Danio rerio (zebrafish): 568678
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Entry
568678 CDS
T01004
Symbol
tent4b
Name
(RefSeq) terminal nucleotidyltransferase 4B
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
568678 (tent4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
568678 (tent4b)
03016 Transfer RNA biogenesis [BR:
dre03016
]
568678 (tent4b)
Enzymes [BR:
dre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
568678 (tent4b)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
568678 (tent4b)
Transfer RNA biogenesis [BR:
dre03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
568678 (tent4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
TUTase
Motif
Other DBs
NCBI-GeneID:
568678
NCBI-ProteinID:
NP_001313625
ZFIN:
ZDB-GENE-041021-2
Ensembl:
ENSDARG00000060071
UniProt:
A0A1D6UPT1
LinkDB
All DBs
Position
7:complement(38075308..38110007)
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AA seq
653 aa
AA seq
DB search
MDPRIAWFQPEQRGPANNLWMHIWDTTQTLGNLYFNNNCNTASAKLTTNGDGASSNAADS
SSGRPKDQQGMSGSKPDSEVSEQQDFIPLEAFNNINSSRPGRVVGGGGQVGGSGVAGVGN
ELPSKRKRDNKASTYGFNRSLLLTDGAEDGYAGTPWKSRNYSDGIVGLHEEIKDFYEYIS
PRPEEEQMRHEVVARIQRVIKDLWPNAEVCVFGSFSTGLYLPTSDIDLVVFGNWETLPLW
TLEEALRKRKVADENSIKVLDKATVPIIKLMDSHTEVKVDISFNVQSGVKAANLIKDYKQ
QYPVLPYLVLVLKQFLLQRELNEVFTGGIGSYSLFLMAVSFLQLHCREDVSSSNPNLGVL
LIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKSMLDGYRPSMLYIEDPLQPGNDVGR
SSYGAMQVKEAFDYAYVILSHAVSPIAKYYPNNKSESILGRIIRVTQEVVEYRDWISAQW
GQKSSKEPVLNCNANDLTLLVEREELDECNNNLSEDSVVCTSVPRSKVSSNSSSPSPSSP
SSPSSSSSSPSSTASSSSDADSDGTPYKTAKALGGRSTYSENTERISNHRSQNHSASIST
PTHKGNKSRQLANKSTQGPHNNPNKIQQSSKSVKSNVKKRKPQRDSAHEDLCR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagaatcgcctggtttcagccagaacagcgcggaccggccaacaacctgtgg
atgcacatctgggacacgacacagacgctgggaaacctctactttaacaacaactgcaac
acagccagcgccaaactgacgaccaacggcgacggtgcgtcgagcaacgcggccgacagc
agcagcggtagacccaaggaccaacagggcatgtctgggtccaaacccgacagcgaggtc
tccgaacaacaggacttcatccctctggaagcgtttaacaacattaacagcagcaggccg
ggcagggttgtcggcggaggggggcaagtgggtggcagcggggtcgcaggagtgggaaac
gagttaccaagcaagaggaaaagagacaacaaggcgagcacctacggctttaaccggagt
ctgctgctgacggacggggcggaggacggctacgcgggcaccccgtggaagagcagaaac
tactcggatggcatagtggggctgcatgaagagataaaggacttttatgagtacatatct
cctcgtccagaggaggagcaaatgaggcatgaggtggtggccaggatccagagagtcatc
aaggacttgtggcccaatgctgaggtttgtgtgtttgggagcttcagcactggcttgtat
ttgccaacaagtgatatagacttggtggtgtttggtaactgggagactttacctctctgg
actctggaggaggctctacgcaagagaaaagttgcagatgaaaactctattaaagtcctg
gacaaagcaacggttcccattattaagttgatggactcgcacacagaggtgaaagtggac
atcagctttaatgtacagagtggtgtaaaagctgcaaacctcatcaaggactacaagcag
caatatcctgtgttaccgtacctggtgctggttttaaagcagtttttactgcagagagag
ctgaatgaggttttcacaggaggaatcggatcatacagtctgtttctcatggctgtcagc
ttcctacagctgcactgtagagaggacgtgagcagctcaaacccaaacttgggtgtactg
ctgattgagttttttgagctctatggacggcattttaactacctgaagacagggatcaga
atcaaagacggaggctcatatgtggccaaagatgaagtgcagaaaagcatgctggatgga
tacagaccgtctatgctttacattgaagatccattgcagccaggaaatgatgttgggcga
agttcatatggggcaatgcaggtgaaagaggcttttgattacgcttatgtcatcttaagt
catgccgtatccccaattgccaagtactaccccaacaacaagtcagaaagtattctgggt
cgaataatccgcgtcacacaggaggtggtggagtatcgtgactggatcagtgcgcagtgg
ggtcagaagagcagcaaggagcccgttctcaactgcaatgccaatgatctcacactgctg
gttgagcgtgaggagcttgatgagtgtaataataacctttcagaggacagtgtggtgtgt
acatctgtcccccgcagcaaagtgtcctccaactcttcgtctccttccccttcttctcct
tcatcaccgtcgtcatcctcctcttccccgtcttcaacggcctctagctcaagcgatgcg
gactctgatgggactccctataagacagccaaagctttgggtggaaggagtacctacagt
gagaatacagaaaggatctctaatcacagatcacaaaatcattcagcatccatttccacc
cccactcataagggcaataagagccggcagctcgctaacaaaagtactcaagggccgcac
aacaaccccaacaagatccagcagagcagcaagtctgtgaagtccaatgtaaagaagagg
aagcctcagcgagactcagcacatgaggacctgtgcagatag
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