Danio rerio (zebrafish): 568616
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Entry
568616 CDS
T01004
Symbol
smyd2b
Name
(RefSeq) N-lysine methyltransferase SMYD2-B isoform 2
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00310
Lysine degradation
dre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
568616 (smyd2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
568616 (smyd2b)
Enzymes [BR:
dre01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
568616 (smyd2b)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
568616 (smyd2b)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
568616 (smyd2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-MYND
SET
TPR_12
MYND_ZMYND11_ZMYD8
TPR_10
TPR_8
TPR_NPHP3
RD3
Motif
Other DBs
NCBI-GeneID:
568616
NCBI-ProteinID:
NP_001038756
ZFIN:
ZDB-GENE-041001-201
Ensembl:
ENSDARG00000005629
UniProt:
Q5RGL7
LinkDB
All DBs
Position
20:590910..608608
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AA seq
423 aa
AA seq
DB search
MMKAEGIPGIEQFASPGKGRGLRVSRAYGVGELLFSCPAYSYVLSVGERGLICEQCFTRK
KGLAKCGKCKKAFYCNANCQKKNWPMHKLECQAMCAFGENWRPSETKAQKERSPSEILLL
LGEMEAHLEDMDNEKREMTEAHIAGLHQFYSKHLDFPDHQALLTLFSQVHCNGFTVEDEE
LSNLGLAIFPDIALLNHSCSPNVIVTYRGINAEVRAVKDISPGQEIYTSYIDLLYPTADR
LERLRDMYYFSCDCKECTTKSMDVVKMSVRKRSDEIGEKEIKDMVRYARNSMENFRRAKQ
DKSPTELLEMCELSIDKMSTVFDDSNVYILHMMYQAMGICLFTEDYEGAVRYGEKVIKPF
TVLYPAYSMNVASMFLKLGRLYIALDRKLAGIDAFQKALTIMEVVHGKDHTYVTELKQEM
RDF
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaggcagaaggcatcccgggcatcgagcagttcgccagcccgggcaagggcaga
ggtctgcgggtgagcagagcatatggagtcggtgaactactgttctcgtgtcccgcatat
tcatacgtgctgtctgtgggagagagaggactcatctgtgaacagtgctttacgaggaaa
aagggtcttgccaaatgcggaaagtgcaaaaaagcgttctactgcaatgcgaactgtcag
aaaaagaactggcccatgcacaagctggagtgtcaggccatgtgtgcattcggagagaac
tggcgcccctcagagacgaaagcccagaaagaaagaagcccgtcagagattctgctgtta
ctgggagaaatggaagcccacctggaggatatggataatgagaaaagagagatgactgaa
gcacatatagccggtctacatcagttctactccaaacaccttgacttccctgaccatcag
gccctgctcacactattctcacaggttcactgtaacggcttcactgtggaggatgaggaa
ctctcaaacttgggtttagccatttttccagacattgccctcttgaaccacagttgctct
cccaatgtcatagtcacatacagaggcatcaacgctgaagtacgggccgtgaaggacatc
agtccagggcaggagatttacaccagctacatagacctgctgtaccctacagcggaccga
ttggagagactcagagacatgtactacttcagctgtgactgcaaagagtgcaccaccaaa
tctatggatgtggtgaagatgagtgtgcggaagcggagtgatgaaatcggggaaaaggag
atcaaggatatggtgcgttacgctcggaactccatggaaaacttccgcagggccaaacaa
gacaaaagtcccactgagctgctggagatgtgcgagctcagcattgacaagatgagcacc
gtgtttgatgactccaacatctacatccttcatatgatgtaccaggctatgggcatctgc
ctcttcacagaggattatgaaggagcggtgcgctatggggaaaaagtcatcaagccattc
actgtcctctacccagcatactctatgaatgttgcatctatgtatctgaagttgggcaga
ctctacattgctctggacaggaagttggctggcatcgatgcctttcagaaggcgttgacc
atcatggaggttgttcatggaaaggaccacacatatgtaacggagctcaaacaggagatg
agagatttctga
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