Danio rerio (zebrafish): 568426
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Entry
568426 CDS
T01004
Symbol
spata13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
568426 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
568426 (spata13)
Membrane trafficking [BR:
dre04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
568426 (spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_2
PH
SH3_9
Motif
Other DBs
NCBI-GeneID:
568426
NCBI-ProteinID:
XP_021329453
ZFIN:
ZDB-GENE-091116-25
Ensembl:
ENSDARG00000062837
UniProt:
A0A8M2B9P0
LinkDB
All DBs
Position
24:complement(25745646..25784310)
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AA seq
1251 aa
AA seq
DB search
MIKATSSDLQGSSHSNDPQSDPFTEDQLMNPSLRSGCRVQVQPVLSEPCYEENRLNRLKS
HAQSVPVIADGQAKLYPSRTVRLFPTQAKSEDGASQRGPPVTPQAWSGLAGFRVMGSFKK
LRTSVLQGIQNRSNAMGASQERNLSSVIEDSSSFLVTKREISISQTHETEKVLNGTSRTR
KTSSVSDEDDCEEVCGFQRNSHFSQSIRKAYGAGRISMLDMVNKQSLSTAEPDPVNTVES
TEPCNNQDTQGNVKVLKRLSKSADNLHVFKTHFRRKVATAEPQNPECSSTVMLQRTSSSS
SVDLQEHVLGSHQSPMRTRGHLQKLVGSLTDLTVKRKNIASPSPRVPVSPLSQLHDDYSR
RTPCVPTSGRQRRPSPVPTKTQQDSTCQTIPILHPAPSCPAVFISDLDDSLEPPSKTTAL
ISDYVQMAVSSSELHIGDSACPPEKYCEPMECHQNGLNDHYSQIPQQCSSPCLKPTVNGN
DVNLQCLWTEERETDDLEASSDNRITRAFLKSDEASTPAASPITNSCCSESPLGTPTTPN
SPAFVSASPTSVVPRKRAGRSKPRPVSDYGQLASSKFCILEEDRELENMDYTSQKDYISN
GSYIESSRPENGHVCTQKESRKRRPISVIGGVDLYSSQPAEQKDDTESLPSPVCRPPVPS
HRVPPYRAVSARLRPCVFSQSTPIGLDRMGRRKGRRVLSDGSSDPMLEDSVSEEDGSFEE
LTEGTPYLQPEVDLFTLNQHIESGRAVYAEALWDHVTMEEQELAFKAGEVIRVLDVQEQD
WWWGMVGDREAWFPSSFVRVRVNQEDSSSESVESTPDTEEPIPSDSHKQNPEHRKQMRAN
VVKEIMDTERVYIKHLKDICEGYIRQCRKHPGMFTDTQLKTIFSNIEDIYRFQRKFLKDL
ERKYNPENPHLSEIGSCFLQQEEGFSIYSEYCNTHPVACAELQRLMKQSRYKHFFEACRL
LQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKEHSDFAGVCAAHKAMKNVASLINE
RKRRLESIDTIAHWQVAILHWAGEDVLARSSELIHSGELTRIVRPGKTQQRSYFLFDHQL
VFCKKDVLRRDLLHYRGRMDTDLLEPSDLPDGRHTELGLLKNAFLLRHAENLNVLCVLCC
KKSQDKQRWLQAFARERKRVQEDQEMGMEITEAQRKQAVHNARKSKHGKMKNMNYSGHPA
PPHHQPLHPLHQRHVTVPTSVPQQQVFTLAEPKKKPSHLLYSLARSALFRK
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgataaaggcaacttcgtcagacctgcagggttcctctcatagcaatgacccacaaagt
gaccctttcactgaggaccaactgatgaatccaagtctgaggtctggttgtagagtccag
gtgcaaccggttttatccgagccttgctatgaagaaaaccggctaaaccgactaaaatct
catgcccagtctgttcctgtgattgccgatggccaggccaagctatacccatccaggaca
gttcgtctgtttcccacacaggcaaaatctgaggatggtgcttcacaaagaggtccacct
gtcacaccacaggcttggtctggattggctggctttcgtgtcatgggttcttttaaaaaa
ctgcggacttcagttctccaaggaattcagaacaggagcaatgccatgggagccagtcag
gagagaaacttatcctcggtgattgaagatagtagtagttttttggtaaccaaacgagag
atttccatcagtcaaacccacgaaactgaaaaagtgttaaatgggacatctcgaaccaga
aagacatcttcggtttcagatgaggatgattgtgaggaggtgtgtgggtttcagaggaat
tcacacttttctcagagtatccgcaaggcttatggggcaggacggatatcaatgcttgac
atggtcaacaaacagagcctgtctactgctgagccagaccccgtcaacactgtggaatcc
acagaaccttgcaataaccaagacactcaaggaaatgtcaaggttctcaaaagactaagc
aaaagcgcagataatctccacgtttttaagactcattttagacgcaaagttgccacagct
gagccacaaaacccagaatgttccagcactgtaatgcttcagaggacctccagctcctca
tcggttgacttgcaggaacatgttttaggtagccatcaaagccccatgagaacacgagga
catttgcaaaagcttgtcggtagtttaactgacctcacagtcaagcgcaaaaacattgca
agcccttctccaagagtgccagtgtcaccccttagtcagctacatgacgactactcgcgc
agaactccttgtgtccccactagcgggcgccaacgtaggccttcgcctgtacccaccaaa
acccagcaggacagtacttgccaaaccattccaattttacaccctgctccctcttgtcct
gcagtctttatctctgacctggatgactctctggagcctcctagcaaaaccacagccctt
ataagtgactatgtacagatggccgtgtcctcatctgagctgcatattggtgactcggct
tgtccaccggaaaaatactgtgaacctatggagtgccatcaaaatggattaaatgatcac
tactctcaaattccccagcagtgctcaagcccttgtctgaagccaacagtcaatggcaat
gatgttaacttgcagtgtttatggactgaagagagagaaactgatgatcttgaggcttca
tcagataaccgcatcaccagagcgtttcttaaaagtgatgaggcctcgacccctgctgct
tcacccatcacaaacagctgctgctcagaatctccattgggaactccaacaacaccaaac
tctccagcttttgtcagtgcctcccccacctctgtagtgcccaggaagagagcaggtcgc
tccaaaccccgtccagtgtccgactatggccagttggccagctcaaagttctgcatcctc
gaggaggacagggagttggagaatatggactatacttcccaaaaggactacattagcaat
ggcagctacatagagagcagcagacctgagaacggtcatgtgtgcactcagaaagaaagc
agaaaaagacgtccaatctccgttattggaggagtggatctgtattcatctcaacctgcc
gagcagaaggatgacactgagagtttgccctctccggtttgtcgtcctccagtgccctct
cacagggtgcctccataccgagcagtttctgcccgtctgagaccctgcgtcttctcccaa
agcacaccgattggcctggatcggatggggcgtcgcaaagggcgcagagtgctcagtgac
ggcagctctgatccaatgcttgaggacagtgtgagtgaggaggatggcagctttgaagaa
ctgactgaaggaacaccatatcttcaaccagaagtcgatctttttactctcaatcagcac
atagagtcgggtcgggccgtgtatgcagaggctctgtgggaccatgtcacaatggaggag
caggagctggcctttaaagccggggaggtgatccgagttctggatgttcaggagcaggac
tggtggtgggggatggtgggcgatcgggaggcttggtttccctctagctttgtgcgggtt
cgggtgaatcaagaggattcgagcagtgagagtgtagaaagcacgccagatacagaggag
cccatcccatcagactcgcacaaacaaaaccctgagcaccgaaagcagatgagagccaat
gtggtcaaagagattatggacacggagcgagtttacatcaaacatctcaaagatatctgt
gagggatatattcgtcaatgtagaaagcaccctggcatgttcacagacacacagctaaag
acaatcttcagcaacatcgaggacatctacaggttccagaggaagtttctgaaggatttg
gaaaggaaatacaaccctgaaaatcctcatctaagtgagataggctcctgcttccttcaa
caggaggaaggtttctccatatactctgagtactgtaacacacatccagtagcgtgtgct
gaactgcagcgactgatgaaacagagccgatataaacacttctttgaagcctgtcgtctc
ctgcagcagatgattgacatttccattgctggattcttgctcacaccagtgcagaagatt
tgtaaataccctcttcagctaggagagcttttgaaatacacacccaaagaacacagtgac
tttgcaggggtgtgtgcggcacataaagcgatgaagaatgtggcaagtctgataaatgag
aggaaaaggcgtcttgagagcattgacaccatcgctcactggcaggtggccatcctgcac
tgggcgggtgaggatgtgttagcaagaagctcagagctcatccactctggcgagttaact
cggatagtacggcctggaaaaacccagcagcgcagctactttctgtttgaccatcagctg
gtgttctgtaagaaagacgtcctgcgcagagacctgctgcactaccgcggccgtatggac
acagatctgctggagccgagtgacctgcctgatggacggcacacagagctgggcctgctg
aagaacgcctttctcctgcgccatgcggagaacctgaacgtgctgtgtgtgctgtgctgc
aagaagagccaggataagcagcgatggctacaggcttttgcccgggagcgtaaacgtgta
caggaagaccaagagatggggatggagattactgaagcccagaggaagcaagcagttcat
aatgccaggaaatctaaacacggcaaaatgaaaaatatgaattattctggccatcctgcg
cctccccaccatcagcctcttcatcctcttcatcagagacatgtgactgtgccaaccagc
gtccctcagcagcaggtctttactttagcagagcccaaaaagaagccttcacacctgctg
tattctctcgcccgcagtgccctcttcaggaaatga
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