Danio rerio (zebrafish): 567461
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Entry
567461 CDS
T01004
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
567461 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
567461 (u2surp)
Spliceosome [BR:
dre03041
]
Complex A
U2 snRNP components
U2 related factors
567461 (u2surp)
Complex B
567461 (u2surp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
RRM_7
SET_assoc
Motif
Other DBs
NCBI-GeneID:
567461
NCBI-ProteinID:
NP_001184003
ZFIN:
ZDB-GENE-070912-400
Ensembl:
ENSDARG00000061490
UniProt:
E9QCG7
LinkDB
All DBs
Position
2:complement(29962370..29981863)
Genome browser
AA seq
968 aa
AA seq
DB search
MADKTPGGAQKGNSKALLESKLKAFSIGKMAVAKRTLSKKEQDEIKKKEDERAAAEIYEE
FLAAFEGGEGKVKTFVRGGIANATKEEAAADEKKGKLYKPKSRIVEAKSFLPLETPQQFL
PIDKRNASKKGDKEKKKSNLELFKEELKQIQEERDERHRLKGRVSRFEPLPTTEGRRSSD
GSSRRNRPSSVLDDSAPGSHDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIM
WPRTDEERARERNCGFVAFMTRRDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIP
PSMMEHTLPPPPSGLPFNAQPKERLKNPNAAMPPPPKCKEEFEKTLSQAIVKVVIPTERN
LLSLIHRMIEFVVREGPMFEAMIMNREINNPLYRFLFENQSPAHVYYRWKLYTILQGESP
TKWKTEDFRMFKNGSLWRPPPLNPYLHGTPEDEEHEDDDDEEICKKGSLKDEERDKLEEL
LRGLTPRKSDIAGGMFFCLTHADAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLYNS
SAKVTNASYYRKFFETKLCQIFSDLNATYKTIQGHLQSENFKQRVMSCFRAWEEWAVYPD
PFLIKLQNIFLGLVSLDPEKEPEELVPELPEKVEDIDGAPIVEEELDGAPLDDVDGMPID
GAPIDGASMDDLDGMPIKGADDDLDGVPLDQKPGFKVAPSKWEAVDGAALEAQAVTTSKW
EIFDLPEESEKSKSSTKSEAEGKNSHKSSSAADQQSYSNPVREEYDLKSAKFSETSEEKR
AKLREIELKVMKFQDELESGKRPKKSGQSIQEQVELYRDKLLQREKEKETEKDKEKEKEK
ERKDKEKSDVFHKEKDKDESTPGRKEKKRRHSPSPSPTRSSSSRRGRSPSPRSERSDRSY
TRDSSRSAYKDSPRESNRKSSKRSPSPPRTPKRSRRSRSRTPKKASKKSRSRSRSPHRSH
KKSKKSKH
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaacgccaggtggggcccagaaaggcaactctaaggctttattggaaagt
aagttaaaggctttcagtattggcaagatggcagttgcaaaaagaacactaagtaaaaaa
gagcaagatgaaatcaagaagaaggaggatgaaagggcagctgcggagatctatgaggaa
tttcttgctgcctttgagggaggtgaaggaaaagtgaagacttttgtacgtggtgggatt
gctaatgctacgaaagaggaagcggcagccgatgagaagaaaggaaagctttacaaacca
aaatcaaggattgtggaagctaaaagttttttacctttggaaaccccacaacagttttta
ccaatagataaacgcaatgcatcgaaaaagggagacaaagaaaagaaaaagagcaacctt
gagctcttcaaagaagaactcaaacagatacaggaggagcgtgatgaacgtcacaggttg
aagggtcgagtcagtcgttttgagcctcttcccacaacggaaggaaggcgatcctcggat
ggttcttcacgaagaaaccgtccgtccagtgtcttggatgattctgctcctggctcacat
gacgttggagatccaacaacaacaaatttgtatttaggcaacataaatcctcagatgaat
gaggagatgctctgccaggagtttggtcggtatggtcccttagccagtgtgaaaatcatg
tggcctaggactgatgaggagagggccagagaaaggaactgtggctttgtagccttcatg
acgaggagagacgctgaacgtgcacttaaacatttaaatggcaaaatgataatgaacttt
gaaatgaaactgggatggggcaaaggtgtaccaattcctcctcatccaatatacattcca
ccttcaatgatggagcacacccttccgcctccaccctctggcctgcccttcaatgcccag
cccaaagagaggctaaagaaccccaacgcagccatgcctccccctccaaagtgcaaagag
gagtttgagaagactctgtcgcaagccatagtcaaagtggttatcccaacagaaaggaat
ttgctctctctcatccaccgaatgatcgagtttgtggtgcgtgagggccctatgtttgaa
gctatgatcatgaacagagaaatcaacaatccactctacaggtttttatttgaaaatcaa
agtccagcacatgtctattatcgctggaagttgtacaccattttacagggagaatctcca
acaaaatggaaaacagaagactttaggatgtttaagaacggatctctttggcgaccgcct
cctctcaacccatatttgcacggcactcctgaagatgaggagcacgaggatgacgacgac
gaagaaatctgcaagaagggttccttgaaggacgaggaaagggataaattagaggagctg
cttcggggtctcacgccgaggaagagtgacattgcaggcgggatgtttttctgcctcact
catgctgatgcggctgaggagatagtggagtgcatcgcagagtctctgtccatactcaaa
acccctctgccaaagaagattgcaaggctatatttggtgtcggatgtgctttataactca
tctgcaaaagttactaatgcctcctattacagaaaattctttgaaacaaaactatgtcag
atattttctgacctaaatgctacttataagacaatacagggccatttacaatcagaaaat
tttaagcaacgagtaatgtcctgtttccgtgcgtgggaagaatgggcagtttatcctgat
ccatttctgatcaaacttcagaacattttcttaggactggtcagtcttgatcctgaaaag
gagcctgaagagcttgtgccagagctaccagaaaaggtggaggacattgatggtgctccg
attgtggaggaggagttagatggtgctcctttggatgacgttgatgggatgcccatcgat
ggagccccaattgatggtgcatcgatggatgacctggatggaatgcccattaaaggagca
gatgatgatctggatggagttcctttggatcaaaaaccaggttttaaggttgccccatca
aaatgggaggcagtggatggtgctgctttggaggctcaagctgtaaccacgtcaaaatgg
gaaatctttgatctgccagaagaatctgagaaaagtaaatcaagcacaaaaagtgaagca
gagggcaaaaactcccacaagagctccagtgctgcggaccagcagtcctacagtaatcct
gttagagaagagtatgatttaaagtctgcaaagttttctgagacgagcgaggagaagcgt
gccaaactacgtgaaattgagcttaaagtcatgaagtttcaagatgagcttgaatctgga
aaacggcccaaaaaatctggacagagcattcaggagcaagtagagctttaccgggataag
ttactacagcgggagaaggagaaagagacggagaaagacaaagagaaagaaaaagaaaag
gagagaaaagacaaagagaaatcggacgtgttccacaaagagaaagacaaagatgaatcc
acaccgggtagaaaagaaaagaaacggaggcacagtccatcccccagcccgacacgaagc
agcagcagcagacggggcagatcaccttcgccccgatcagagcgctccgatagatcctac
acaagagacagctcacgatcagcttataaagactctccaagagaaagcaaccgcaagtca
tctaaaagatctccttcacctccaagaacccccaagaggtcgcgcagatccagatcaaga
acgcccaaaaaagcctcaaagaaatccagatcgcggtcacgatcaccccatcgctcgcac
aaaaaatccaaaaagagcaaacactga
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