Danio rerio (zebrafish): 567237
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Entry
567237 CDS
T01004
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dre02000
]
567237 (tmc1)
03037 Cilium and associated proteins [BR:
dre03037
]
567237 (tmc1)
Transporters [BR:
dre02000
]
Other transporters
Pores ion channels [TC:
1
]
567237 (tmc1)
Cilium and associated proteins [BR:
dre03037
]
Other cilia and associated proteins
Stereociliary proteins
567237 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
COX16
Motif
Other DBs
NCBI-GeneID:
567237
NCBI-ProteinID:
XP_021331962
ZFIN:
ZDB-GENE-060526-261
Ensembl:
ENSDARG00000056386
UniProt:
A0A8M9PKH1
LinkDB
All DBs
Position
5:complement(26269244..26305756)
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AA seq
986 aa
AA seq
DB search
METFNRKENHQEDLFLALFSQAMVYCCDIIIITHTHTQAHGQPHARLLRRRMPRHKLIAS
ESDVSIEVDEGKDKESCVYYVEVEENCERGKIKQASRDGKRRRERNGETRRKASEKRTNE
GESKKAEKKHEKGHRTARKAVEKHGKRQRRKNADEEDAEDKSSTEKKNMKNEKNKTLKLE
EEKEKDVRKKKRKHVKNEEDETNHEKTKQHLKEEKRRKKRKKPETTSESESKSESESASE
SESKNSPAVGVLGSLTPEELENLKEAVEERKKLITQLKGKPWPMRRKLVVLRESQEFVEK
YEGALGKGKGRKLYAYKVMMMKKWMKFQRDFENFKTACIPWEMKIKEIESHFGSSVASYF
IFLRWMYGINMILFGLTFGLVMVPEALMGKPYGSLPRKTVPREEEASAMNFAVLWDFGGY
AKYSVLFYGYYNSQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANEEGGGDDT
SFNFSWKTFTSWDYLIGNPETADNKFASITTSFKEAIVEEQESRKDDNIHLTRFLRVLAN
FLVLCCLAGSGYLIYFVVRRSQKFALEGLENYGWWERNEVNMVMSLLGMFCPMLFDVIST
LENYHPRIALQWQLGRIFALFLGNLYTFIIALMDAIQLKRAEEEIVKKNMTIWQANLYNG
TVPDNSTAPPLTVHPADVPRGPCWETMVGQEFVRLIISDTMTTYITLLIGDFMRAVLVRF
LNNCWCWDLEYGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNLLRLHVSMYLQ
CWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVSIPPSFDCGPFSGKPR
MFDVIQETLETDFPAWFSKVFSYASNPGLVLPFLLLLVLAIYYLQSTSKTYKRVNMELKK
KLQAQNEENKKKNKLAALKAASDLEQARKAGEQRRNSISDLGVNEENPESHVSSSHTSRP
PASRGHTSSGHLPGHPQQPQKNLKKR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggagacgtttaataggaaagagaatcatcaagaagacttgttcctggctctgttcagt
caggccatggtctactgctgcgacatcatcatcatcacgcacacacacacacaggcacac
ggtcaaccacatgcaaggctactcaggagaaggatgccacggcataaactcatcgcatct
gaaagtgacgtgagcattgaggtggatgaaggaaaggacaaagaatcctgtgtttattat
gtggaagtggaggaaaattgtgagagaggcaagataaagcaggctagtcgagatggcaaa
cgaaggagggagagaaatggtgaaactaggagaaaagcttcagagaaaagaacaaacgag
ggggaaagtaaaaaagcagaaaagaagcatgagaaaggccacagaactgcaaggaaagca
gtagagaaacatggaaaaaggcaaagacgaaagaatgcagatgaagaggatgctgaggat
aaatccagcacagagaaaaagaacatgaaaaatgaaaaaaacaagactttaaaactggag
gaggagaaggagaaggatgtgaggaaaaagaaaaggaaacatgttaaaaatgaagaggac
gagacaaatcatgaaaagacaaaacagcatttgaaggaagaaaagagaagaaagaaaaga
aagaagccagagactacctcagagtcggagtctaaatctgagtctgaatctgcttctgaa
tctgagtcaaagaacagtccggcagtgggagttttgggttctctgactccagaggagctg
gaaaatttaaaagaagctgtggaggaaagaaaaaagctcatcacacaactaaaaggaaaa
ccctggcccatgagaaggaaactagtggtcctcagggagtcgcaggagtttgtggagaaa
tatgaaggtgctttggggaaaggcaaaggcaggaaactttatgcctacaaggtcatgatg
atgaagaaatggatgaagtttcagcgtgattttgagaacttcaagactgcctgcatcccg
tgggagatgaagataaaagaaatcgaaagccattttggctcttcggtggcttcatacttc
atattcttgaggtggatgtatggcatcaatatgattttgtttggactaacatttgggctg
gtcatggttccagaggctcttatgggaaaaccatatggcagtttaccaaggaaaacagtg
cccagagaggaagaggccagtgctatgaattttgcagtcttatgggattttgggggctat
gctaagtactctgtcctcttctatggctactataacagccagcgggccattgggtggctg
aagtttcgcatgccactgtcctacttcctggttggagtgggcacagtggcctacagctac
atggtggtgatcaggaccatggcccgcaacgcaaatgaagaaggtggcggagatgatacc
agctttaatttcagctggaagacattcacaagctgggattaccttattggaaaccctgag
acagcagacaacaagtttgcttccatcaccaccagctttaaggaggctattgtggaggag
caagagagcagaaaagatgacaacatccacctgacaagattcctcagagtgctggccaac
ttcctggtgctctgctgtctggcagggagcgggtacttgatctactttgtagtacgcagg
tctcagaagtttgcactggagggcctggagaactacggctggtgggagagaaatgaggtc
aacatggtgatgtctctgttgggaatgttctgcccgatgctgttcgatgtgatcagcact
ttggagaactatcacccacgcattgccctccagtggcagctgggacgcatctttgctctt
tttttggggaacctgtacacttttatcatcgccctcatggatgccatccaactaaagagg
gcagaagaggagattgtgaagaagaatatgacaatctggcaggccaacttgtacaatggg
actgtgccagacaactcgactgctcctccgctcactgtgcaccctgctgatgttcccaga
gggccttgctgggagaccatggtgggacaggagtttgttcgtcttatcatttctgacaca
atgacgacttacatcactctgctgattggggatttcatgcgtgccgtactggtgcgattc
ctgaacaactgctggtgctgggatctggagtatggctttccatcctactcagagtttgat
gttagtgggaatgttctggggctgatctttaaccagggaatgatctggatgggtgcattc
tacgctccatgtcttccagcactaaatcttcttcgtcttcacgtgtctatgtacctgcag
tgttgggcagtgatgtgctgtaatgtgcctcaggaacgcgtcttcaaagcttcaggctcc
aataacttctacatggccatgcttctggtcattctttttctctctacattaccagccata
tacaccattgtctccattcctccctccttcgactgcgggcccttcagtgggaaaccccgc
atgtttgatgtgatccaggagactctggagacagatttccctgcctggttcagtaaagtg
ttcagttatgcctcaaaccccggtctggtgctgccgtttcttcttcttttggttctcgca
atatattacctgcagtccacttcgaaaacgtataaaagagtaaacatggagctgaaaaag
aaacttcaagcacaaaatgaggaaaacaagaaaaagaacaaacttgcagccttaaaagca
gccagtgacttggagcaggcaagaaaagctggagagcaacgcagaaacagcatctcagat
ttgggagtgaatgaagagaatcctgaatctcacgtctcctcatcccacacatccagaccc
cctgcgtcccgtggccacacatcatctggacatcttccaggtcacccgcagcagccacag
aaaaatttaaagaagagataa
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