Danio rerio (zebrafish): 567293
Help
Entry
567293 CDS
T01004
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a precursor
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
567293 (lingo3a)
Membrane trafficking [BR:
dre04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
567293 (lingo3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_LRWD1
LRR_14
Ig_2
LRRNT
Cupin_1
V-set
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
567293
NCBI-ProteinID:
NP_001076323
ZFIN:
ZDB-GENE-060503-54
Ensembl:
ENSDARG00000061970
UniProt:
A0AB40EA02
LinkDB
All DBs
Position
22:complement(20571830..20635881)
Genome browser
AA seq
605 aa
AA seq
DB search
MAGCPHLSLSGLLVLLITASITHGQSCPQRCDCIPHQRAVMCQNKRLGSIPGGIPADTRL
LDLSCNSLRWVEYNDLSTLLRLEELDLSENLISVLEPNAFSSLLNLRVLRLRANQLKLVP
MGAFSRLTNLTTLDLSGNKLVILLDFTFQDLRNLRNLEVGDNDLVYISNKAFLGLVGLRE
LTIERCNLTSISGQSLSYLRGLVTLRLRYLSIASLEEQNFRKLGGLRGLEIDHWPFLEYI
SPHSFQGLNLSWLSITNTNISTVPTGALRNLIHLASLNLSYNPISVLESWALRDLVRLKE
LHLVGTNLISVQPYGLGGLQQIRLLNLSNNGLVTLEEGSFHSVNTLETLRVDGNPLSCDC
RLLWILQRRKTLNFDGKSPVCTAPVEVRGKSLSTFTDSALFDHFTCQRPKIRNRKLQQLT
AREGQVVSFVCRAEGDPTPVIFWISPQRRRITTKSTGRVIVLPEGTLEIRYAQVTDTGTY
ICIASNAGGNDTYFATLTVSGLPLDSALSANRTYYVGDLNDTNLNDTRVFLKFTLDLKTI
LVSTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQGGARKF
NMKMI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttgtccacacctgagtttatcagggctgcttgtgctcctaatcactgcatcc
ataacacatggccagagctgcccacagcgctgtgactgtatccctcaccagagagcagtg
atgtgccagaacaagcgcctgggatctattcctgggggcatcccggctgacacacggctg
ctggatttgagctgcaacagtttgcgctgggtggagtacaatgacttgtcgacactcttg
agacttgaggagctagacctgagcgagaatctcatcagtgtgttggagcctaacgccttc
tccagcttgcttaaccttagagtattgcgtcttagagccaaccagcttaaactcgtgccc
atgggtgccttttcacgtctcaccaacctcacaactctggacctaagtgggaataaacta
gtaatcctgttagacttcacctttcaggacttgaggaacctccgcaatttggaggttggt
gataatgacctggtgtacatttccaacaaagctttcctgggattggtgggactgcgggag
ttaaccattgagaggtgtaatctgacttccataagtggacagtctctttcctaccttcgt
ggcttggtgactcttcgattacgctacctcagtatcgcttcgttagaagagcagaacttt
cgcaaattgggtggactacggggtcttgagattgaccactggccattccttgagtacatc
tctccacacagcttccaaggtctcaacctttcctggctttcgattaccaacaccaacatt
tccaccgtgcctactggtgctcttcgcaacctaattcacttggctagcctcaatctgtcc
tacaatcccatctcggttcttgagtcctgggccttgcgggaccttgttcgattgaaagaa
ctgcatctagttggtacaaatctgatctccgtgcaaccctacggtcttggaggtctgcaa
cagatacgattgcttaacttatcaaacaacggattagtgaccctggaggaaggatccttc
cactccgtcaacacactggagacgctgcgtgtagatggcaaccctttgtcctgtgactgc
cgcctactgtggattctgcagcgcaggaagaccctcaattttgatggaaagtcacccgtt
tgcactgcacccgtagaagtgcgaggaaaatcgcttagtacattcacagactctgcactt
tttgaccacttcacctgccagaggcccaaaatccgcaatcgcaagcttcaacagctgaca
gcacgtgaaggccaggttgtgtcgtttgtatgtagagctgaaggagacccaactccggtc
atcttttggatttcacctcagcgtcgacgtatcaccacaaagagtactgggagagttatt
gtcctgcctgaaggtactctggagattcgttatgcccaggtaacagacactgggacctat
atatgcatagcaagcaatgctggtggcaacgatacctacttcgccaccctaacagtcagt
ggattgccactagatagtgctttgtctgctaatcgcacatactacgtaggtgatctcaat
gacacaaatttaaacgacacgcgtgtcttcctgaagttcacattggatctcaaaaccatt
cttgtgtccacagcaatgggttgtataatgtttttgggggtagttcttttctgtttcatt
ctcctgtttgtgtggagccgaggacgaggtcagcacaagaacaatttctcagtagagtat
tcattcagaaaggtagacggccctgctgccagcgggggtcaaggaggggcacggaaattt
aacatgaagatgatataa
DBGET
integrated database retrieval system
