Danio rerio (zebrafish): 568161
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Entry
568161 CDS
T01004
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
568161 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
568161 (arid1ab)
03021 Transcription machinery [BR:
dre03021
]
568161 (arid1ab)
03036 Chromosome and associated proteins [BR:
dre03036
]
568161 (arid1ab)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
ARID
568161 (arid1ab)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
568161 (arid1ab)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
568161 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
568161
NCBI-ProteinID:
XP_021323975
ZFIN:
ZDB-GENE-030131-5725
Ensembl:
ENSDARG00000101891
UniProt:
A0A8M9PSC1
LinkDB
All DBs
Position
19:15494662..15579687
Genome browser
AA seq
2261 aa
AA seq
DB search
MAAQVATLNTSPPAELKKPEREPQDESVIGEKQQESKEPRADGGSPGQKELQDGADVGNA
AGGGGAGGDPDMKNGNGNPSRVNNNNSQNDSGGPEGNSHPGMAPHHPGAFPPPPYSYNQH
YNRAPFHQHGGQQSPGMAGPAVMDPYPPNSHEHGYPNHFNNYSPFPNRTPYHQGQGYGMN
SPRNSQPPAAGGQPGKQPPTGGTTPLATAASYNNQRYNMGNPQPTSTPTLNQLLTSPSST
RSYQNYPASEYGGQEGAAKGPGDMGSSSQYGGGHPAWQQRSHHPPPMSPGNTGQANRTQP
PGPMDQVGKIRGQHYGAGNPYSQQQGPPPSSQQGPPYPGQGYGPPGPQRYPMGMQGRTSG
NLSGIQYGQQMGYGQHGPGGYGQNQAGYYGQQGPSPHGGPQQSSYPQQPSTGPGSQPPYS
QQPSGTPHGQSGTSYGQPQGPHVPNQGQPPYSQTPQSQSGQSPFPQSQGPTQSQGPSQGQ
QGSQSQPGYTHPPSGSGQPAQQQGPSQQQQGPPQSQTPSSAPPQPSQQTSGQGQPSPYSQ
TPPLQTQQQQQQQQQSPFQRFPPPPQELSQDSFSSQSSAPSSNQPIVSSKSGQDDTMQGR
PSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLSGIRGP
SPSPVGSPASGPASRTGPLSPGTMPGNQMPPRPSSVQSDGMLHSSMGQDRVYMRNPQMPY
GSPQSGSTLSPRQTSGSQMHAGMGSYPQNNSMGNYGPQSGQYGPQGYPRPPGYGGMPNAN
YPGGPGMGGSMNPMAGQGGGGPYGGMPPGRMGPGQMGTRPYGPGMGPNMGGMPPQVASGM
CPPPGMNRKPQDPAAAGMHHGPSNSIHRPPGYPNMNQGMMGAGSPYAPPMNSMQGMMNQA
GQYPMPGNMSNNSAGMAPSPEFGMDKLNQSQKLNNKVDGTPKTESKKKSSSSTTTNEKIT
RLYELGPEPERKLWVDRYLAFAEEKAMGMSNLPAVGRKPLDLFRLYVSVKEIGGLTQVNK
NKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDFFNNDPKKNQAKV
QPPSPAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPMPGARSSVNLQDPFA
DGGDPAFSRRNSVTPNSGYQPGMGGPDMMGRMGPFEPNKDPFGGMRKAGEQFMNPGQGPN
SGMGEQYNRASQGPMGNMQMGQRQQYPYGPGYDRRPDSSMGPDGNMGPQPNMMPSGADAG
MYSPNRPPQQQRHDSYSNQYAGQGAPPSGPYPNQQSGMYPQQQPNYTQKRPVDGVYGPPA
KRHEGDMYPFSGQQQGPQAPGAPQSQSDMYNQYNTYPGSERRPPGPQSQFPFGFGRDRGP
NVGGPNSQPSMPPQMMGSSMSGTMPSVPDGPQGPMWPGRNEMNYPNYHNRQGPPGVPSQS
QVYHGMNRSEDMMPSDQRMNQEGPWPGHVNQRQPPYGPVASGPPMSRPLQPNYQSSQNHI
PQVSSPAPMPRPMENRTSPNKSPYMHPGMKIQKAGPPVPASHIAQPPVQPPMIRRDIAFP
PGSIEASQPILKPRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIS
NFNLNQLPGFLELVVEYFRRCLIEIFGILKEYEVGDPGQRTLIDPEAIDPEMSDEEGPEA
EQMEEDDEDDEEDLENNTVQTSQVQIKQEKEESMESPKSNDKNELEDREGEDNSCKDHLR
SSTPLQDTSASQERPKQASKFDKLPIKIMRKKDPFVIGHTSKLGRRQAFDSGLIHWSVGG
GDTTEHIQTHFESKMELLKHRKRVPVNVEPRKKVSQILETVTGEAEKVQTNEGPQQVQVL
ASKDQPSLEGKSTTTSSTSTSITATIDDVLSARRGSATEEAVRGNQDSDKEKNTFLFGID
LAQQSRNIKILEDEPHSKDETPLCTLSDWQDALARRCICVSNIVRSLSFIPGNDLEMSKH
PGLLLLLGRLVLLHHWHPERKQAPVTYEKEEEEDEGVSCERDEWWWDCLEVLRENCLVTL
ANISGQLDLSIYPESICLPLLDGLLHWAVCPSAEAIDPFPTLGLNGTLSPQRLVLETLSK
LSIQDNNVDLILATPPFSRLEKLYGSLVRMVGDRKVTVCREMAVVLLANLAQGDTVAARA
IAVQKGSVGNLLGFLEDSLAATQFQQSQGSLLHLQGSPFEPTSVDMMRRAARALHALAKV
EENHSEFTLYESRLLDISVSPLMNSLVSHVICDVLFLIGQS
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccactctcaacactagcccgcccgctgaactcaaaaagccggag
cgggagccgcaggacgagtctgtgataggagagaagcagcaggaaagcaaggagccccgg
gccgacggcggatccccgggccagaaggagctgcaagacggggccgatgtgggaaatgct
gctgggggaggaggagcaggaggcgaccctgacatgaagaacggcaacgggaacccgtcc
agggtgaacaataacaatagccagaatgattccggcggacccgaagggaacagccacccc
ggcatggctccccatcacccgggcgccttccctccacctccatacagctacaaccagcac
tacaaccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagggccg
gcggtgatggacccatacccgcccaattcacacgagcacggctacccgaaccacttcaac
aactacagccccttcccaaacaggactccgtaccaccagggccaaggctacggcatgaat
tccccgcgaaacagccagccgccggcggccggggggcagccaggcaagcagccgccaaca
ggaggaactacgccgctggctactgctgcttcctacaacaaccagaggtataacatggga
aaccctcagcctacgtccacgccgacactcaaccagctcctgacctctcccagctccacg
aggagctaccaaaactacccggccagcgagtacggcggccaggaaggagctgccaaggga
ccaggggacatgggcagcagtagtcagtatggtgggggccacccggcctggcaacaaaga
agccatcaccctcctcccatgagcccgggaaacactggacaagccaacaggacccagcct
cctggacctatggatcaggtgggaaaaattcgtgggcagcactatggtgccggaaacccc
tactctcagcagcaggggcctccccctagctcacagcagggtcctccttacccagggcag
ggttatggacctccgggacctcagaggtatcccatgggcatgcaaggccgcacttctggg
aacttaagtggaatacaatatggacagcagatgggctatggacagcatggcccaggtggt
tatggtcaaaaccaagctggctactatggacaacagggtccttccccacatggaggcccc
cagcaatcttcatatccccagcagccctccactggaccaggctctcagcccccttattcc
cagcaaccctctggtacccctcatggccagagtgggacttcttatgggcagccgcagggg
cctcacgttcccaatcagggccaacctccatattcccagactccacaatcccagtcagga
cagtctcccttcccccagtcccagggtcccactcagtcacagggtccttctcagggccaa
caagggtctcagtcgcagcctggttacactcatccaccttctggttcagggcagcctgct
caacaacagggaccctcacaacagcagcaaggcccaccacaatcacagacacctagctct
gcaccccctcagccatcccagcaaacttcaggacagggccagccttcaccttactctcag
actcctccactgcagacacaacaacaacaacaacagcagcagcagtcacccttccagcgc
tttccacctccacctcaggagctttctcaagactccttcagctcccagtcttcggctcct
tcctctaatcaacccattgtgtccagtaagagtggccaagatgacaccatgcagggacga
ccttccagccttcctgatctatcaggctccatcgacgatctacccacaggcacagagggt
gctttgagcccaggcgtgagcacatcaggtgtgtccagcagtcaaggtgaacagagcaac
cctgcacagtctccattctctccacacacctcccctcacctatcagggatccgcggcccc
tcaccttcacccgtgggctcacctgctagtggccctgcttcccgcacgggacctctttca
cctggaacgatgcctggaaaccagatgccccccagaccctcaagtgtccagtcagatggt
atgttacattcctccatgggtcaggatagagtatatatgaggaaccctcagatgccttac
ggctctcctcaatctgggtcaactttatcccctcggcaaacatctggaagccaaatgcat
gctgggatgggttcctacccacagaacaactccatgggcaactatgggccgcagagtggc
cagtatggaccacaaggttacccgagaccaccaggttatggaggcatgcctaatgctaac
tatcccggcggtcctggcatggggggctccatgaatcctatggcagggcagggtggagga
gggccttatggagggatgcctccagggcgcatgggaccgggacagatgggtacgaggccg
tacggccctggcatgggccccaacatgggtggcatgcctcctcaggtggcatctggaatg
tgtcctccacctggaatgaatagaaagcctcaggatcctgctgctgcgggcatgcaccat
ggcccatccaactccatacacagaccacctgggtatcccaacatgaaccagggaatgatg
ggagctgggtctccatacgctccacccatgaacagcatgcagggtatgatgaatcaagca
ggacagtatcctatgcctggcaacatgtccaataactctgcaggcatggctcccagtcca
gagtttggcatggacaagctcaaccaatctcaaaagttgaataacaaagtggatggaact
cctaagactgaatcgaaaaagaagtcaagttcctccaccaccactaatgagaagataact
cgtctgtatgagctgggtccagaaccagaaaggaaattgtgggtggatcgttacctagcg
ttcgctgaggagaaagccatgggcatgagcaatctccctgcggtgggacgcaaacccctt
gacctcttccgcctctatgtgtccgtcaaagagattggcggcctcactcaggtgaacaag
aacaagaagtggagggaattagccacaaatctgaatgtgggcacatccagtagtgcggcc
agctctctgaagaaacagtacatccagtgtctctatgcctttgagtgcaagatcgagcga
ggagaagacccgccacctgactttttcaataatgaccctaaaaagaaccaggccaaggtc
cagcctccgtcaccagctggatcaggatcgttacagggtcctcagacgcctcagtcaacc
agcagttctatggctgaaggtggagacctgaagccccctacacctgcctcaacacctcac
agtcagatgccacccatgcctggtgctaggagtagtgtgaatctgcaagacccgttcgct
gatggtggggatccagccttttcaagacgtaactctgtgaccccaaattcaggatatcaa
cctggtatgggtggaccagacatgatgggccgtatgggaccttttgagccaaataaggac
cccttcggtggtatgagaaaagcgggtgagcagtttatgaacccaggtcaaggcccaaat
agtggcatgggtgaacaatataatcgagcatcccaaggtccaatggggaatatgcagatg
ggtcaaagacaacagtatccatatggtccaggatacgacagaagaccagattcaagtatg
ggcccagatggaaatatgggtccacaacccaacatgatgccttccggtgcagatgcaggg
atgtactcacctaaccggcctccacagcagcagaggcatgattcttacagtaatcaatat
gctggccaaggagcaccccctagtggaccatacccaaatcagcagtcaggaatgtatcca
caacaacaaccgaattacacacagaagagaccggttgatggtgtttacggtcctcctgca
aaacgtcatgaaggggacatgtaccctttcagtggtcagcagcagggtccccaggcccca
ggtgcacctcagtcccaatcagatatgtataaccagtataacacctatccaggctcagaa
agacgcccaccaggcccacagagccaatttccttttggctttggacgagatagaggacct
aatgttggtggtccaaactctcagccttccatgccaccgcagatgatgggtagctccatg
agtggcactatgccttcggttcctgatggaccccaaggacccatgtggccagggcgtaat
gagatgaactacccaaactatcataaccgccaagggccacctggtgtcccttctcaaagc
caagtttaccatggcatgaatcgttctgaagacatgatgccttcagatcagcgcatgaac
caagagggtccttggcctggccatgttaaccagcggcagcccccatatgggcctgtagcc
tcagggccacctatgtccagacctcttcagcccaactatcaatcctctcagaaccacatt
ccacaagtatccagccctgcacccatgccaagaccaatggagaacaggacctcacccaac
aagtctccatacatgcacccagggatgaaaattcagaaggctggacccccagtccctgca
tcacacattgctcagccaccagtgcagccccctatgattcgaagagacattgcattcccg
ccaggttcaatagaggcctcacagcccattctgaaaccacgtcgtcggcttaccatgaaa
gatattggaacaccagaagcctggagagtcatgatgtccctcaagtcaggcttgttagcc
gagagcacatgggctttggataccattaatattcttctctatgatgacaatagcatttct
aactttaacctgaaccagcttcctggcttccttgagcttgttgttgagtatttccgaagg
tgcctcattgagatctttggaatattaaaagaatatgaggttggagaccctgggcagcgt
accctaattgacccagaagctattgaccctgagatgtctgatgaggaagggccagaggca
gaacagatggaagaggatgatgaagatgatgaagaagatctagaaaacaacactgtgcaa
acatcacaggtccagattaagcaggagaaagaggagtctatggaatctccaaaatccaat
gataagaatgaattagaagatagggaaggtgaggataattcatgcaaagatcatctcaga
tcatctaccccattgcaggacacaagtgcctcccaggaaaggccaaagcaggctagtaaa
tttgacaagcttcccatcaagattatgaggaaaaaagacccgtttgtcattgggcatact
agtaaattgggtaggcgacaagcttttgatagtggtcttattcattggagtgtgggtggt
ggtgacaccacagagcacatacaaacacactttgagagcaagatggaactcttgaagcat
cggaaacgagtgccagtgaatgttgagccacgtaaaaaggtatctcaaatattggagact
gttacgggtgaagctgaaaaggttcagacaaatgaagggccacagcaagtacaagttctg
gcatccaaagatcaaccatcgttggaaggtaaaagcactacaacatcaagcacgtcaaca
agtataacggccaccattgatgatgtcctgtcggctcggagaggctctgcgactgaagaa
gcagtcagaggcaaccaagacagtgacaaggagaagaatacatttctctttggcattgat
cttgcacaacagagtcgcaatatcaagatcttggaggatgaaccacacagcaaggatgaa
accccactctgtacactctcggattggcaggatgcactagctcgtcgctgcatctgtgtt
tccaacattgttcgcagcctttccttcattcctggcaatgatctggagatgtcgaagcat
ccaggacttttgctgttacttggacgacttgtgctgttgcaccactggcatcctgaacgc
aagcaggcccctgttacctatgagaaagaagaggaggaagatgaaggtgtcagctgtgag
cgagatgagtggtggtgggactgtcttgaggttctgcgggaaaactgcttggtcacgtta
gcaaacatctcaggccagctggacctgtccatctaccctgaaagtatttgcttaccactg
ctggacggcctgctccactgggctgtgtgcccatcggcagaagccattgatccattcccg
acgctggggctcaatgggactctgtctccccagaggctagtcctcgaaaccctcagtaag
cttagcatccaggataacaatgtagacctcattctggctacgccacctttcagccgtttg
gagaagctttatggttcccttgttcgcatggttggcgaccgtaaagtaactgtctgccgg
gagatggcagtggtactgctagctaatctggcgcaaggtgatacagttgctgcccgggct
attgctgtgcagaaaggaagtgttggaaaccttcttggctttttggaggacagtcttgca
gccacccaattccaacagagtcagggctcgttactgcacttacaaggttcaccctttgag
cccactagtgtggacatgatgcggcgggcggcacgtgccctgcacgcccttgccaaagtg
gaagagaaccactcagagttcacgctgtacgagtcacggctactggacatatctgtgtcc
ccactcatgaactctttggtgtcccatgtaatctgtgacgtactttttctgattggccag
tcatga
DBGET
integrated database retrieval system
