcctc
ttcaatgatgtgctcatcgtcaccaagaaaaagagtgaggagagttatgtggtgttggac
tacgccactgtggagaaggtggaggtggaggaggaaatgagcgactccaaactcaatctt
aaactgatgatgaatcccaacagtgacggccgcagtgaacagttagtactagttgcagaa
aacaagctggtcagagcgcagtgggtcacagctcttcgagatgtcaagcaaaccagcagc
atcgataatgacgatttgcctcagtatgaagctaccaaagcctacctgccaaaagcgcca
gacgagctgagcctgcagcaggctgaagtggtcatcgttatacaggaagtggaaggtgtt
ggtgttatggagagcgcatga
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