Danio rerio (zebrafish): 567859
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Entry
567859 CDS
T01004
Symbol
colgalt1b
Name
(RefSeq) procollagen galactosyltransferase 1 precursor
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00310
Lysine degradation
dre00514
Other types of O-glycan biosynthesis
dre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
567859 (colgalt1b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
567859 (colgalt1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dre01003
]
567859 (colgalt1b)
Enzymes [BR:
dre01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
567859 (colgalt1b)
Glycosyltransferases [BR:
dre01003
]
O-Glycan biosynthesis
O-linked Gal type
567859 (colgalt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
567859
NCBI-ProteinID:
NP_001103992
ZFIN:
ZDB-GENE-070424-114
Ensembl:
ENSDARG00000058270
UniProt:
A5PMF6
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Position
1:complement(58014831..58036443)
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AA seq
604 aa
AA seq
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MHLLCFFFLLLWTGPARSYFPEERWSPESALLAPRVLVALVCRNSAHSLPHVLGAIDRLN
YPKDRMAVWVATDHNSDNTTEILREWLVNVQNFYHYVEWRPQDEPSVYEGESGPKHWTNL
RYEHVMKLRQAALETAREMWADYFMLVDCDNLLTNRDVLWKLMRENKTIVAPMLESRAAY
SNFWCGMTSQGYYKRTPAYMPIRRQERKGCFAVPMVHSTLLLDLRKEASRQLAFFPPHPD
YTWAFDDIIIFAFSARMAEVQMYICNRETYGYFPVPLRSQNSLQDEAESFLHSQLEVMVR
NPPIEPSVYLSLMPKQTDKMGFDEVFMINLLRRSDRRERMLRTLYEQEIACKIITAVDGK
ALNASQVEALGIKMLPGYSDPYHGRPLTKGELGCFLSHYNIWNEIVDRGLQSSLVIEDDL
RFEVFFKRRLQNLMQEVQSQQLDWDLIYIGRKRMQVERPEKSVPRIHSLVEADYSYWTLG
YVISLRGAQKLLRAEPLKKMLPVDEFLPVMYNKHPIEEYMSHFPQRDLRAFSAEPLLIYP
THYTGDQGYISDTETSSVWDNESVLTDWDRARSRKSREQEELSSEAQNTDVLQSPLDSTA
RDEL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgctgtgcttcttcttcctgctgctgtggaccggcccggcgcgctcttatttc
ccggaggagcgctggagcccggagtcggctcttcttgccccgcgggtgctggtcgcgctg
gtctgccgcaactccgcgcactccctgccgcatgtcctcggcgcaatcgaccgcttgaac
taccccaaagaccggatggctgtttgggtggccacagatcataactccgacaacaccacc
gagatcctgcgcgagtggctggtgaacgtgcagaacttctatcattatgtggagtggaga
cctcaggacgagcccagtgtgtatgagggtgaaagcggcccgaagcactggacgaatctg
cgatacgagcacgtgatgaagctccggcaggcggctctggagacggcacgcgagatgtgg
gccgactatttcatgttggtggactgtgataacctgctgactaatcgtgatgtgttgtgg
aaattaatgcgggaaaacaagacgattgtggcgccgatgctggaatccagagcggcatac
tccaacttctggtgcggcatgacgtctcagggttattataagcgtactccggcctacatg
ccaatccggcgtcaggagcgtaagggctgttttgcggtgccgatggttcactccacgctc
ctgttggacctgcggaaagaggcgtcccgtcagctggccttctttccgccccatcccgac
tacacctgggcctttgatgacatcattatcttcgccttctccgcacgcatggcagaggtt
cagatgtacatctgcaacagagagacgtatgggtatttcccggtgccgctgcgctcccag
aacagcctgcaggatgaggcggagagctttctgcactctcagctggaggttatggtgcgc
aatcctccaatagagccgtccgtgtatctgtcactaatgccaaaacagacggataaaatg
ggcttcgatgaggtgttcatgataaatctcctgaggcgctcagaccggcgcgagcgcatg
ttgaggacgctttacgagcaagagatcgcatgcaagatcatcacagctgtagatggcaag
gcactgaatgcaagtcaggtagaggctctggggatcaagatgctgcccggttacagtgac
ccgtatcacggacgcccgctgaccaaaggagagctgggctgctttctgtcccactacaac
atctggaacgagattgtggatcgtggcctgcagtcgtctctggtgatcgaggacgatctg
cgcttcgaggtgttctttaagcggcgtctgcagaatctgatgcaggaggttcagtctcag
cagctcgactgggatctgatttatattggccgcaagcggatgcaggtggagcgaccggag
aaatcagtgccacggatccacagtctggtggaggcagattactcgtactggacgctggga
tacgtgatctcgctccgcggtgcacagaagctgctaagagccgaaccgctcaagaagatg
ctgccggtggacgagtttctgcccgtcatgtacaacaaacaccccattgaggagtacatg
tctcatttcccacagcgggacctgcgggccttttctgcggagccactgctgatataccct
acacactacacaggagaccagggctacatcagcgacacagagacctccagcgtctgggac
aacgagagcgtgctgaccgactgggacagagcacgctcacgaaagagccgcgagcaggag
gagctgagcagcgaagcccagaacactgacgtcctgcaatcaccgctcgacagcacagcc
agagacgagctctag
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