Danio rerio (zebrafish): 568323
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Entry
568323 CDS
T01004
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
568323 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dre03400
]
568323 (mlh3)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
568323 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
DNA_mis_repair
MutL_C
HATPase_c
Asparaginase_2
RNA_pol_RpbG
Motif
Other DBs
NCBI-GeneID:
568323
NCBI-ProteinID:
XP_005162267
ZFIN:
ZDB-GENE-060810-45
Ensembl:
ENSDARG00000056334
UniProt:
A0A8M2B931
A0A8M9P5H1
LinkDB
All DBs
Position
23:24589165..24599011
Genome browser
AA seq
1144 aa
AA seq
DB search
MIKSLPINVQAQLRSGVAIFSLQQCVEELILNSIDAGATCVAVKIDIEACKLQVIDNGSG
MCLEDMEKVGLRYNTSKCSSLEDLDNLHFYGFRGEAISSIVSLAEMVEISSRTKQSVKTY
VKSFNETNALEVFEAQTVRPSAGTTVSVYNLFHNMPVRRKRMDPVLETERIRQRVEAISL
MHPSVSFTVKKENSAHMMVQLSKTSSTYYRFVQIHGLNRAQKLGEVNYEHEQFQITGHIG
REGHYNNSLQFLFVNERLLLKTRIHKTLNCLLKRVSGAARQNNSPTSYPVTSSPKQKGGY
DLHGIYVINIKCHYSEYDICLEPAKSLIEFKDWDNVLICIEEGVKAFLTKENLVSELNTI
SNDGLPCSPVRNAESSEKQKRSSEETNEACETMIEKNDSSVVDVADGVQMLEQESIYTES
DAGKALQSEDLPFQTTLVGAAEINNNHKEDENAVCSNISHTDSPLAVNKNVMGSKSHKIS
LPEAQDSLQKFYTPNKTSPKKRRMPLNDTEEDKHVFYGGPSKTFKATPPRKLTLSFETGS
LDKFKRLFGKEAEKKQPSTEKTSLLNPNPNDRFVGSTSCLDDLHHPVLRNSSGHPTTHRS
TESSSLNKKNKISLAAKCSYLKQDKELCRDSNFLKRDLSSFPPSQDSCFEELEKTLLDED
VLFGSSGIVDSVDFPLIEQDTALPSVAEESHLFNNNVTFFIGNESSVDEASVASQRDPQH
SIAGNEGQTTNESVESIPVSNSWLAHYDSWLGKLVYINQVTGLSKYNSPPMEETQVPCTT
DVTNMAVSVISKAGFEYRCYPFQSDIVLPFLPKPRAERAFNSGTDSREDAQAPDSLSTLF
SEWHNPVFIRPPEVAVDVTSGQAEGLAVKIHNILFPYRFTKNMIHTMRVINQVDKKFLAC
LINTAGQNTSESSTDEGNLLVLVDQHAAHERVRLEGLIADSYEDDPDTPGKKRLCSSRVT
PPLEINVTEEELRLLRSCQGFLRGLALDVRFPKSESLSVFLESLPTCFIEKESTELRRGR
RSVIKTIAEDYLREHIELFRSTGRVRGILPLTVHNVLASQACHGAIKFNDVLNKEECCSL
VSSLSSCRLPFQCAHGRPSIVPLADLHHLEEQQDIPKPNLKKLRRMYKSWQLYGQNQYFA
QNKA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagagtttacccataaatgttcaagcacagctgcgctctggtgttgctattttc
tcattgcagcagtgtgtggaggagctcatattaaacagcattgatgctggagcaacatgt
gtggctgtcaaaatagacatagaggcctgcaagcttcaggtcattgacaatggctcagga
atgtgcctggaggacatggagaaagttggactacgctacaacacaagcaaatgcagctcc
ctggaggatttggataatcttcatttttatggtttcagaggagaagccatttccagtata
gtttcccttgcagaaatggtggaaatatcatctaggactaagcagtctgtgaaaacgtat
gttaaatcctttaatgaaacaaatgcattggaggttttcgaagctcaaactgttcgccct
tctgcagggacgaccgtctcagtctacaatctcttccacaacatgccagtccgtagaaag
cgaatggatcctgttttagaaaccgaacgaatccgtcagagagtggaggccatatcttta
atgcatccatctgtgtcattcacagtgaaaaaagaaaattcagcacacatgatggtgcag
ctctctaaaacaagcagtacctattataggtttgtccaaattcatggcttaaatcgagcc
caaaagcttggagaagtcaattatgagcacgagcagttccaaataaccggtcatataggc
cgtgagggccattacaacaacagtttgcaatttttatttgtaaatgagaggcttcttcta
aagacacgcattcataaaacactaaactgccttttaaagagagtaagcggtgctgcaagg
caaaacaacagcccaacctcatatccggtaacatccagccccaaacagaagggaggatat
gatctccatggcatttatgtgataaatatcaaatgtcattactcagagtatgacatatgc
ctcgaaccagccaagtctctgatagagttcaaagactgggataatgtgctcatctgcatt
gaagaaggggtaaaggcattccttactaaagaaaacctggtgtcggagttaaacacgatc
agtaatgatggtctaccatgtagtccagtaagaaatgcagaaagctcagaaaaacaaaag
cgcagttctgaggaaacaaatgaagcatgtgaaacgatgattgagaaaaatgattcaagt
gttgtggacgtcgctgatggtgtgcaaatgttagagcaggaatcaatatacactgaatcg
gatgcaggaaaagcacttcagagtgaagatttgccttttcagaccacacttgttggtgct
gctgaaattaataacaaccacaaagaagatgaaaatgcagtttgttcaaatataagccat
actgattcaccgcttgctgtaaacaaaaatgtaatgggaagcaaatcgcacaagatttca
cttccagaagcacaagatagtttgcagaaattctacaccccaaataaaacctctccaaaa
aagagaaggatgccgttaaatgacaccgaagaagacaaacatgttttttatggtggtccc
tcaaagacatttaaagctacaccacctcgtaaattaaccctgtcttttgaaacgggatct
cttgacaagttcaaaaggttgtttgggaaagaggctgagaaaaaacaaccaagcacagaa
aaaacaagccttctaaatccaaatcccaatgaccgctttgtaggatctacatcgtgtttg
gatgatctacaccatccagtattgaggaacagttcaggtcatcctactacacacagatct
actgaatcttcatcgctgaacaagaaaaacaaaatatcattagctgccaaatgttcctat
ttaaaacaggacaaagagctctgcagagattcaaacttccttaaacgggacctttcatct
ttcccaccctcacaagactcatgctttgaagaattagaaaaaaccctcttagatgaagat
gttttatttggatcatctggaattgttgattctgttgactttcctcttattgaacaggac
acagcattaccatctgttgcagaagaatcgcacctcttcaacaacaatgtgactttcttt
attggaaatgagagcagtgttgatgaagccagcgttgcctctcagcgtgatcctcaacac
agcattgcaggaaatgaaggtcagactacaaacgaaagtgttgaatcaatcccagtgtcc
aacagctggttggctcattacgatagctggttaggaaagctggtttatatcaatcaagta
acagggctcagcaagtacaactctccccctatggaggagactcaagtgccatgtaccaca
gatgtcactaacatggcggtcagtgttatttcaaaagcaggctttgagtacaggtgttat
ccatttcaatcagacattgtacttccctttctgcccaagcccagagcagaaagagccttt
aactcagggacagacagcagagaggatgcccaagctcccgattcactgtcgactttattc
tcagaatggcacaaccctgtgtttatacgaccaccagaggttgctgttgatgtaaccagc
ggccaagcagagggtcttgctgtaaaaatccacaatattcttttcccctaccgttttacc
aagaatatgatccacacaatgagagtcatcaatcaagtagacaagaagtttcttgcttgt
ttgataaatacagcagggcagaacacctctgaaagcagtacggatgaagggaatcttcta
gtgctggttgatcaacatgctgcccatgaaagagttcgactagagggtttaatagcagac
tcttacgaggatgacccagacacacctggaaaaaaaaggctgtgttcctcacgtgtaacc
ccacctttggagattaatgtaaccgaggaggaattgagacttttgaggtcttgtcagggt
ttcttgagaggtcttgcgttagatgtgaggtttccgaaaagtgagtcactgagtgtgttt
ttggagagtctgcccacatgtttcatagagaaagaaagcacagagctccgccgtggaagg
cgctcggtaattaaaaccattgcagaggactatctgcgagaacacattgagctttttcgg
tcaacaggaagagtgagaggaattctgcctctgacagtacataatgtgcttgcctcacag
gcttgtcatggagcaattaaattcaatgacgttttgaataaagaggagtgctgtagtctg
gtgagctcgctttcctcttgtcggcttccttttcagtgtgctcatggaagaccctccatc
gtccctctggcagatctgcaccacctggaagaacagcaggatattcccaaaccaaatctg
aagaaactaagaagaatgtacaagtcatggcagctgtatggacaaaatcaatattttgca
cagaacaaagcataa
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