Danio rerio (zebrafish): 568088
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Entry
568088 CDS
T01004
Symbol
rbm25a
Name
(RefSeq) RNA-binding protein 25
KO
K12822
RNA-binding protein 25
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
568088 (rbm25a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
568088 (rbm25a)
Spliceosome [BR:
dre03041
]
Complex A
U1 snRNP components
U1 related factors
568088 (rbm25a)
Complex B
568088 (rbm25a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
568088
NCBI-ProteinID:
XP_005157015
ZFIN:
ZDB-GENE-090312-142
UniProt:
A0A8M2B3B1
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Position
13:complement(32997020..33022369)
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AA seq
805 aa
AA seq
DB search
MSFPPHLNQIAQLPPGISPSQFAGFPTTVPTASPIIQVPVGMMTPPPAVLVQTAVPVVQK
LNRDTNATRNKDSEDGTSSSTGPTTTVFVGNISEKASDMLVRQLLAKCGLVLSWKRVQGA
SGKLQAFGFCEYKEPESTLRALRLLHELQLGDKKLLVKVDAKTKAQLETWKASQRRRNGT
PQTGEEAKDEEEEEVLDEEMKRRDQMVKGAIDSLIREYSSELSASSQDGEAHQRKKRKEK
KEDDINAMELEDDKRDLISREISKFRDTHKKLEEEKERERQQIEKERRERDKEREREKER
RDREREKERERERQKEREKERERERDRERERTKEKEREKERSRDRSKDRSRSREKNREEK
KREREEDEEEAYERRKLERKLREKEVAYQERLKNWEIRERKKSRDYSKETEREDERQREM
TKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMELDERDRKREKDELEEIRQR
LLAEGHPDPDAELQRIEEEAEKRQKAPLKQEQMEEVLQLSREEQQRKEVEQEVFSSDNNI
TDREEEEEEEEKEDDDREVKPCLKPTLRPVTAAASVSSASGNATPLTPGSESPHGTASPH
ENSTHEAPPTEELRPKIGLSLKLGATGSPKMAPTGRRKALAAVDSVFNKFEEEEVETAPK
KRKLVPLDYSEEERGALSLDGAEVTGSRPGGNTEEKRKHIKSLIEKIPTVKQELFNYPLD
WNMVDTTLMDRRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSTPEGILDDVAMVLDEE
AEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccctcctcatctgaaccagattgcccagttgccccccggcatttccccttca
caatttgctggcttccctacaactgttcctacagcaagtccaataattcaagtgcctgtg
ggaatgatgactcctcctccagcagttttagtacaaacagcagtgccagtggttcagaag
ctgaatagagacaccaatgccacccgaaacaaggactcagaggatggtacaagttccagc
acagggccaaccaccacagtttttgtggggaacatctcagaaaaggcatctgacatgttg
gtgcgacagttgttggcaaaatgtggcttggtcctcagttggaaaagagtccaaggagct
tctggaaaactgcaagcgtttggtttctgtgagtacaaagagcctgagtccacgctgaga
gctctccgactgcttcatgagctgcaactgggtgataagaagttacttgtgaaggtggat
gcaaagaccaaagctcagctggaaacctggaaggccagtcagaggagacgaaatgggact
cctcagactggagaagaggctaaagatgaggaagaggaagaggttctggacgaggagatg
aagcggcgtgatcagatggtaaagggggccatagacagtcttattcgggagtactccagc
gagctctcagcctcctcacaggacggtgaagcccatcagcgcaaaaagcgcaaagagaag
aaggaggatgatatcaatgccatggagctggaggacgacaagcgagacctgatttccaga
gagattagcaaattcagagacacacacaagaaactagaggaggagaaggagagagaacgg
cagcagattgagaaagagaggagggaaagagacaaagagagggagcgagagaaagagcga
cgtgaccgagagagagagaaggagcgggagagagagaggcagaaggagagagagaaggag
cgagaaagagagcgggaccgtgaacgtgaaagaacaaaggagaaagagcgcgagaaagag
agaagccgtgatcgtagcaaagacagaagcagatcaagggagaagaatcgagaggagaag
aaaagagagcgagaggaagatgaagaagaggcgtatgaacgacggaagctggagaggaag
ctgcgtgaaaaagaagtggcttatcaggagcgcctgaagaactgggagatcagagagagg
aagaaatccagggattacagtaaagaaacggagagagaggacgaaaggcaaagagaaatg
actaaagaagccaagcgcctgaaagaattcctggaggattatgatgatgaccgagatgat
cccaagtactacaggggcagcgcactgcagaagcgactgagagatcgagagaaagagatg
gaattagatgagagagaccgaaaaagagagaaagatgagttggaggagatcagacagaga
ctccttgcagaaggacacccagaccctgatgctgaacttcagaggattgaggaggaggct
gagaaacggcagaaagctcctctaaagcaggagcagatggaggaggtgctgcagctctca
cgtgaagagcagcagagaaaagaagtggagcaggaagtgttttcttcagacaataacatc
acagaccgagaggaggaggaagaggaggaggagaaggaagatgatgatcgagaggtcaag
ccgtgtctaaaacccacacttagacctgttactgctgcggcctcagtctcttcagccagt
ggaaatgccacgcccctcacacccggcagcgaatcaccacatggcactgcgtctccgcat
gagaactccactcatgaggccccacccacagaagagctcaggcctaaaataggcctcagt
ctcaaactaggcgctacaggaagtcctaagatggcgccgacaggaagacgaaaggctctt
gcagcagtggacagtgtgtttaataagtttgaggaggaggaggtggagacggcacctaag
aagaggaagctggtgcctctggattacagtgaggaggagagaggagctctcagtctagat
ggagctgaggtcaccggttcacggcctggaggaaacacagaggagaaacgaaaacacatc
aagagtctgattgagaagattcctacagtcaaacaagaactgtttaattatccactggac
tggaacatggtggatacgacactgatggacaggaggattcgcccctggatcaataagaaa
atcattgaatacatcggagaagaggaagctacgctagtggactttgtctgttcaaaggtc
atggctcacagcacgccagagggaattctggatgatgttgccatggtgctggatgaggaa
gcagaagtgtttatagtcaaaatgtggagacttctcatctatgaaacagaggccaagaag
atcggcctggtgaaataa
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