Danio rerio (zebrafish): 568508
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Entry
568508 CDS
T01004
Symbol
cdh12a
Name
(RefSeq) cadherin-12a precursor
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
568508 (cdh12a)
Cell adhesion molecules [BR:
dre04515
]
Cadherins
Major cadherins
568508 (cdh12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Cadherin_2
Cadherin_CELSR2_9th
Stevor
RIFIN
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
568508
NCBI-ProteinID:
NP_001153302
ZFIN:
ZDB-GENE-070912-673
Ensembl:
ENSDARG00000078226
UniProt:
B0V236
LinkDB
All DBs
Position
2:28995776..29116892
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AA seq
800 aa
AA seq
DB search
MLMGNCLLLFLWCLLEKSFVSSLHSSSQSRMGKEQHRNLMAHRKHGVMGVHRVKRGWVWN
QFFVLEEYMGSDPQYVGKLHSDMDKGDSMVKYTLSGEGVGSIFTIEPSTGDIHALRSLDR
EEKPYYTLRAQAVDMLTGRPLEPESEFIIKVQDINDNEPRFLEGPYSASVPEMSPVGTYV
TQITATDADDPTYGNSARIVYSILHGQPYFSVDPKTGVIRVALPNMDREVKETYQVVIQA
KDMGGQLGGLAGTTTINITLRDVNDNPPRFSKSIFHLRVPESSPVGSSVGRVKAHDLDTG
KNAEVEYSILPGDGGSMFDIYSNKDTQEGTVILKKRLDFETRKAYTFKVEASNAVLDHRF
LHLGPFKDTAMVKVNVLDVEEPPVFSRLYYNMETYEDTPVGIIVGAVNAEDLDVSNSPVR
YSVEWRKDAENHFAIDPVEGTLSISEALDRERNAEHNVTVVATKVNNPQLSSKVTVTIKV
LDVNEFPPELAFVYETFVCENAKAGQVIQILSATDKDVPAVEHRFYFKSSQTRNRNFTIR
DYGNNTAGVVTRRGGFRRLEQSMYLVPVVVEDGGYPIRSSTGTVSVRVCSCDADGSLLSC
NAEAVFFPMGLSTGALMAILLCIVILLVMVVLYMGLRRHKKKDTLMSSKEDVRDNVIHYD
DEGGGEEDTQAFDIGTLRNPKGIKETGPLQKIRSEDKADQASAAEDSEDIRAYIHHCLLE
SSTPPYDSLVTYAYEGDGSVAESLSSIESWVLEPKEDYRNLCDWGPRFKTLAGIFKEHEG
KEKEKVENEAHAEALQDRLD
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgctaatggggaactgcctgctgctgttcctctggtgcctcttggaaaaaagctttgtt
tcttccctgcactcttcatcccagagcaggatggggaaggagcagcacaggaacctgatg
gcacatagaaagcatggcgtgatgggagttcacagagtcaagagaggatgggtgtggaac
cagttctttgttctggaggaatacatgggatctgatccgcagtatgtaggaaagctccac
tctgacatggataaaggagatagtatggtgaaatacacactctcaggtgaaggagttggc
tctattttcaccatcgagccaagtaccggagacatccatgccttaaggagtctggacaga
gaagagaagccttattacacactgagagcgcaggctgtggacatgctgacgggcagacca
ttagagcctgagtcggagtttattatcaaagtccaggacatcaatgacaatgagccaaga
tttctggagggcccatattcggccagcgtcccagagatgtcacccgttggcacatatgtg
acacaaataaccgccactgacgctgatgaccctacttatggaaacagtgcacggattgtg
tacagcatccttcatgggcagccctacttctctgttgaccccaagacaggggtcataaga
gttgccttacccaacatggacagggaagttaaagaaacctaccaggtggtcatccaggcc
aaagacatgggcggtcaacttgggggtttagcaggaaccaccaccatcaatatcactctc
cgagacgtcaatgacaacccgccacgcttttctaaaagtatttttcacctgcgtgttcct
gaatcatcaccggtgggctcgtcggtgggaagggtcaaagctcatgatctggacactggc
aaaaacgctgaagtggaatatagcattctgcctggtgacggaggatccatgtttgatatt
tacagcaataaggacactcaagagggaactgtcatactgaaaaagcgtctggactttgag
accagaaaggcctacacctttaaagtggaagcttcaaacgcagttcttgatcatcgattc
ttacatttgggaccttttaaggacactgccatggtgaaagtcaatgttctggatgtggaa
gagcctcctgtcttcagccggctgtattacaacatggagacgtatgaagacacaccggtg
ggcatcattgttggtgctgtcaatgctgaagacctggatgtaagcaacagtcctgttaga
tattctgttgaatggagaaaggatgccgaaaaccactttgcaatcgaccctgttgaagga
actctgtctatcagtgaagccctggaccgtgagagaaatgctgaacacaacgtcactgtt
gtagcaacaaaagttaacaatccccagctgtccagcaaagttacagtcactatcaaggtg
ctggatgtcaacgagtttcctccagaacttgcctttgtgtacgaaacgtttgtttgtgaa
aacgcgaaagcaggacaggtgattcagatcctcagtgccacagacaaagacgtgcctgct
gttgagcaccgcttctacttcaaatcttcacagaccaggaacagaaactttaccatcagg
gactatggaaacaacacagctggagtggtaaccagacgagggggttttcggcgactggag
cagagcatgtacttagtgccagtggtggtggaggatggagggtatcccatcagaagcagc
actggaacagtgtcggtgagggtgtgttcctgcgacgctgatggatccctgctatcctgc
aatgcggaggccgtcttcttccccatgggactcagcactggagctctgatggccatactg
ctgtgcattgtcattctgctggtgatggtggtgctctatatgggcctgagaagacacaag
aagaaggacactctgatgtcgtctaaagaggacgtcagggacaatgtgatccactatgat
gatgaggggggcggggaagaggacacccaggccttcgacataggtacgttacgcaatccc
aaaggcatcaaagagacggggccgctgcagaaaataagatcagaggacaaggccgatcag
gctagcgcggccgaggacagcgaggacatccgagcttacatccatcattgtcttttggag
agctccacacctccgtatgactccctggtcacatatgcatatgaaggagacggttcggtg
gccgaatcacttagttctattgaatcttgggtgctcgagcccaaggaggattacagaaat
ctgtgtgactggggtcctcgcttcaaaacactggctgggatatttaaagagcatgagggt
aaggaaaaggagaaagtggaaaatgaagcacacgctgaggcactacaggacaggctggac
tga
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