Danio rerio (zebrafish): 568211
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Entry
568211 CDS
T01004
Symbol
cngb1a
Name
(RefSeq) uncharacterized protein cngb1a isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
568211 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
568211 (cngb1a)
Ion channels [BR:
dre04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
568211 (cngb1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
568211
NCBI-ProteinID:
XP_009292121
ZFIN:
ZDB-GENE-050419-164
UniProt:
A0A8M3AS70
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Position
18:48423328..48488227
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AA seq
1302 aa
AA seq
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MFSWVIKVVPQPPDAPGKLGEEDKNKTNDAAPEATKKEEAKQETSKPKEEISEENSSQSG
VLSWLSQGFSSALPQPGSSSKLGNAEVKQEANAVSNSNTSDQAGMIGWIVQGLGKVVPQP
DEKYKGHTEPEEVTEPAAVPVVKVDPPVQEIKNVRADDLVADIPVVEVVSDEETDAANVP
FSPRVIEWIKHGFEKVIPQSPMHLRPPSAAETPAQRAASAPATPCKQEPAPAPAPTPAPP
PAPAPAPAPPPPPAAPPAPAPAPTPAAPEQPKAAEDSKGNNMVGWIVQGLGRMMPQPVLK
PKEDGSDIVQNVCILQDPCDMVLEEVDSDWEADQREQDVPQDPPLQQESSTLLQVLPNIL
PHVLAMQEQEDAETQTERWTPLIESIKKEAEETAIANMEERLQQERVEAARMAEDLARQA
AELAVRQLEEEHTAQIIIETKTEEPENEEQLPNIQEEENEEDAESLVDVCPAEPSPHESE
ISDQPPQSPALSQEEPVSTQPERTTSPPADAEQEEEPADEGCGESTCVKPALTVEEVGDG
GMTLPKIIVPPESDSMTLTVPGANLTARSKVVDSESKPEDLEEAVPGGEDEEGKMDVNKS
DLLNVDEGLERPMSAASQTSIVVHERLQELVKLFKGRTERRRDKLVDPDESDDESPSASP
AKKPGEAPPPPPPPEQKKEAEEKPVEEEEEEVQIYEFMGYKIPVPQFKIPQMPEWLRAIL
AYRFPSSIDPYTDLIYVVWLFFVTFAWNWNVWLIPVRCTFPYQTPDNIHWWLLMDYFCDS
IYIMDIFVVQPRLQFVRGGDIVCDKNDMRENYRQTERFKMDVISLFPLDVLYVFTGVKSL
LRFPRLLKYNAFFEFNDRLEAWMSKAYIYRVIRTSAYLLYSLHCNACIFYWGSDYEGLGS
TKWVYNGKGNSYIRCYYFAVKTLITIGGLPDPTTVFEIVFQLVNYFVGVFAFSIMIGQMR
DVIGAATAGEAYYRHSVDSTVKYMTSYRIPRDVQNRIKTWYDYTWKSQGMLDEQELLIQL
PDKMRLDIAADVNYSIVSKVALFQGCDRQMIFDMLKRLKSVVYLPGDFVCEKGEIGREMY
IIKAGEVQVVGGPDGKTVFVTLRAGSVFGEISLLAGGGGNRRTANVKAHGFANLFILDKK
DLAEILVHYPESQKLLRKKAKKMLTKDKKPAEAKGEVKDTGEVIPQRPETPKLYKAALEV
ATGQTFSRLKEAYKGATLEPSTPISGMSSTGPVPPPSPMHRRSPIPRPQILDEDDMVSET
TDSTVIIRMTPRVEGEEILSVEISPAEGAEAEMEEPQKTEDK
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctgggtgataaaggttgttccccagcctcctgatgctcctggcaaactggga
gaggaggataaaaacaagaccaatgatgctgcaccggaggcgacgaaaaaagaggaggca
aagcaagaaacttccaagccaaaggaggagatctcagaggaaaacagctctcagagtggt
gttttgagttggctttctcaggggttcagcagtgctcttcctcagccagggagctcatcc
aaactgggcaatgctgaagttaagcaagaggcaaatgcagtgagcaacagtaacacgtcg
gaccaggctggaatgataggctggattgtgcaaggactgggaaaagtggttcctcagccg
gatgagaaatacaagggtcacacagagcctgaagaggtcacagagcctgcagctgttcca
gtggttaaagtggatcctccagttcaagagatcaaaaatgtccgtgcagatgatctggtg
gctgatattccagtggtggaggttgtgtctgatgaggagacggacgccgctaacgtgccc
ttctctcccagggtaatagaatggatcaagcatggtttcgagaaggtcatccctcagtct
cctatgcatcttcgtcctccgtctgctgcagaaacacctgcccaaagagctgcttctgct
cctgcaactccctgcaaacaagagccagcacctgcacctgccccaacccctgctcctcca
cctgcaccagccccagcacctgcacctcctcctccacctgcagctccacctgcacctgca
cccgcacctacacctgcagctcctgagcagcccaaagcagctgaagactccaaaggcaac
aatatggttggctggattgtacaggggctcggacgcatgatgccacaaccagtcctgaaa
ccaaaagaggacggctccgatatagtacaaaatgtgtgtatcctgcaggacccatgtgat
atggtgctggaggaggtggattcagactgggaggccgaccagcgggagcaggacgtcccg
caggacccgccactgcagcaggagagctcgacactcctgcaggtcctgcccaacatcctg
ccacacgtgttggccatgcaggagcaggaggacgccgagacccagaccgagcgctggacg
ccgctcatcgagagcatcaagaaagaagcagaggagaccgccatagccaacatggaggag
agactgcagcaggagcgtgtggaagcagctcgtatggcggaggatttggcccgtcaggct
gcagaactggctgtccgacagctggaggaagagcacactgcacagatcatcatcgaaacc
aaaactgaagagccagaaaatgaagagcaactgccaaatatccaggaggaagagaatgag
gaagacgcagagagtctggtggacgtgtgtccggccgagccttcaccgcacgagtctgag
atctcagatcagcctcctcagagtccagcactgtcacaagaagaacctgtgagcactcag
cctgagcgcaccacatctccacctgctgatgctgaacaggaagaggagcccgctgatgaa
ggttgtggagaaagcacttgtgtgaagccagcattgacggtggaggaggtgggagatgga
ggaatgacccttcccaaaatcattgtcccgccagagtcagattcaatgaccctcactgtt
cctggagcaaatctcacagcccgcagcaaagttgtggattcagaaagcaaaccagaagat
ctagaggaggcagttcctgggggagaagatgaagaaggcaaaatggatgtgaacaagtct
gatctgctgaatgtggatgaaggccttgagcgtcccatgtcagcagccagtcaaaccagt
atcgttgtgcatgagcgtctgcaggagctggtcaagctgtttaagggccgaactgaacgt
agacgagacaaactggtggatccagatgagtctgatgatgaaagcccttcagcatctcca
gccaagaagcctggcgaagcgccgcctccaccacctccaccagagcagaagaaagaggct
gaagagaagcctgtggaggaggaagaggaggaagtgcagatctatgagttcatgggctac
aagatcccagttccccaattcaaaatcccccagatgcctgagtggctgagagccattctg
gcataccgcttcccctccagcattgacccttacactgatctgatctacgtggtgtggctg
ttcttcgtgacgtttgcgtggaactggaatgtttggctgattcctgtgcgctgcactttc
ccctatcagacgcctgacaacattcactggtggctgctgatggactacttctgtgactcc
atctacatcatggacatcttcgtggttcagccacgactgcagttcgtcagaggaggagac
attgtgtgcgacaaaaacgacatgagagagaactacaggcaaacagagcgatttaagatg
gatgtgatcagtctctttccactggatgtcctctatgtcttcactggtgtcaaatctctc
ttacggtttcctcgtcttctaaagtacaacgcgttcttcgagtttaatgatcgtctggag
gcttggatgagcaaagcctacatttacagggtgatccgtacaagtgcgtatctgctgtac
tctctgcactgcaatgcctgtattttctattggggctcggactatgagggactgggctcc
accaaatgggtttataatggcaaagggaacagttacatccgctgctattacttcgctgtc
aagactctgatcaccatcggaggtttgccggaccccaccactgtctttgaaattgtcttt
cagctggttaactacttcgtgggggtcttcgctttctccattatgatcggtcagatgaga
gacgtgatcggagccgctacagcaggagaagcgtattatagacactctgtggacagcact
gtcaaatacatgacctcctacaggatcccccgcgacgtccagaaccgcattaagacttgg
tatgactacacctggaagtctcagggcatgctggatgaacaggagctgctcatacaactg
ccagataagatgcgtttggacatcgctgctgatgtcaactacagcatcgtcagtaaggtg
gcgctctttcagggatgtgaccgacagatgatattcgatatgctcaagaggttgaaatct
gtggtgtatcttccaggagactttgtctgtgaaaaaggagagatcggccgagagatgtac
atcatcaaagctggagaggtgcaggtggtcggagggcctgatgggaagacggtgtttgtg
actctgagagctggctctgtgtttggggaaatcagtttgctggcaggtggtggtggaaac
cgacgaacagctaatgtaaaagcgcatggtttcgctaacctcttcatcttggacaagaag
gacctggcagagatcttagtgcactatcccgaatcccagaaactgctgcgcaagaaggcc
aagaagatgttgaccaaagataagaagcctgcagaagcgaagggcgaggttaaagacacg
ggtgaggttattcctcagcggcccgagactcccaaactctacaaggcagccctagaggtc
gccacaggacagacgttttcccggctgaaggaggcttataagggagcaactctagagccg
tccacccctatatccggcatgagctccacaggtccagtgccgccaccatcccccatgcac
cgccggtcccccattccccggcctcaaattctagatgaagacgacatggtgtccgagacc
accgacagcaccgtgatcattcgcatgactccccgcgtggagggagaggagattctgtct
gtggaaatcagtcctgcggagggagcagaagcagagatggaggagccccaaaaaactgaa
gacaagtga
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