Danio rerio (zebrafish): 567501
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Entry
567501 CDS
T01004
Symbol
scaf4a
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13167
SR-related and CTD-associated factor 4
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
567501 (scaf4a)
03041 Spliceosome [BR:
dre03041
]
567501 (scaf4a)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
567501 (scaf4a)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
567501 (scaf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
567501
NCBI-ProteinID:
XP_695887
ZFIN:
ZDB-GENE-030131-9003
Ensembl:
ENSDARG00000077093
UniProt:
E7F4U8
LinkDB
All DBs
Position
10:complement(30638856..30654896)
Genome browser
AA seq
1070 aa
AA seq
DB search
MDAVNAFNHELFSLMDTKPPISRAKMISITKSAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVVDSIVRQSRHQFGADKDVFGPRFTKNITGTFENLCLCPTEDRSKIVRVLNLWQKN
GVFKIEVIQPLLDMAAGSSSSSGLDNGPDAASPQSPVREQEAHPVVTTNSIVAAVPQLQN
SDAFAAVAQLIQSSQGQQLQQMLQNFQPPGKPQSPVVDNNRSHLHLQAQAIAPPSTIPHQ
HIHHAPQPVEKKATFDKTILDRFDYDDEPDAGEDAKKEEAQSVQPSMGFPEQTVPGFPPA
NQMQHFQQHMMAVSQRQQVVLPSNGQVQGFGLMTSQPYPGMMPPMGQPNAAFPPQNEAFN
QLMSGHAESLMNSDASARSAHEDKRSRSRSGSRSPKRRRSRSNSRSRRMRHRRSRSRERR
RQSPRSRSQERRDREKERERRQKGLPPVKNNTLSVCSTTLWVGQLDKRTQQQDVASILEE
FGQIDSINMIPPRGCAYIVMIHRQDAYRALQKLSRGPYKVNQKAIKIAWALNKGIKAEFK
QYWDVELGVTYVPWSKVKMEDLDVFREGGMLDSDTLAPEWRNSQIEQKTDESQNGRPEVG
KVEETQTVIPMQVPPVQPIGAVGVPPPGFPAHMNIPPPSFPPGVPPPPGPFMRPAFNPMQ
MPPGFLPPGAMPHMGAAGPPPPTAGIGMPPVGSSVENLSNDSAGLGPKISTDGADVFNSG
NQVPPGAPPGMGMQSPPGLLGTRPGMMPLQRPPGMPPPHMQRFPIPPPRAGMPPMPPQMM
PPRGPPQMMHREPPPGGFSMPPPPHGIRGPFPPPGPHFMRPSLPRPEGPNDHEARPFRGE
RPGLGRGREQDWFGGRRPFGEGRGGERPDGRERFGGWHEEPEKPGGWERERREERWRRSP
DGERGRDGGERERGRDGGERERGRDGGERERGRDGGERERGRDGGERERGRDGGERERGR
EGGERERGRDTGERERGRDGEERTKRPAGSRERSTRWDRDDRLDRLGLAGEEPNERLSAN
TNEPSANPTKELAEAKPDVPAPSAAATADSEASEPIAENKSEEQTQKEES
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgcgtttaatcacgagttgttctccttgatggacaccaagcccccc
atctcgagggccaagatgatctctatcaccaaatctgccataaaagctatcaaattatac
aagcatgttgtccagatagtggaaaagttcataaagaagtgcaaaccggagtacaaagtt
cccggtctctatgtggtggattccattgtgagacagtcacggcatcagtttggagcagat
aaagatgtgtttggacccaggtttactaaaaacatcactgggacatttgagaatctatgc
ttgtgtcccactgaagatcggagtaagatagtacgagtgctcaacctgtggcagaagaat
ggagtgtttaagatcgaggtcattcagcctctgttggacatggctgctgggtccagcagc
tcctcaggcttggacaatggcccagatgcagcttctccacagtctcccgtgagggaacag
gaggctcatcctgtggtgacgacaaactcaattgtagcagctgtgcctcagcttcagaac
tcggatgcctttgctgcagttgctcagctaattcagtcttctcaaggacagcagcttcag
cagatgctgcagaactttcagccaccagggaaacctcagtctccggtggtggacaataac
aggagtcatctccatctacaagcccaggctatagcacccccatccaccatcccacatcag
cacatccatcacgcaccgcagcctgtggaaaagaaagccaccttcgacaagacaattctt
gaccgctttgactatgacgatgagccagatgcaggagaggatgccaagaaggaggaagcg
cagtctgtccaaccttctatgggttttcctgagcaaactgtcccaggatttcctccagcc
aatcagatgcagcactttcaacagcatatgatggctgtatcacagcgccaacaggttgtt
ctaccttcaaatggacaggtccaaggctttggtctcatgacctctcagccctatccaggc
atgatgcctccaatggggcagccgaacgcagctttccctcctcaaaatgaggccttcaat
caactcatgtctggacatgcggaaagtctgatgaattcagatgcatctgcgaggtctgcc
catgaagacaagaggtcaaggtcacgctcggggtcgaggtctcctaaaagaagaaggtct
cgatccaattcccggtccagacgaatgaggcatcgacgatctcggtctcgagaacggcgg
cgtcagtcacctcgctcgcgctctcaggaaaggagagacagagaaaaggaaagagaacga
agacagaaaggcctccctcctgttaaaaataacacactcagtgtgtgcagcacaactcta
tgggtgggtcagctggataagaggacacagcagcaggacgtggcctctatactagaggag
tttggccagatagattcaattaatatgattcctccacgaggttgtgcctacatcgtcatg
attcatcgtcaagatgcctatcgagccctgcaaaaactaagcagaggtccatacaaagtc
aaccagaaagccattaagattgcctgggctctaaataagggcattaaggctgaattcaag
cagtattgggatgtggaattgggtgttacctatgttccatggtccaaggtaaagatggag
gacttggacgtattcagagaaggagggatgctggattctgacactcttgcgccagaatgg
cgaaactctcagattgaacagaagactgatgagtctcagaacggccggccagaggtggga
aaagtggaagagacccaaactgtcatacctatgcaggttcctcctgtccagccaatagga
gcagtcggtgtcccacctccgggattcccagcacacatgaacatcccaccaccctcattc
ccacctggtgttcctccacctccaggtcccttcatgcggccagcctttaaccccatgcag
atgccaccaggatttctcccaccgggtgccatgccccatatgggtgctgctggccctcct
ccacctacagcaggcatcgggatgcctccagttggcagctctgttgaaaacctgtcgaat
gattcagcaggtctgggcccaaaaatcagcactgatggagcagatgtgttcaactcagga
aaccaggtgcctcctggagctccaccagggatgggcatgcagtctcctcctggtcttctt
ggcacaaggccaggtatgatgcctcttcagcggcccccggggatgccacctccgcacatg
cagcgattccccattcccccacctcgggcaggcatgccacccatgccaccacagatgatg
ccacccaggggtccacctcagatgatgcaccgcgaacctccaccgggtggtttcagcatg
cctcctccacctcatggcatccggggaccgttcccacctcccggacctcactttatgagg
ccgagcttaccaaggcctgaggggccaaatgatcatgaggctcgaccttttagaggagaa
cgtcccggattaggaagaggccgagagcaggactggtttggaggacgacggccttttggt
gagggacgtggtggggaaagaccagatggacgtgagcggtttggaggatggcacgaggag
ccagagaaaccaggtgggtgggaaagagaacgcagggaggaacgctggaggagaagtcca
gatggagaacgaggacgtgatggtggagagagggaacgaggacgcgatggtggagagagg
gaaagaggacgcgatggtggagagagggaacgaggacgtgatggtggagagagggaacga
ggacgcgatggtggagagcgggaacgaggacgcgatggtggagagcgggaacgaggacgc
gaaggtggagagagggaacgaggacgcgatactggagagcgggaacgaggccgcgatggt
gaagaacggaccaagcggcccgcagggagcagagagaggagcacacgctgggaccgcgac
gatagactcgatcgattgggtctggccggcgaggaacccaatgagagactctcagcaaat
accaacgagcccagtgcaaaccctactaaagaacttgctgaagccaagccagatgttcca
gcaccttctgctgcagctacagcagactcggaagcttcagaacccatagcagagaacaaa
tctgaagaacaaacacaaaaagaggagtcgtag
DBGET
integrated database retrieval system
